Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
GAR1Q9NY12 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.28■■□□□ 1
GAR1Q9NY12 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GAR1Q9NY12 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GAR1Q9NY12 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GAR1Q9NY12 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GAR1Q9NY12 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GAR1Q9NY12 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GAR1Q9NY12 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GAR1Q9NY12 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
GAR1Q9NY12 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GAR1Q9NY12 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
GAR1Q9NY12 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
GAR1Q9NY12 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GAR1Q9NY12 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.23■□□□□ 0.99
GAR1Q9NY12 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
GAR1Q9NY12 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GAR1Q9NY12 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
GAR1Q9NY12 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GAR1Q9NY12 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.2■□□□□ 0.98
GAR1Q9NY12 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.2■□□□□ 0.98
GAR1Q9NY12 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.2■□□□□ 0.98
GAR1Q9NY12 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GAR1Q9NY12 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
GAR1Q9NY12 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GAR1Q9NY12 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.19■□□□□ 0.98
GAR1Q9NY12 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.18■□□□□ 0.98
GAR1Q9NY12 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GAR1Q9NY12 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GAR1Q9NY12 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
GAR1Q9NY12 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GAR1Q9NY12 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GAR1Q9NY12 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GAR1Q9NY12 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GAR1Q9NY12 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GAR1Q9NY12 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GAR1Q9NY12 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
GAR1Q9NY12 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.14■□□□□ 0.97
GAR1Q9NY12 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GAR1Q9NY12 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GAR1Q9NY12 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GAR1Q9NY12 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.13■□□□□ 0.97
GAR1Q9NY12 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
GAR1Q9NY12 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.12■□□□□ 0.97
GAR1Q9NY12 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.12■□□□□ 0.97
GAR1Q9NY12 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GAR1Q9NY12 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
GAR1Q9NY12 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.11■□□□□ 0.97
GAR1Q9NY12 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GAR1Q9NY12 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.1■□□□□ 0.97
GAR1Q9NY12 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GAR1Q9NY12 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.09■□□□□ 0.97
GAR1Q9NY12 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
GAR1Q9NY12 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
GAR1Q9NY12 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.08■□□□□ 0.97
GAR1Q9NY12 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.08■□□□□ 0.97
GAR1Q9NY12 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.08■□□□□ 0.96
GAR1Q9NY12 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GAR1Q9NY12 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GAR1Q9NY12 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
GAR1Q9NY12 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GAR1Q9NY12 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GAR1Q9NY12 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GAR1Q9NY12 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
GAR1Q9NY12 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.04■□□□□ 0.96
GAR1Q9NY12 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GAR1Q9NY12 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GAR1Q9NY12 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GAR1Q9NY12 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
GAR1Q9NY12 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GAR1Q9NY12 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GAR1Q9NY12 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GAR1Q9NY12 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GAR1Q9NY12 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.01■□□□□ 0.95
GAR1Q9NY12 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GAR1Q9NY12 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
GAR1Q9NY12 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21■□□□□ 0.95
GAR1Q9NY12 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
GAR1Q9NY12 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GAR1Q9NY12 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.99■□□□□ 0.95
GAR1Q9NY12 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GAR1Q9NY12 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.99■□□□□ 0.95
GAR1Q9NY12 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
GAR1Q9NY12 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GAR1Q9NY12 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GAR1Q9NY12 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.98■□□□□ 0.95
GAR1Q9NY12 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GAR1Q9NY12 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.97■□□□□ 0.95
GAR1Q9NY12 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.97■□□□□ 0.95
GAR1Q9NY12 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
GAR1Q9NY12 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GAR1Q9NY12 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
GAR1Q9NY12 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GAR1Q9NY12 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.94■□□□□ 0.94
GAR1Q9NY12 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
GAR1Q9NY12 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GAR1Q9NY12 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
GAR1Q9NY12 RPS2P35-201ENST00000443417 897 ntBASIC20.93■□□□□ 0.94
GAR1Q9NY12 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GAR1Q9NY12 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms