RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 NISCHQ9Y2I1 1504 aa47.84■■■■■ 5.25
SOX17-201ENST00000297316 CCDC180Q9P1Z9 1646 aa41.52■■■■■ 4.24
SOX17-201ENST00000297316 ZCCHC6Q5VYS8 1495 aaKnown RBP40.21■■■■■ 4.03
SOX17-201ENST00000297316 DCAF8L2P0C7V8 631 aa39.74■■■■□ 3.95
SOX17-201ENST00000297316 SHROOM4Q9ULL8 1493 aa39.47■■■■□ 3.91
SOX17-201ENST00000297316 ABCC9O60706 1549 aa39.39■■■■□ 3.9
SOX17-201ENST00000297316 DCAF1Q9Y4B6 1507 aa39.38■■■■□ 3.9
SOX17-201ENST00000297316 MYO15BQ96JP2 1530 aa38.8■■■■□ 3.8
SOX17-201ENST00000297316 NACADO15069 1562 aa38.64■■■■□ 3.78
SOX17-201ENST00000297316 SCRIBQ14160 1630 aa38.46■■■■□ 3.75
SOX17-201ENST00000297316 RB1CC1Q8TDY2 1594 aa38.3■■■■□ 3.72
SOX17-201ENST00000297316 SUPT5HO00267 1087 aaKnown RBP38.01■■■■□ 3.68
SOX17-201ENST00000297316 UNC13AQ9UPW8 1703 aa37.74■■■■□ 3.63
SOX17-201ENST00000297316 CECR2Q9BXF3 1484 aa37.32■■■■□ 3.56
SOX17-201ENST00000297316 BICRAQ9NZM4 1560 aa37.28■■■■□ 3.56
SOX17-201ENST00000297316 PABPN1Q86U42 306 aaKnown RBP eCLIP37.27■■■■□ 3.56
SOX17-201ENST00000297316 RSF1Q96T23 1441 aaPredicted RBP37.24■■■■□ 3.55
SOX17-201ENST00000297316 MROH2BQ7Z745 1585 aa37.08■■■■□ 3.53
SOX17-201ENST00000297316 BAZ1AQ9NRL2 1556 aaPredicted RBP36.87■■■■□ 3.49
SOX17-201ENST00000297316 WIZO95785 1651 aa36.83■■■■□ 3.49
SOX17-201ENST00000297316 SMARCA4P51532 1647 aa36.76■■■■□ 3.48
SOX17-201ENST00000297316 CHIC1Q5VXU3 224 aa36.37■■■■□ 3.41
SOX17-201ENST00000297316 TOP2AP11388 1531 aaKnown RBP36.28■■■■□ 3.4
SOX17-201ENST00000297316 PEG3Q9GZU2 1588 aa36.19■■■■□ 3.38
SOX17-201ENST00000297316 ATAD2BQ9ULI0 1458 aa36.11■■■■□ 3.37
SOX17-201ENST00000297316 EIF4G1Q04637 1599 aaKnown RBP36.11■■■■□ 3.37
SOX17-201ENST00000297316 SMARCA2P51531 1590 aa36.02■■■■□ 3.36
SOX17-201ENST00000297316 CCDC88BA6NC98 1476 aa36.01■■■■□ 3.35
SOX17-201ENST00000297316 BAZ1BQ9UIG0 1483 aaKnown RBP35.92■■■■□ 3.34
SOX17-201ENST00000297316 NCAPD3P42695 1498 aa35.69■■■■□ 3.3
SOX17-201ENST00000297316 HMGXB3Q12766 1538 aa35.63■■■■□ 3.29
SOX17-201ENST00000297316 TRIM41Q8WV44 630 aa35.58■■■■□ 3.29
SOX17-201ENST00000297316 CC2D2AQ9P2K1 1620 aa35.58■■■■□ 3.29
SOX17-201ENST00000297316 ABCC8Q09428 1581 aa35.42■■■■□ 3.26
SOX17-201ENST00000297316 LOC105371045A0A1W2PR82 267 aa35.14■■■■□ 3.22
SOX17-201ENST00000297316 FAM9AQ8IZU1 332 aaPredicted RBP35.14■■■■□ 3.22
SOX17-201ENST00000297316 WRNQ14191 1432 aaPredicted RBP eCLIP35.02■■■■□ 3.2
SOX17-201ENST00000297316 CFTRP13569 1480 aa34.99■■■■□ 3.19
SOX17-201ENST00000297316 SYNJ1O43426 1573 aa34.95■■■■□ 3.18
SOX17-201ENST00000297316 DNAJC5BQ9UF47 199 aa34.9■■■■□ 3.18
SOX17-201ENST00000297316 CADPSQ9ULU8 1353 aa34.85■■■■□ 3.17
SOX17-201ENST00000297316 PRDM2Q13029 1718 aa34.81■■■■□ 3.16
SOX17-201ENST00000297316 EHMT2Q96KQ7 1210 aa34.79■■■■□ 3.16
SOX17-201ENST00000297316 SOGA1O94964 1423 aa34.77■■■■□ 3.16
SOX17-201ENST00000297316 RUSC2Q8N2Y8 1516 aa34.68■■■■□ 3.14
SOX17-201ENST00000297316 TOP2BQ02880 1626 aa34.68■■■■□ 3.14
SOX17-201ENST00000297316 NESP48681 1621 aa34.68■■■■□ 3.14
SOX17-201ENST00000297316 CUX1P39880 1505 aa34.63■■■■□ 3.13
SOX17-201ENST00000297316 BIVM-ERCC5R4GMW8 1640 aa34.63■■■■□ 3.13
SOX17-201ENST00000297316 FANCD2Q9BXW9 1451 aa34.5■■■■□ 3.11
SOX17-201ENST00000297316 LAMC3Q9Y6N6 1575 aa34.45■■■■□ 3.11
SOX17-201ENST00000297316 EEA1Q15075 1411 aa34.44■■■■□ 3.1
SOX17-201ENST00000297316 CSRNP3Q8WYN3 585 aa34.42■■■■□ 3.1
SOX17-201ENST00000297316 CEP164Q9UPV0 1460 aa34.23■■■■□ 3.07
SOX17-201ENST00000297316 FGD5Q6ZNL6 1462 aa34.22■■■■□ 3.07
SOX17-201ENST00000297316 KIF21AQ7Z4S6 1674 aa34.2■■■■□ 3.07
SOX17-201ENST00000297316 PDS5BQ9NTI5 1447 aa34.18■■■■□ 3.06
SOX17-201ENST00000297316 DNMBPQ6XZF7 1577 aa34.17■■■■□ 3.06
SOX17-201ENST00000297316 TOPBP1Q92547 1522 aa34.15■■■■□ 3.06
SOX17-201ENST00000297316 URB2Q14146 1524 aaKnown RBP34.11■■■■□ 3.05
SOX17-201ENST00000297316 GOLGA3Q08378 1498 aa34.1■■■■□ 3.05
SOX17-201ENST00000297316 KIF21BO75037 1637 aa34.09■■■■□ 3.05
SOX17-201ENST00000297316 UBTFP17480 764 aaKnown RBP34.08■■■■□ 3.05
SOX17-201ENST00000297316 KIF27Q86VH2 1401 aa34.07■■■■□ 3.04
SOX17-201ENST00000297316 PCGF6Q9BYE7 350 aa34.04■■■■□ 3.04
SOX17-201ENST00000297316 CUX2O14529 1486 aa34.04■■■■□ 3.04
SOX17-201ENST00000297316 POLA1P09884 1462 aaPredicted RBP34.02■■■■□ 3.04
SOX17-201ENST00000297316 TNIKQ9UKE5 1360 aa34.02■■■■□ 3.04
SOX17-201ENST00000297316 RAPGEF2Q9Y4G8 1499 aa34.02■■■■□ 3.04
SOX17-201ENST00000297316 RAD54L2Q9Y4B4 1467 aa34■■■■□ 3.03
SOX17-201ENST00000297316 CEP162Q5TB80 1403 aa33.94■■■■□ 3.02
SOX17-201ENST00000297316 PRXQ9BXM0 1461 aa33.91■■■■□ 3.02
SOX17-201ENST00000297316 ABCA10Q8WWZ4 1543 aa33.83■■■■□ 3.01
SOX17-201ENST00000297316 IGF1RP08069 1367 aa33.82■■■■□ 3
SOX17-201ENST00000297316 ERICH3Q5RHP9 1530 aa33.8■■■■□ 3
SOX17-201ENST00000297316 MRC2Q9UBG0 1479 aa33.77■■■■□ 3
SOX17-201ENST00000297316 WDR97A6NE52 1622 aa33.75■■■□□ 2.99
SOX17-201ENST00000297316 TRIM26Q12899 539 aaPredicted RBP33.72■■■□□ 2.99
SOX17-201ENST00000297316 RANGAP1P46060 587 aaPredicted RBP33.69■■■□□ 2.98
SOX17-201ENST00000297316 ERCC6Q03468 1493 aa33.67■■■□□ 2.98
SOX17-201ENST00000297316 TDRD9Q8NDG6 1382 aaKnown RBP33.65■■■□□ 2.98
SOX17-201ENST00000297316 CARMIL1Q5VZK9 1371 aa33.64■■■□□ 2.98
SOX17-201ENST00000297316 TARBP1Q13395 1621 aaKnown RBP33.63■■■□□ 2.97
SOX17-201ENST00000297316 CLIP1P30622 1438 aa33.62■■■□□ 2.97
SOX17-201ENST00000297316 PPARGC1BQ86YN6 1023 aaKnown RBP33.59■■■□□ 2.97
SOX17-201ENST00000297316 WDR62O43379 1518 aa33.58■■■□□ 2.97
SOX17-201ENST00000297316 ABCA5Q8WWZ7 1642 aa33.57■■■□□ 2.97
SOX17-201ENST00000297316 GAPVD1Q14C86 1478 aa33.51■■■□□ 2.96
SOX17-201ENST00000297316 THOC2Q8NI27 1593 aaKnown RBP33.5■■■□□ 2.95
SOX17-201ENST00000297316 CUL7Q14999 1698 aa33.44■■■□□ 2.94
SOX17-201ENST00000297316 HRCP23327 699 aa33.42■■■□□ 2.94
SOX17-201ENST00000297316 AQRO60306 1485 aaKnown RBP eCLIP33.41■■■□□ 2.94
SOX17-201ENST00000297316 ZNF608Q9ULD9 1512 aaPredicted RBP33.36■■■□□ 2.93
SOX17-201ENST00000297316 IFT140Q96RY7 1462 aa33.35■■■□□ 2.93
SOX17-201ENST00000297316 PBRM1Q86U86 1689 aa33.34■■■□□ 2.93
SOX17-201ENST00000297316 VPS8Q8N3P4 1428 aa33.31■■■□□ 2.92
SOX17-201ENST00000297316 ARAP1Q96P48 1450 aa33.3■■■□□ 2.92
SOX17-201ENST00000297316 TTBK1Q5TCY1 1321 aaPredicted RBP33.3■■■□□ 2.92
SOX17-201ENST00000297316 ARHGAP35Q9NRY4 1499 aa33.26■■■□□ 2.91
SOX17-201ENST00000297316 GRIN2BQ13224 1484 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms