RNA–Protein interactions for RNA: ENST00000616482.4

ANKHD1-221, Transcript of ankyrin repeat and KH domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene ANKHD1, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKHD1-221ENST00000616482 NISCHQ9Y2I1 1504 aa48.15■■■■■ 5.3
ANKHD1-221ENST00000616482 CCDC180Q9P1Z9 1646 aa41.6■■■■■ 4.25
ANKHD1-221ENST00000616482 ZCCHC6Q5VYS8 1495 aaKnown RBP40.53■■■■■ 4.08
ANKHD1-221ENST00000616482 SHROOM4Q9ULL8 1493 aa39.9■■■■□ 3.98
ANKHD1-221ENST00000616482 DCAF8L2P0C7V8 631 aa39.87■■■■□ 3.97
ANKHD1-221ENST00000616482 DCAF1Q9Y4B6 1507 aa39.65■■■■□ 3.94
ANKHD1-221ENST00000616482 ABCC9O60706 1549 aa39.21■■■■□ 3.87
ANKHD1-221ENST00000616482 MYO15BQ96JP2 1530 aa38.97■■■■□ 3.83
ANKHD1-221ENST00000616482 NACADO15069 1562 aa38.67■■■■□ 3.78
ANKHD1-221ENST00000616482 SUPT5HO00267 1087 aaKnown RBP38.59■■■■□ 3.77
ANKHD1-221ENST00000616482 SCRIBQ14160 1630 aa38.57■■■■□ 3.76
ANKHD1-221ENST00000616482 RB1CC1Q8TDY2 1594 aa38.26■■■■□ 3.71
ANKHD1-221ENST00000616482 RSF1Q96T23 1441 aaPredicted RBP37.6■■■■□ 3.61
ANKHD1-221ENST00000616482 UNC13AQ9UPW8 1703 aa37.6■■■■□ 3.61
ANKHD1-221ENST00000616482 CECR2Q9BXF3 1484 aa37.52■■■■□ 3.6
ANKHD1-221ENST00000616482 MROH2BQ7Z745 1585 aa37.31■■■■□ 3.56
ANKHD1-221ENST00000616482 BICRAQ9NZM4 1560 aa37.21■■■■□ 3.55
ANKHD1-221ENST00000616482 PABPN1Q86U42 306 aaKnown RBP eCLIP37.17■■■■□ 3.54
ANKHD1-221ENST00000616482 CHIC1Q5VXU3 224 aa37.12■■■■□ 3.53
ANKHD1-221ENST00000616482 BAZ1AQ9NRL2 1556 aaPredicted RBP37.08■■■■□ 3.53
ANKHD1-221ENST00000616482 WIZO95785 1651 aa37.03■■■■□ 3.52
ANKHD1-221ENST00000616482 SMARCA4P51532 1647 aa36.9■■■■□ 3.5
ANKHD1-221ENST00000616482 TOP2AP11388 1531 aaKnown RBP36.54■■■■□ 3.44
ANKHD1-221ENST00000616482 PEG3Q9GZU2 1588 aa36.34■■■■□ 3.41
ANKHD1-221ENST00000616482 CCDC88BA6NC98 1476 aa36.28■■■■□ 3.4
ANKHD1-221ENST00000616482 SMARCA2P51531 1590 aa36.27■■■■□ 3.4
ANKHD1-221ENST00000616482 ATAD2BQ9ULI0 1458 aa36.21■■■■□ 3.39
ANKHD1-221ENST00000616482 EIF4G1Q04637 1599 aaKnown RBP36.15■■■■□ 3.38
ANKHD1-221ENST00000616482 TRIM41Q8WV44 630 aa36.14■■■■□ 3.38
ANKHD1-221ENST00000616482 BAZ1BQ9UIG0 1483 aaKnown RBP36.02■■■■□ 3.36
ANKHD1-221ENST00000616482 LOC105371045A0A1W2PR82 267 aa35.85■■■■□ 3.33
ANKHD1-221ENST00000616482 NCAPD3P42695 1498 aa35.76■■■■□ 3.31
ANKHD1-221ENST00000616482 ABCC8Q09428 1581 aa35.74■■■■□ 3.31
ANKHD1-221ENST00000616482 HMGXB3Q12766 1538 aa35.7■■■■□ 3.31
ANKHD1-221ENST00000616482 FAM9AQ8IZU1 332 aaPredicted RBP35.66■■■■□ 3.3
ANKHD1-221ENST00000616482 CC2D2AQ9P2K1 1620 aa35.41■■■■□ 3.26
ANKHD1-221ENST00000616482 WRNQ14191 1432 aaPredicted RBP eCLIP35.35■■■■□ 3.25
ANKHD1-221ENST00000616482 EHMT2Q96KQ7 1210 aa35.26■■■■□ 3.24
ANKHD1-221ENST00000616482 SYNJ1O43426 1573 aa35.23■■■■□ 3.23
ANKHD1-221ENST00000616482 SOGA1O94964 1423 aa35.18■■■■□ 3.22
ANKHD1-221ENST00000616482 CFTRP13569 1480 aa35.12■■■■□ 3.21
ANKHD1-221ENST00000616482 PCGF6Q9BYE7 350 aa35.09■■■■□ 3.21
ANKHD1-221ENST00000616482 RUSC2Q8N2Y8 1516 aa35.06■■■■□ 3.2
ANKHD1-221ENST00000616482 EEA1Q15075 1411 aa34.96■■■■□ 3.19
ANKHD1-221ENST00000616482 TOP2BQ02880 1626 aa34.95■■■■□ 3.19
ANKHD1-221ENST00000616482 CADPSQ9ULU8 1353 aa34.93■■■■□ 3.18
ANKHD1-221ENST00000616482 CSRNP3Q8WYN3 585 aa34.9■■■■□ 3.18
ANKHD1-221ENST00000616482 BIVM-ERCC5R4GMW8 1640 aa34.88■■■■□ 3.17
ANKHD1-221ENST00000616482 PRDM2Q13029 1718 aa34.85■■■■□ 3.17
ANKHD1-221ENST00000616482 CUX1P39880 1505 aa34.83■■■■□ 3.17
ANKHD1-221ENST00000616482 HRCP23327 699 aa34.8■■■■□ 3.16
ANKHD1-221ENST00000616482 DNAJC5BQ9UF47 199 aa34.74■■■■□ 3.15
ANKHD1-221ENST00000616482 TRIM26Q12899 539 aaPredicted RBP34.67■■■■□ 3.14
ANKHD1-221ENST00000616482 NESP48681 1621 aa34.61■■■■□ 3.13
ANKHD1-221ENST00000616482 GOLGA3Q08378 1498 aa34.6■■■■□ 3.13
ANKHD1-221ENST00000616482 TNIKQ9UKE5 1360 aa34.6■■■■□ 3.13
ANKHD1-221ENST00000616482 FANCD2Q9BXW9 1451 aa34.56■■■■□ 3.12
ANKHD1-221ENST00000616482 UBTFP17480 764 aaKnown RBP34.55■■■■□ 3.12
ANKHD1-221ENST00000616482 CEP164Q9UPV0 1460 aa34.54■■■■□ 3.12
ANKHD1-221ENST00000616482 KIF21BO75037 1637 aa34.54■■■■□ 3.12
ANKHD1-221ENST00000616482 CEP162Q5TB80 1403 aa34.51■■■■□ 3.11
ANKHD1-221ENST00000616482 LAMC3Q9Y6N6 1575 aa34.42■■■■□ 3.1
ANKHD1-221ENST00000616482 RAPGEF2Q9Y4G8 1499 aa34.4■■■■□ 3.1
ANKHD1-221ENST00000616482 KIF27Q86VH2 1401 aa34.37■■■■□ 3.09
ANKHD1-221ENST00000616482 FGD5Q6ZNL6 1462 aa34.36■■■■□ 3.09
ANKHD1-221ENST00000616482 PRXQ9BXM0 1461 aa34.29■■■■□ 3.08
ANKHD1-221ENST00000616482 DNMBPQ6XZF7 1577 aa34.28■■■■□ 3.08
ANKHD1-221ENST00000616482 CUX2O14529 1486 aa34.25■■■■□ 3.07
ANKHD1-221ENST00000616482 TOPBP1Q92547 1522 aa34.24■■■■□ 3.07
ANKHD1-221ENST00000616482 PPARGC1BQ86YN6 1023 aaKnown RBP34.21■■■■□ 3.07
ANKHD1-221ENST00000616482 ERICH3Q5RHP9 1530 aa34.19■■■■□ 3.06
ANKHD1-221ENST00000616482 PDS5BQ9NTI5 1447 aa34.18■■■■□ 3.06
ANKHD1-221ENST00000616482 URB2Q14146 1524 aaKnown RBP34.14■■■■□ 3.06
ANKHD1-221ENST00000616482 POLA1P09884 1462 aaPredicted RBP34.13■■■■□ 3.05
ANKHD1-221ENST00000616482 CLIP1P30622 1438 aa34.12■■■■□ 3.05
ANKHD1-221ENST00000616482 RAD54L2Q9Y4B4 1467 aa34.11■■■■□ 3.05
ANKHD1-221ENST00000616482 IGF1RP08069 1367 aa34.1■■■■□ 3.05
ANKHD1-221ENST00000616482 KIF21AQ7Z4S6 1674 aa34.07■■■■□ 3.05
ANKHD1-221ENST00000616482 RANGAP1P46060 587 aaPredicted RBP34.02■■■■□ 3.04
ANKHD1-221ENST00000616482 ABCA10Q8WWZ4 1543 aa34■■■■□ 3.03
ANKHD1-221ENST00000616482 CARMIL1Q5VZK9 1371 aa33.91■■■■□ 3.02
ANKHD1-221ENST00000616482 VPS8Q8N3P4 1428 aa33.86■■■■□ 3.01
ANKHD1-221ENST00000616482 TTBK1Q5TCY1 1321 aaPredicted RBP33.84■■■■□ 3.01
ANKHD1-221ENST00000616482 WDR97A6NE52 1622 aa33.83■■■■□ 3.01
ANKHD1-221ENST00000616482 ARAP1Q96P48 1450 aa33.75■■■□□ 2.99
ANKHD1-221ENST00000616482 TDRD9Q8NDG6 1382 aaKnown RBP33.74■■■□□ 2.99
ANKHD1-221ENST00000616482 MRC2Q9UBG0 1479 aa33.74■■■□□ 2.99
ANKHD1-221ENST00000616482 ABCA5Q8WWZ7 1642 aa33.69■■■□□ 2.98
ANKHD1-221ENST00000616482 ZEB1P37275 1124 aaPredicted RBP33.67■■■□□ 2.98
ANKHD1-221ENST00000616482 TARBP1Q13395 1621 aaKnown RBP33.66■■■□□ 2.98
ANKHD1-221ENST00000616482 ARHGAP35Q9NRY4 1499 aa33.65■■■□□ 2.98
ANKHD1-221ENST00000616482 CUL7Q14999 1698 aa33.64■■■□□ 2.98
ANKHD1-221ENST00000616482 GAPVD1Q14C86 1478 aa33.63■■■□□ 2.97
ANKHD1-221ENST00000616482 APLP2Q06481 763 aa33.54■■■□□ 2.96
ANKHD1-221ENST00000616482 WDR62O43379 1518 aa33.52■■■□□ 2.96
ANKHD1-221ENST00000616482 ERCC6Q03468 1493 aa33.49■■■□□ 2.95
ANKHD1-221ENST00000616482 AQRO60306 1485 aaKnown RBP eCLIP33.44■■■□□ 2.945e-8■■■■■ 27.8
ANKHD1-221ENST00000616482 IFT140Q96RY7 1462 aa33.38■■■□□ 2.93
ANKHD1-221ENST00000616482 CTTNBP2Q8WZ74 1663 aa33.37■■■□□ 2.93
ANKHD1-221ENST00000616482 PBRM1Q86U86 1689 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms