Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SETD9Q8NE22 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SETD9Q8NE22 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SETD9Q8NE22 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SETD9Q8NE22 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SETD9Q8NE22 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
SETD9Q8NE22 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SETD9Q8NE22 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SETD9Q8NE22 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SETD9Q8NE22 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SETD9Q8NE22 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SETD9Q8NE22 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SETD9Q8NE22 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.21■□□□□ 0.67
SETD9Q8NE22 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SETD9Q8NE22 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SETD9Q8NE22 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SETD9Q8NE22 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SETD9Q8NE22 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SETD9Q8NE22 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SETD9Q8NE22 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SETD9Q8NE22 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SETD9Q8NE22 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SETD9Q8NE22 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.21■□□□□ 0.67
SETD9Q8NE22 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SETD9Q8NE22 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.21■□□□□ 0.67
SETD9Q8NE22 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SETD9Q8NE22 PCDHAC2-203ENST00000615316 3011 ntBASIC19.21■□□□□ 0.67
SETD9Q8NE22 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SETD9Q8NE22 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SETD9Q8NE22 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.21■□□□□ 0.66
SETD9Q8NE22 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SETD9Q8NE22 AC020907.5-201ENST00000624372 1936 ntBASIC19.2■□□□□ 0.66
SETD9Q8NE22 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 AC003102.1-202ENST00000563394 1796 ntBASIC19.2■□□□□ 0.66
SETD9Q8NE22 AC027702.1-201ENST00000563810 1770 ntBASIC19.2■□□□□ 0.66
SETD9Q8NE22 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.2■□□□□ 0.66
SETD9Q8NE22 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.2■□□□□ 0.66
SETD9Q8NE22 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 AC087239.1-201ENST00000622671 572 ntBASIC19.2■□□□□ 0.66
SETD9Q8NE22 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SETD9Q8NE22 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SETD9Q8NE22 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.2■□□□□ 0.66
SETD9Q8NE22 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SETD9Q8NE22 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SETD9Q8NE22 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SETD9Q8NE22 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.19■□□□□ 0.66
SETD9Q8NE22 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SETD9Q8NE22 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SETD9Q8NE22 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SETD9Q8NE22 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.19■□□□□ 0.66
SETD9Q8NE22 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.19■□□□□ 0.66
SETD9Q8NE22 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SETD9Q8NE22 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SETD9Q8NE22 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
SETD9Q8NE22 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SETD9Q8NE22 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SETD9Q8NE22 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SETD9Q8NE22 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SETD9Q8NE22 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SETD9Q8NE22 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.19■□□□□ 0.66
SETD9Q8NE22 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SETD9Q8NE22 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.19■□□□□ 0.66
SETD9Q8NE22 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
SETD9Q8NE22 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SETD9Q8NE22 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SETD9Q8NE22 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
SETD9Q8NE22 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SETD9Q8NE22 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.18■□□□□ 0.66
SETD9Q8NE22 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SETD9Q8NE22 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.18■□□□□ 0.66
SETD9Q8NE22 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SETD9Q8NE22 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.18■□□□□ 0.66
SETD9Q8NE22 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SETD9Q8NE22 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SETD9Q8NE22 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SETD9Q8NE22 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SETD9Q8NE22 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.17■□□□□ 0.66
SETD9Q8NE22 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SETD9Q8NE22 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.17■□□□□ 0.66
SETD9Q8NE22 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
SETD9Q8NE22 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SETD9Q8NE22 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SETD9Q8NE22 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SETD9Q8NE22 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SETD9Q8NE22 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.17■□□□□ 0.66
SETD9Q8NE22 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.17■□□□□ 0.66
SETD9Q8NE22 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SETD9Q8NE22 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms