RNA–Protein interactions for RNA: ENST00000276826.5

ARHGAP39-201, Transcript of Rho GTPase activating protein 39, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGAP39, Length 4,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39-201ENST00000276826 NISCHQ9Y2I1 1504 aa26.31■■□□□ 1.8
ARHGAP39-201ENST00000276826 DCAF8L2P0C7V8 631 aa25.97■■□□□ 1.75
ARHGAP39-201ENST00000276826 SUPT5HO00267 1087 aaKnown RBP25.35■■□□□ 1.65
ARHGAP39-201ENST00000276826 PELP1Q8IZL8 1130 aaKnown RBP24.67■■□□□ 1.54
ARHGAP39-201ENST00000276826 SHROOM4Q9ULL8 1493 aa24.65■■□□□ 1.54
ARHGAP39-201ENST00000276826 EHMT2Q96KQ7 1210 aa24.44■■□□□ 1.5
ARHGAP39-201ENST00000276826 PCGF6Q9BYE7 350 aa24.41■■□□□ 1.5
ARHGAP39-201ENST00000276826 CENPBP07199 599 aaPredicted RBP24.05■■□□□ 1.44
ARHGAP39-201ENST00000276826 ZEB1P37275 1124 aaPredicted RBP23.93■■□□□ 1.42
ARHGAP39-201ENST00000276826 FAM9AQ8IZU1 332 aaPredicted RBP23.89■■□□□ 1.42
ARHGAP39-201ENST00000276826 MYT1Q01538 1121 aa23.88■■□□□ 1.41
ARHGAP39-201ENST00000276826 APLP2Q06481 763 aa23.87■■□□□ 1.41
ARHGAP39-201ENST00000276826 TTBK1Q5TCY1 1321 aaPredicted RBP23.75■■□□□ 1.39
ARHGAP39-201ENST00000276826 CCER1Q8TC90 406 aaPredicted RBP23.68■■□□□ 1.38
ARHGAP39-201ENST00000276826 ERICH6Q7L0X2 663 aa23.66■■□□□ 1.38
ARHGAP39-201ENST00000276826 HRCP23327 699 aa23.5■■□□□ 1.35
ARHGAP39-201ENST00000276826 YTHDC1Q96MU7 727 aaKnown RBP23.42■■□□□ 1.34
ARHGAP39-201ENST00000276826 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
ARHGAP39-201ENST00000276826 NEFLP07196 543 aa23.25■■□□□ 1.31
ARHGAP39-201ENST00000276826 TRIM26Q12899 539 aaPredicted RBP23.23■■□□□ 1.31
ARHGAP39-201ENST00000276826 RANGAP1P46060 587 aaPredicted RBP23.13■■□□□ 1.29
ARHGAP39-201ENST00000276826 PPARGC1BQ86YN6 1023 aaKnown RBP23.05■■□□□ 1.28
ARHGAP39-201ENST00000276826 UBTFP17480 764 aaKnown RBP23.01■■□□□ 1.27
ARHGAP39-201ENST00000276826 LOC105371045A0A1W2PR82 267 aa22.82■■□□□ 1.24
ARHGAP39-201ENST00000276826 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
ARHGAP39-201ENST00000276826 ATP1B4Q9UN42 357 aaPredicted RBP22.78■■□□□ 1.24
ARHGAP39-201ENST00000276826 ABCC9O60706 1549 aa22.76■■□□□ 1.23
ARHGAP39-201ENST00000276826 DIEXFQ68CQ4 756 aaKnown RBP22.61■■□□□ 1.21
ARHGAP39-201ENST00000276826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.51■■□□□ 1.19
ARHGAP39-201ENST00000276826 HNRNPUL2Q1KMD3 747 aaKnown RBP22.48■■□□□ 1.19
ARHGAP39-201ENST00000276826 GTF3C3Q9Y5Q9 886 aa22.48■■□□□ 1.19
ARHGAP39-201ENST00000276826 DAXXQ9UER7 740 aaPredicted RBP22.45■■□□□ 1.18
ARHGAP39-201ENST00000276826 ITGAEP38570 1179 aa22.4■■□□□ 1.18
ARHGAP39-201ENST00000276826 PABPN1Q86U42 306 aaKnown RBP eCLIP22.33■■□□□ 1.17
ARHGAP39-201ENST00000276826 RTL5Q5HYW3 569 aaPredicted RBP22.29■■□□□ 1.16
ARHGAP39-201ENST00000276826 POLR3GLQ9BT43 218 aa22.21■■□□□ 1.15
ARHGAP39-201ENST00000276826 ACIN1Q9UKV3 1341 aaKnown RBP22.17■■□□□ 1.14
ARHGAP39-201ENST00000276826 BCANQ96GW7 911 aa22.13■■□□□ 1.13
ARHGAP39-201ENST00000276826 CNGB1Q14028 1251 aaPredicted RBP22.13■■□□□ 1.13
ARHGAP39-201ENST00000276826 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
ARHGAP39-201ENST00000276826 CDK11AQ9UQ88 783 aaPredicted RBP21.91■■□□□ 1.1
ARHGAP39-201ENST00000276826 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
ARHGAP39-201ENST00000276826 CLSPNQ9HAW4 1339 aa21.87■■□□□ 1.09
ARHGAP39-201ENST00000276826 ANP32CO43423 234 aa21.79■■□□□ 1.08
ARHGAP39-201ENST00000276826 ZCCHC6Q5VYS8 1495 aaKnown RBP21.78■■□□□ 1.08
ARHGAP39-201ENST00000276826 NEUROD1Q13562 356 aa21.76■■□□□ 1.07
ARHGAP39-201ENST00000276826 FAM50AQ14320 339 aaKnown RBP21.71■■□□□ 1.07
ARHGAP39-201ENST00000276826 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
ARHGAP39-201ENST00000276826 SCRIBQ14160 1630 aa21.63■■□□□ 1.05
ARHGAP39-201ENST00000276826 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
ARHGAP39-201ENST00000276826 ANP32AP39687 249 aaKnown RBP21.54■■□□□ 1.04
ARHGAP39-201ENST00000276826 MYT1LQ9UL68 1186 aa21.54■■□□□ 1.04
ARHGAP39-201ENST00000276826 FKBP8Q14318 412 aa21.53■■□□□ 1.04
ARHGAP39-201ENST00000276826 SLC4A1APQ9BWU0 796 aaKnown RBP21.48■■□□□ 1.03
ARHGAP39-201ENST00000276826 DCAF1Q9Y4B6 1507 aa21.45■■□□□ 1.02
ARHGAP39-201ENST00000276826 EIF5BO60841 1220 aaKnown RBP21.45■■□□□ 1.02
ARHGAP39-201ENST00000276826 RB1CC1Q8TDY2 1594 aa21.38■■□□□ 1.01
ARHGAP39-201ENST00000276826 ZNF326Q5BKZ1 582 aaKnown RBP21.38■■□□□ 1.01
ARHGAP39-201ENST00000276826 NPM2Q86SE8 214 aaKnown RBP21.37■■□□□ 1.01
ARHGAP39-201ENST00000276826 CSRNP3Q8WYN3 585 aa21.28■■□□□ 1
ARHGAP39-201ENST00000276826 HNRNPUQ00839 825 aaKnown RBP eCLIP21.26■□□□□ 0.99
ARHGAP39-201ENST00000276826 MIER1Q8N108 512 aa21.24■□□□□ 0.99
ARHGAP39-201ENST00000276826 DDX10Q13206 875 aaKnown RBP21.23■□□□□ 0.99
ARHGAP39-201ENST00000276826 NACADO15069 1562 aa21.23■□□□□ 0.99
ARHGAP39-201ENST00000276826 FBLN2P98095 1184 aa21.21■□□□□ 0.99
ARHGAP39-201ENST00000276826 NBR1Q14596 966 aa21.19■□□□□ 0.98
ARHGAP39-201ENST00000276826 CANXP27824 592 aaKnown RBP21.19■□□□□ 0.98
ARHGAP39-201ENST00000276826 ZBTB47Q9UFB7 747 aaPredicted RBP21.16■□□□□ 0.98
ARHGAP39-201ENST00000276826 GLIPR1L2Q4G1C9 344 aa21.09■□□□□ 0.97
ARHGAP39-201ENST00000276826 FAM9BQ8IZU0 186 aa21.08■□□□□ 0.96
ARHGAP39-201ENST00000276826 ANP32EQ9BTT0 268 aa21.08■□□□□ 0.96
ARHGAP39-201ENST00000276826 CCDC136Q96JN2 1154 aa21.07■□□□□ 0.96
ARHGAP39-201ENST00000276826 BCL11AQ9H165 835 aa21.06■□□□□ 0.96
ARHGAP39-201ENST00000276826 TONSLQ96HA7 1378 aa21.04■□□□□ 0.96
ARHGAP39-201ENST00000276826 P3H3Q8IVL6 736 aa21■□□□□ 0.95
ARHGAP39-201ENST00000276826 ANP32BQ92688 251 aaKnown RBP20.99■□□□□ 0.95
ARHGAP39-201ENST00000276826 IRX6P78412 446 aaPredicted RBP20.97■□□□□ 0.95
ARHGAP39-201ENST00000276826 UPF2Q9HAU5 1272 aaKnown RBP20.92■□□□□ 0.94
ARHGAP39-201ENST00000276826 HSP90AA1P07900 732 aaKnown RBP20.9■□□□□ 0.94
ARHGAP39-201ENST00000276826 SALL2Q9Y467 1007 aaPredicted RBP20.9■□□□□ 0.94
ARHGAP39-201ENST00000276826 RSF1Q96T23 1441 aaPredicted RBP20.88■□□□□ 0.93
ARHGAP39-201ENST00000276826 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
ARHGAP39-201ENST00000276826 MRS2Q9HD23 443 aa20.87■□□□□ 0.93
ARHGAP39-201ENST00000276826 TMC1Q8TDI8 760 aa20.84■□□□□ 0.93
ARHGAP39-201ENST00000276826 ARXQ96QS3 562 aa20.84■□□□□ 0.93
ARHGAP39-201ENST00000276826 NEFMP07197 916 aa20.84■□□□□ 0.93
ARHGAP39-201ENST00000276826 ARID3CA6NKF2 412 aa20.81■□□□□ 0.92
ARHGAP39-201ENST00000276826 HIRIP3Q9BW71 556 aaPredicted RBP20.81■□□□□ 0.92
ARHGAP39-201ENST00000276826 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
ARHGAP39-201ENST00000276826 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.73■□□□□ 0.91
ARHGAP39-201ENST00000276826 ZNF777Q9ULD5 760 aaPredicted RBP20.71■□□□□ 0.91
ARHGAP39-201ENST00000276826 SUPT16HQ9Y5B9 1047 aaKnown RBP20.71■□□□□ 0.91
ARHGAP39-201ENST00000276826 SLC24A1O60721 1099 aa20.69■□□□□ 0.9
ARHGAP39-201ENST00000276826 BAZ1AQ9NRL2 1556 aaPredicted RBP20.65■□□□□ 0.9
ARHGAP39-201ENST00000276826 CECR2Q9BXF3 1484 aa20.65■□□□□ 0.9
ARHGAP39-201ENST00000276826 DDRGK1Q96HY6 314 aa20.62■□□□□ 0.89
ARHGAP39-201ENST00000276826 CHIC2Q9UKJ5 165 aa20.6■□□□□ 0.89
ARHGAP39-201ENST00000276826 EIF4G2P78344 907 aaKnown RBP eCLIP20.6■□□□□ 0.89
ARHGAP39-201ENST00000276826 RTN4Q9NQC3 1192 aaKnown RBP20.58■□□□□ 0.89
ARHGAP39-201ENST00000276826 CLIP1P30622 1438 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms