Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
PPP4R3CPQ6ZMV5 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.82■■■□□ 2.36
PPP4R3CPQ6ZMV5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PPP4R3CPQ6ZMV5 RN7SL602P-201ENST00000578326 324 ntBASIC29.82■■■□□ 2.36
PPP4R3CPQ6ZMV5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PPP4R3CPQ6ZMV5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
PPP4R3CPQ6ZMV5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.79■■■□□ 2.36
PPP4R3CPQ6ZMV5 AP006261.1-201ENST00000584783 668 ntBASIC29.79■■■□□ 2.36
PPP4R3CPQ6ZMV5 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PPP4R3CPQ6ZMV5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PPP4R3CPQ6ZMV5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PPP4R3CPQ6ZMV5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PPP4R3CPQ6ZMV5 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC29.77■■■□□ 2.36
PPP4R3CPQ6ZMV5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.75■■■□□ 2.35
PPP4R3CPQ6ZMV5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.75■■■□□ 2.35
PPP4R3CPQ6ZMV5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PPP4R3CPQ6ZMV5 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
PPP4R3CPQ6ZMV5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
PPP4R3CPQ6ZMV5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PPP4R3CPQ6ZMV5 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC29.73■■■□□ 2.35
PPP4R3CPQ6ZMV5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.73■■■□□ 2.35
PPP4R3CPQ6ZMV5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.72■■■□□ 2.35
PPP4R3CPQ6ZMV5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
PPP4R3CPQ6ZMV5 AL162393.1-201ENST00000437852 946 ntBASIC29.72■■■□□ 2.35
PPP4R3CPQ6ZMV5 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC29.72■■■□□ 2.35
PPP4R3CPQ6ZMV5 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.72■■■□□ 2.35
PPP4R3CPQ6ZMV5 MIR762-201ENST00000390236 83 ntBASIC29.71■■■□□ 2.35
PPP4R3CPQ6ZMV5 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.71■■■□□ 2.35
PPP4R3CPQ6ZMV5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
PPP4R3CPQ6ZMV5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.71■■■□□ 2.35
PPP4R3CPQ6ZMV5 RPS2P35-201ENST00000443417 897 ntBASIC29.7■■■□□ 2.35
PPP4R3CPQ6ZMV5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.7■■■□□ 2.35
PPP4R3CPQ6ZMV5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
PPP4R3CPQ6ZMV5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.69■■■□□ 2.34
PPP4R3CPQ6ZMV5 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
PPP4R3CPQ6ZMV5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.69■■■□□ 2.34
PPP4R3CPQ6ZMV5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PPP4R3CPQ6ZMV5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PPP4R3CPQ6ZMV5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.67■■■□□ 2.34
PPP4R3CPQ6ZMV5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
PPP4R3CPQ6ZMV5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PPP4R3CPQ6ZMV5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.65■■■□□ 2.34
PPP4R3CPQ6ZMV5 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC29.65■■■□□ 2.34
PPP4R3CPQ6ZMV5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
PPP4R3CPQ6ZMV5 MIR3665-201ENST00000578708 105 ntBASIC29.63■■■□□ 2.33
PPP4R3CPQ6ZMV5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.63■■■□□ 2.33
PPP4R3CPQ6ZMV5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
PPP4R3CPQ6ZMV5 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC29.6■■■□□ 2.33
PPP4R3CPQ6ZMV5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.59■■■□□ 2.33
PPP4R3CPQ6ZMV5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PPP4R3CPQ6ZMV5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
PPP4R3CPQ6ZMV5 AC017007.3-201ENST00000479865 435 ntBASIC29.59■■■□□ 2.33
PPP4R3CPQ6ZMV5 DUX4L28-201ENST00000623687 678 ntBASIC29.59■■■□□ 2.33
PPP4R3CPQ6ZMV5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
PPP4R3CPQ6ZMV5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
PPP4R3CPQ6ZMV5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.58■■■□□ 2.33
PPP4R3CPQ6ZMV5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PPP4R3CPQ6ZMV5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PPP4R3CPQ6ZMV5 AC005559.1-201ENST00000589661 871 ntBASIC29.58■■■□□ 2.33
PPP4R3CPQ6ZMV5 AL161658.1-201ENST00000623641 1967 ntBASIC29.57■■■□□ 2.32
PPP4R3CPQ6ZMV5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.57■■■□□ 2.32
PPP4R3CPQ6ZMV5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
PPP4R3CPQ6ZMV5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PPP4R3CPQ6ZMV5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
PPP4R3CPQ6ZMV5 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC29.54■■■□□ 2.32
PPP4R3CPQ6ZMV5 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
PPP4R3CPQ6ZMV5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PPP4R3CPQ6ZMV5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
PPP4R3CPQ6ZMV5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.32
PPP4R3CPQ6ZMV5 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
PPP4R3CPQ6ZMV5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PPP4R3CPQ6ZMV5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
PPP4R3CPQ6ZMV5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC29.5■■■□□ 2.31
PPP4R3CPQ6ZMV5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
PPP4R3CPQ6ZMV5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
PPP4R3CPQ6ZMV5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PPP4R3CPQ6ZMV5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PPP4R3CPQ6ZMV5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PPP4R3CPQ6ZMV5 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
PPP4R3CPQ6ZMV5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
PPP4R3CPQ6ZMV5 AC087741.3-201ENST00000624270 1347 ntBASIC29.48■■■□□ 2.31
PPP4R3CPQ6ZMV5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
PPP4R3CPQ6ZMV5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PPP4R3CPQ6ZMV5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PPP4R3CPQ6ZMV5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PPP4R3CPQ6ZMV5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
PPP4R3CPQ6ZMV5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
PPP4R3CPQ6ZMV5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.46■■■□□ 2.31
PPP4R3CPQ6ZMV5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PPP4R3CPQ6ZMV5 MTATP6P19-201ENST00000413797 659 ntBASIC29.44■■■□□ 2.3
PPP4R3CPQ6ZMV5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PPP4R3CPQ6ZMV5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PPP4R3CPQ6ZMV5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.43■■■□□ 2.3
PPP4R3CPQ6ZMV5 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC29.43■■■□□ 2.3
PPP4R3CPQ6ZMV5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PPP4R3CPQ6ZMV5 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
PPP4R3CPQ6ZMV5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.42■■■□□ 2.3
PPP4R3CPQ6ZMV5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PPP4R3CPQ6ZMV5 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PPP4R3CPQ6ZMV5 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms