Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
FBXO39Q8N4B4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
FBXO39Q8N4B4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.53■■□□□ 1.84
FBXO39Q8N4B4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
FBXO39Q8N4B4 ABCB10P1-201ENST00000614297 2181 ntBASIC26.5■■□□□ 1.83
FBXO39Q8N4B4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
FBXO39Q8N4B4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
FBXO39Q8N4B4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.49■■□□□ 1.83
FBXO39Q8N4B4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
FBXO39Q8N4B4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
FBXO39Q8N4B4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.47■■□□□ 1.83
FBXO39Q8N4B4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.47■■□□□ 1.83
FBXO39Q8N4B4 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.46■■□□□ 1.83
FBXO39Q8N4B4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
FBXO39Q8N4B4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.45■■□□□ 1.83
FBXO39Q8N4B4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.44■■□□□ 1.82
FBXO39Q8N4B4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.44■■□□□ 1.82
FBXO39Q8N4B4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
FBXO39Q8N4B4 AC087741.3-201ENST00000624270 1347 ntBASIC26.43■■□□□ 1.82
FBXO39Q8N4B4 MIR762-201ENST00000390236 83 ntBASIC26.43■■□□□ 1.82
FBXO39Q8N4B4 ABHD17AP4-201ENST00000411545 909 ntBASIC26.43■■□□□ 1.82
FBXO39Q8N4B4 DUX4L28-201ENST00000623687 678 ntBASIC26.43■■□□□ 1.82
FBXO39Q8N4B4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
FBXO39Q8N4B4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.42■■□□□ 1.82
FBXO39Q8N4B4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
FBXO39Q8N4B4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
FBXO39Q8N4B4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
FBXO39Q8N4B4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
FBXO39Q8N4B4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
FBXO39Q8N4B4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
FBXO39Q8N4B4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
FBXO39Q8N4B4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
FBXO39Q8N4B4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
FBXO39Q8N4B4 AL161658.1-201ENST00000623641 1967 ntBASIC26.39■■□□□ 1.82
FBXO39Q8N4B4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
FBXO39Q8N4B4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
FBXO39Q8N4B4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
FBXO39Q8N4B4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
FBXO39Q8N4B4 AC005559.1-201ENST00000589661 871 ntBASIC26.38■■□□□ 1.81
FBXO39Q8N4B4 MIR7108-201ENST00000614319 87 ntBASIC26.38■■□□□ 1.81
FBXO39Q8N4B4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
FBXO39Q8N4B4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.37■■□□□ 1.81
FBXO39Q8N4B4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.37■■□□□ 1.81
FBXO39Q8N4B4 AC044849.2-201ENST00000606596 710 ntBASIC26.37■■□□□ 1.81
FBXO39Q8N4B4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
FBXO39Q8N4B4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
FBXO39Q8N4B4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
FBXO39Q8N4B4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.35■■□□□ 1.81
FBXO39Q8N4B4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
FBXO39Q8N4B4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
FBXO39Q8N4B4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
FBXO39Q8N4B4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
FBXO39Q8N4B4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.33■■□□□ 1.81
FBXO39Q8N4B4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
FBXO39Q8N4B4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
FBXO39Q8N4B4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.32■■□□□ 1.8
FBXO39Q8N4B4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.32■■□□□ 1.8
FBXO39Q8N4B4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
FBXO39Q8N4B4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
FBXO39Q8N4B4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
FBXO39Q8N4B4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
FBXO39Q8N4B4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
FBXO39Q8N4B4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
FBXO39Q8N4B4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
FBXO39Q8N4B4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
FBXO39Q8N4B4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
FBXO39Q8N4B4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
FBXO39Q8N4B4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.27■■□□□ 1.8
FBXO39Q8N4B4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
FBXO39Q8N4B4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
FBXO39Q8N4B4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
FBXO39Q8N4B4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
FBXO39Q8N4B4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.25■■□□□ 1.79
FBXO39Q8N4B4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
FBXO39Q8N4B4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
FBXO39Q8N4B4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.24■■□□□ 1.79
FBXO39Q8N4B4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
FBXO39Q8N4B4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
FBXO39Q8N4B4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
FBXO39Q8N4B4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
FBXO39Q8N4B4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
FBXO39Q8N4B4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
FBXO39Q8N4B4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
FBXO39Q8N4B4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
FBXO39Q8N4B4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
FBXO39Q8N4B4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.22■■□□□ 1.79
FBXO39Q8N4B4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
FBXO39Q8N4B4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.22■■□□□ 1.79
FBXO39Q8N4B4 ABCB10P3-201ENST00000561950 2166 ntBASIC26.21■■□□□ 1.79
FBXO39Q8N4B4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
FBXO39Q8N4B4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
FBXO39Q8N4B4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
FBXO39Q8N4B4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
FBXO39Q8N4B4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
FBXO39Q8N4B4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
FBXO39Q8N4B4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
FBXO39Q8N4B4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
FBXO39Q8N4B4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.18■■□□□ 1.78
FBXO39Q8N4B4 ST7-AS1-201ENST00000456775 1889 ntBASIC26.18■■□□□ 1.78
FBXO39Q8N4B4 WASH5P-204ENST00000632292 975 ntBASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms