RNA–Protein interactions for RNA: ENST00000328735.10

BACE2-201, Transcript of beta-secretase 2, humanhuman

TSL 1 (best) BASIC

Gene BACE2, Length 2,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BACE2-201ENST00000328735 NISCHQ9Y2I1 1504 aa39.12■■■■□ 3.85
BACE2-201ENST00000328735 SHROOM4Q9ULL8 1493 aa34.19■■■■□ 3.06
BACE2-201ENST00000328735 SUPT5HO00267 1087 aaKnown RBP33.78■■■■□ 3
BACE2-201ENST00000328735 ZCCHC6Q5VYS8 1495 aaKnown RBP33.17■■■□□ 2.9
BACE2-201ENST00000328735 MYO15BQ96JP2 1530 aa33.02■■■□□ 2.88
BACE2-201ENST00000328735 CHIC1Q5VXU3 224 aa32.96■■■□□ 2.87
BACE2-201ENST00000328735 HRCP23327 699 aa32.87■■■□□ 2.85
BACE2-201ENST00000328735 DCAF8L2P0C7V8 631 aa32.76■■■□□ 2.84
BACE2-201ENST00000328735 CCDC180Q9P1Z9 1646 aa32.75■■■□□ 2.83
BACE2-201ENST00000328735 PCGF6Q9BYE7 350 aa32.64■■■□□ 2.82
BACE2-201ENST00000328735 PPARGC1BQ86YN6 1023 aaKnown RBP32.35■■■□□ 2.77
BACE2-201ENST00000328735 LOC105371045A0A1W2PR82 267 aa32.2■■■□□ 2.74
BACE2-201ENST00000328735 DCAF1Q9Y4B6 1507 aa32■■■□□ 2.71
BACE2-201ENST00000328735 TRIM26Q12899 539 aaPredicted RBP31.68■■■□□ 2.66
BACE2-201ENST00000328735 ABCC9O60706 1549 aa31.38■■■□□ 2.61
BACE2-201ENST00000328735 RSF1Q96T23 1441 aaPredicted RBP31.28■■■□□ 2.6
BACE2-201ENST00000328735 TRIM41Q8WV44 630 aa31.27■■■□□ 2.6
BACE2-201ENST00000328735 FAM9AQ8IZU1 332 aaPredicted RBP31.26■■■□□ 2.6
BACE2-201ENST00000328735 SCRIBQ14160 1630 aa31.15■■■□□ 2.58
BACE2-201ENST00000328735 EHMT2Q96KQ7 1210 aa31.15■■■□□ 2.58
BACE2-201ENST00000328735 ZEB1P37275 1124 aaPredicted RBP31.09■■■□□ 2.57
BACE2-201ENST00000328735 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
BACE2-201ENST00000328735 SCAF1Q9H7N4 1312 aaKnown RBP30.74■■■□□ 2.51
BACE2-201ENST00000328735 CECR2Q9BXF3 1484 aa30.68■■■□□ 2.5
BACE2-201ENST00000328735 PELP1Q8IZL8 1130 aaKnown RBP30.63■■■□□ 2.49
BACE2-201ENST00000328735 MROH2BQ7Z745 1585 aa30.56■■■□□ 2.48
BACE2-201ENST00000328735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.52■■■□□ 2.48
BACE2-201ENST00000328735 WIZO95785 1651 aa30.42■■■□□ 2.46
BACE2-201ENST00000328735 CCER1Q8TC90 406 aaPredicted RBP30.37■■■□□ 2.45
BACE2-201ENST00000328735 NACADO15069 1562 aa30.31■■■□□ 2.44
BACE2-201ENST00000328735 TTBK1Q5TCY1 1321 aaPredicted RBP30.25■■■□□ 2.43
BACE2-201ENST00000328735 NEUROD1Q13562 356 aa30.18■■■□□ 2.42
BACE2-201ENST00000328735 ACIN1Q9UKV3 1341 aaKnown RBP30.16■■■□□ 2.42
BACE2-201ENST00000328735 BAZ1AQ9NRL2 1556 aaPredicted RBP30.11■■■□□ 2.41
BACE2-201ENST00000328735 EIF4G1Q04637 1599 aaKnown RBP30.09■■■□□ 2.41
BACE2-201ENST00000328735 DIEXFQ68CQ4 756 aaKnown RBP30.07■■■□□ 2.4
BACE2-201ENST00000328735 ABCC8Q09428 1581 aa30.03■■■□□ 2.4
BACE2-201ENST00000328735 CCDC88BA6NC98 1476 aa30.01■■■□□ 2.4
BACE2-201ENST00000328735 CEP162Q5TB80 1403 aa29.92■■■□□ 2.38
BACE2-201ENST00000328735 GTF3C3Q9Y5Q9 886 aa29.92■■■□□ 2.38
BACE2-201ENST00000328735 WRNQ14191 1432 aaPredicted RBP eCLIP29.89■■■□□ 2.38
BACE2-201ENST00000328735 SOGA1O94964 1423 aa29.88■■■□□ 2.37
BACE2-201ENST00000328735 CENPBP07199 599 aaPredicted RBP29.81■■■□□ 2.36
BACE2-201ENST00000328735 TOP2AP11388 1531 aaKnown RBP29.78■■■□□ 2.36
BACE2-201ENST00000328735 UBTFP17480 764 aaKnown RBP29.76■■■□□ 2.35
BACE2-201ENST00000328735 TNIKQ9UKE5 1360 aa29.75■■■□□ 2.35
BACE2-201ENST00000328735 RUSC2Q8N2Y8 1516 aa29.75■■■□□ 2.35
BACE2-201ENST00000328735 PABPN1Q86U42 306 aaKnown RBP eCLIP29.74■■■□□ 2.35
BACE2-201ENST00000328735 SMARCA2P51531 1590 aa29.71■■■□□ 2.35
BACE2-201ENST00000328735 CSRNP3Q8WYN3 585 aa29.71■■■□□ 2.35
BACE2-201ENST00000328735 SMARCA4P51532 1647 aa29.66■■■□□ 2.34
BACE2-201ENST00000328735 ZNF316A6NFI3 1004 aaPredicted RBP29.63■■■□□ 2.33
BACE2-201ENST00000328735 UNC13AQ9UPW8 1703 aa29.57■■■□□ 2.32
BACE2-201ENST00000328735 YTHDC1Q96MU7 727 aaKnown RBP29.56■■■□□ 2.32
BACE2-201ENST00000328735 HNRNPUL2Q1KMD3 747 aaKnown RBP29.51■■■□□ 2.31
BACE2-201ENST00000328735 EEA1Q15075 1411 aa29.51■■■□□ 2.31
BACE2-201ENST00000328735 GOLGA3Q08378 1498 aa29.46■■■□□ 2.31
BACE2-201ENST00000328735 MIER1Q8N108 512 aa29.41■■■□□ 2.3
BACE2-201ENST00000328735 MYT1Q01538 1121 aa29.28■■■□□ 2.28
BACE2-201ENST00000328735 RANGAP1P46060 587 aaPredicted RBP29.25■■■□□ 2.27
BACE2-201ENST00000328735 CLIP1P30622 1438 aa29.24■■■□□ 2.27
BACE2-201ENST00000328735 CEP164Q9UPV0 1460 aa29.22■■■□□ 2.27
BACE2-201ENST00000328735 BICRAQ9NZM4 1560 aa29.21■■■□□ 2.27
BACE2-201ENST00000328735 SYNJ1O43426 1573 aa29.19■■■□□ 2.26
BACE2-201ENST00000328735 VPS8Q8N3P4 1428 aa29.13■■■□□ 2.25
BACE2-201ENST00000328735 APLP2Q06481 763 aa29.12■■■□□ 2.25
BACE2-201ENST00000328735 KIF21BO75037 1637 aa29.11■■■□□ 2.25
BACE2-201ENST00000328735 RAPGEF2Q9Y4G8 1499 aa29.08■■■□□ 2.25
BACE2-201ENST00000328735 PEG3Q9GZU2 1588 aa28.93■■■□□ 2.22
BACE2-201ENST00000328735 BAZ1BQ9UIG0 1483 aaKnown RBP28.92■■■□□ 2.22
BACE2-201ENST00000328735 DHX57Q6P158 1386 aaKnown RBP28.83■■■□□ 2.21
BACE2-201ENST00000328735 ATAD2BQ9ULI0 1458 aa28.83■■■□□ 2.21
BACE2-201ENST00000328735 KANK4Q5T7N3 995 aaPredicted RBP28.8■■■□□ 2.2
BACE2-201ENST00000328735 CLSPNQ9HAW4 1339 aa28.71■■■□□ 2.19
BACE2-201ENST00000328735 ARAP1Q96P48 1450 aa28.68■■■□□ 2.18
BACE2-201ENST00000328735 TOP2BQ02880 1626 aa28.66■■■□□ 2.18
BACE2-201ENST00000328735 SUPT16HQ9Y5B9 1047 aaKnown RBP28.64■■■□□ 2.17
BACE2-201ENST00000328735 PRXQ9BXM0 1461 aa28.6■■■□□ 2.17
BACE2-201ENST00000328735 ITGAEP38570 1179 aa28.57■■■□□ 2.16
BACE2-201ENST00000328735 ERICH3Q5RHP9 1530 aa28.53■■■□□ 2.16
BACE2-201ENST00000328735 RRBP1Q9P2E9 1410 aaKnown RBP28.51■■■□□ 2.15
BACE2-201ENST00000328735 BIVM-ERCC5R4GMW8 1640 aa28.49■■■□□ 2.15
BACE2-201ENST00000328735 KCNH8Q96L42 1107 aa28.47■■■□□ 2.15
BACE2-201ENST00000328735 CCNB3Q8WWL7 1395 aa28.43■■■□□ 2.14
BACE2-201ENST00000328735 CUX1P39880 1505 aa28.37■■■□□ 2.13
BACE2-201ENST00000328735 CUX2O14529 1486 aa28.35■■■□□ 2.13
BACE2-201ENST00000328735 ARHGAP35Q9NRY4 1499 aa28.35■■■□□ 2.13
BACE2-201ENST00000328735 KIF27Q86VH2 1401 aa28.35■■■□□ 2.13
BACE2-201ENST00000328735 TSHZ2Q9NRE2 1034 aa28.32■■■□□ 2.12
BACE2-201ENST00000328735 RAB3GAP2Q9H2M9 1393 aa28.31■■■□□ 2.12
BACE2-201ENST00000328735 MAPKBP1O60336 1514 aa28.23■■■□□ 2.11
BACE2-201ENST00000328735 BCANQ96GW7 911 aa28.2■■■□□ 2.1
BACE2-201ENST00000328735 SIN3AQ96ST3 1273 aa28.19■■■□□ 2.1
BACE2-201ENST00000328735 DDX10Q13206 875 aaKnown RBP28.19■■■□□ 2.1
BACE2-201ENST00000328735 NCAPD3P42695 1498 aa28.12■■■□□ 2.09
BACE2-201ENST00000328735 FAM50AQ14320 339 aaKnown RBP28.1■■■□□ 2.09
BACE2-201ENST00000328735 HIRIP3Q9BW71 556 aaPredicted RBP28.1■■■□□ 2.09
BACE2-201ENST00000328735 SETD5Q9C0A6 1442 aa28.09■■■□□ 2.09
BACE2-201ENST00000328735 WDR97A6NE52 1622 aa28.09■■■□□ 2.09
BACE2-201ENST00000328735 PHLDB1Q86UU1 1377 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms