RNA–Protein interactions for RNA: ENST00000590161.2

PALM-207, Transcript of paralemmin, humanhuman

TSL 4 BASIC

Gene PALM, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM-207ENST00000590161 NISCHQ9Y2I1 1504 aa47.34■■■■■ 5.17
PALM-207ENST00000590161 CCDC180Q9P1Z9 1646 aa41.13■■■■■ 4.17
PALM-207ENST00000590161 ZCCHC6Q5VYS8 1495 aaKnown RBP39.74■■■■□ 3.95
PALM-207ENST00000590161 DCAF8L2P0C7V8 631 aa39.49■■■■□ 3.91
PALM-207ENST00000590161 ABCC9O60706 1549 aa39.27■■■■□ 3.88
PALM-207ENST00000590161 SHROOM4Q9ULL8 1493 aa38.98■■■■□ 3.83
PALM-207ENST00000590161 DCAF1Q9Y4B6 1507 aa38.96■■■■□ 3.83
PALM-207ENST00000590161 MYO15BQ96JP2 1530 aa38.46■■■■□ 3.75
PALM-207ENST00000590161 NACADO15069 1562 aa38.36■■■■□ 3.73
PALM-207ENST00000590161 SCRIBQ14160 1630 aa38.12■■■■□ 3.69
PALM-207ENST00000590161 RB1CC1Q8TDY2 1594 aa38.09■■■■□ 3.69
PALM-207ENST00000590161 SUPT5HO00267 1087 aaKnown RBP37.46■■■■□ 3.59
PALM-207ENST00000590161 UNC13AQ9UPW8 1703 aa37.42■■■■□ 3.58
PALM-207ENST00000590161 PABPN1Q86U42 306 aaKnown RBP eCLIP37.14■■■■□ 3.54
PALM-207ENST00000590161 BICRAQ9NZM4 1560 aa37.03■■■■□ 3.52
PALM-207ENST00000590161 CECR2Q9BXF3 1484 aa36.95■■■■□ 3.51
PALM-207ENST00000590161 RSF1Q96T23 1441 aaPredicted RBP36.79■■■■□ 3.48
PALM-207ENST00000590161 MROH2BQ7Z745 1585 aa36.68■■■■□ 3.46
PALM-207ENST00000590161 BAZ1AQ9NRL2 1556 aaPredicted RBP36.52■■■■□ 3.44
PALM-207ENST00000590161 SMARCA4P51532 1647 aa36.4■■■■□ 3.42
PALM-207ENST00000590161 WIZO95785 1651 aa36.4■■■■□ 3.42
PALM-207ENST00000590161 EIF4G1Q04637 1599 aaKnown RBP35.91■■■■□ 3.34
PALM-207ENST00000590161 TOP2AP11388 1531 aaKnown RBP35.88■■■■□ 3.33
PALM-207ENST00000590161 PEG3Q9GZU2 1588 aa35.84■■■■□ 3.33
PALM-207ENST00000590161 ATAD2BQ9ULI0 1458 aa35.84■■■■□ 3.33
PALM-207ENST00000590161 SMARCA2P51531 1590 aa35.72■■■■□ 3.31
PALM-207ENST00000590161 CHIC1Q5VXU3 224 aa35.7■■■■□ 3.31
PALM-207ENST00000590161 BAZ1BQ9UIG0 1483 aaKnown RBP35.65■■■■□ 3.3
PALM-207ENST00000590161 CCDC88BA6NC98 1476 aa35.62■■■■□ 3.29
PALM-207ENST00000590161 NCAPD3P42695 1498 aa35.45■■■■□ 3.27
PALM-207ENST00000590161 CC2D2AQ9P2K1 1620 aa35.43■■■■□ 3.26
PALM-207ENST00000590161 HMGXB3Q12766 1538 aa35.36■■■■□ 3.25
PALM-207ENST00000590161 TRIM41Q8WV44 630 aa35.08■■■■□ 3.21
PALM-207ENST00000590161 ABCC8Q09428 1581 aa34.96■■■■□ 3.19
PALM-207ENST00000590161 DNAJC5BQ9UF47 199 aa34.84■■■■□ 3.17
PALM-207ENST00000590161 CFTRP13569 1480 aa34.7■■■■□ 3.15
PALM-207ENST00000590161 FAM9AQ8IZU1 332 aaPredicted RBP34.64■■■■□ 3.14
PALM-207ENST00000590161 CADPSQ9ULU8 1353 aa34.62■■■■□ 3.13
PALM-207ENST00000590161 WRNQ14191 1432 aaPredicted RBP eCLIP34.62■■■■□ 3.13
PALM-207ENST00000590161 SYNJ1O43426 1573 aa34.51■■■■□ 3.12
PALM-207ENST00000590161 LOC105371045A0A1W2PR82 267 aa34.5■■■■□ 3.11
PALM-207ENST00000590161 NESP48681 1621 aa34.49■■■■□ 3.11
PALM-207ENST00000590161 PRDM2Q13029 1718 aa34.42■■■■□ 3.1
PALM-207ENST00000590161 EHMT2Q96KQ7 1210 aa34.32■■■■□ 3.08
PALM-207ENST00000590161 SOGA1O94964 1423 aa34.29■■■■□ 3.08
PALM-207ENST00000590161 CUX1P39880 1505 aa34.27■■■■□ 3.08
PALM-207ENST00000590161 TOP2BQ02880 1626 aa34.27■■■■□ 3.08
PALM-207ENST00000590161 FANCD2Q9BXW9 1451 aa34.27■■■■□ 3.08
PALM-207ENST00000590161 LAMC3Q9Y6N6 1575 aa34.23■■■■□ 3.07
PALM-207ENST00000590161 RUSC2Q8N2Y8 1516 aa34.21■■■■□ 3.07
PALM-207ENST00000590161 BIVM-ERCC5R4GMW8 1640 aa34.2■■■■□ 3.07
PALM-207ENST00000590161 PDS5BQ9NTI5 1447 aa34.03■■■■□ 3.04
PALM-207ENST00000590161 CEP164Q9UPV0 1460 aa34.02■■■■□ 3.04
PALM-207ENST00000590161 KIF21AQ7Z4S6 1674 aa33.97■■■■□ 3.03
PALM-207ENST00000590161 CSRNP3Q8WYN3 585 aa33.97■■■■□ 3.03
PALM-207ENST00000590161 EEA1Q15075 1411 aa33.94■■■■□ 3.02
PALM-207ENST00000590161 FGD5Q6ZNL6 1462 aa33.91■■■■□ 3.02
PALM-207ENST00000590161 TOPBP1Q92547 1522 aa33.89■■■■□ 3.02
PALM-207ENST00000590161 DNMBPQ6XZF7 1577 aa33.88■■■■□ 3.01
PALM-207ENST00000590161 URB2Q14146 1524 aaKnown RBP33.87■■■■□ 3.01
PALM-207ENST00000590161 POLA1P09884 1462 aaPredicted RBP33.74■■■□□ 2.99
PALM-207ENST00000590161 RAD54L2Q9Y4B4 1467 aa33.73■■■□□ 2.99
PALM-207ENST00000590161 CUX2O14529 1486 aa33.71■■■□□ 2.99
PALM-207ENST00000590161 KIF27Q86VH2 1401 aa33.7■■■□□ 2.99
PALM-207ENST00000590161 UBTFP17480 764 aaKnown RBP33.64■■■□□ 2.98
PALM-207ENST00000590161 ERCC6Q03468 1493 aa33.61■■■□□ 2.97
PALM-207ENST00000590161 GOLGA3Q08378 1498 aa33.6■■■□□ 2.97
PALM-207ENST00000590161 MRC2Q9UBG0 1479 aa33.6■■■□□ 2.97
PALM-207ENST00000590161 KIF21BO75037 1637 aa33.57■■■□□ 2.96
PALM-207ENST00000590161 RAPGEF2Q9Y4G8 1499 aa33.56■■■□□ 2.96
PALM-207ENST00000590161 ABCA10Q8WWZ4 1543 aa33.51■■■□□ 2.96
PALM-207ENST00000590161 TNIKQ9UKE5 1360 aa33.48■■■□□ 2.95
PALM-207ENST00000590161 IGF1RP08069 1367 aa33.47■■■□□ 2.95
PALM-207ENST00000590161 PRXQ9BXM0 1461 aa33.46■■■□□ 2.95
PALM-207ENST00000590161 TDRD9Q8NDG6 1382 aaKnown RBP33.42■■■□□ 2.94
PALM-207ENST00000590161 WDR62O43379 1518 aa33.39■■■□□ 2.94
PALM-207ENST00000590161 CEP162Q5TB80 1403 aa33.39■■■□□ 2.94
PALM-207ENST00000590161 WDR97A6NE52 1622 aa33.39■■■□□ 2.94
PALM-207ENST00000590161 TARBP1Q13395 1621 aaKnown RBP33.34■■■□□ 2.93
PALM-207ENST00000590161 THOC2Q8NI27 1593 aaKnown RBP33.34■■■□□ 2.93
PALM-207ENST00000590161 RANGAP1P46060 587 aaPredicted RBP33.32■■■□□ 2.93
PALM-207ENST00000590161 ERICH3Q5RHP9 1530 aa33.32■■■□□ 2.93
PALM-207ENST00000590161 CARMIL1Q5VZK9 1371 aa33.3■■■□□ 2.92
PALM-207ENST00000590161 ABCA5Q8WWZ7 1642 aa33.25■■■□□ 2.91
PALM-207ENST00000590161 GAPVD1Q14C86 1478 aa33.25■■■□□ 2.91
PALM-207ENST00000590161 AQRO60306 1485 aaKnown RBP eCLIP33.2■■■□□ 2.91
PALM-207ENST00000590161 ZNF608Q9ULD9 1512 aaPredicted RBP33.16■■■□□ 2.9
PALM-207ENST00000590161 IFT140Q96RY7 1462 aa33.16■■■□□ 2.9
PALM-207ENST00000590161 CLIP1P30622 1438 aa33.12■■■□□ 2.89
PALM-207ENST00000590161 CUL7Q14999 1698 aa33.07■■■□□ 2.88
PALM-207ENST00000590161 PBRM1Q86U86 1689 aa33.03■■■□□ 2.88
PALM-207ENST00000590161 PPARGC1BQ86YN6 1023 aaKnown RBP33.02■■■□□ 2.88
PALM-207ENST00000590161 EIF4G3O43432 1585 aaKnown RBP32.95■■■□□ 2.86
PALM-207ENST00000590161 GRIN2BQ13224 1484 aa32.94■■■□□ 2.86
PALM-207ENST00000590161 PCGF6Q9BYE7 350 aa32.86■■■□□ 2.85
PALM-207ENST00000590161 FHAD1B1AJZ9 1412 aa32.83■■■□□ 2.85
PALM-207ENST00000590161 ADAMTS12P58397 1594 aa32.83■■■□□ 2.85
PALM-207ENST00000590161 SNAPC4Q5SXM2 1469 aa32.82■■■□□ 2.84
PALM-207ENST00000590161 ARAP1Q96P48 1450 aa32.8■■■□□ 2.84
PALM-207ENST00000590161 ARHGAP35Q9NRY4 1499 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms