RNA–Protein interactions for RNA: ENST00000376086.7

LST1-204, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-204ENST00000376086 AEBP2Q6ZN18 517 aaPredicted RBP43.14■■■■■ 4.5
LST1-204ENST00000376086 CHIC1Q5VXU3 224 aa41.83■■■■■ 4.29
LST1-204ENST00000376086 PHF23Q9BUL5 403 aaPredicted RBP36.81■■■■□ 3.48
LST1-204ENST00000376086 SENP3Q9H4L4 574 aaPredicted RBP36.56■■■■□ 3.44
LST1-204ENST00000376086 FOXD1Q16676 465 aa34.02■■■■□ 3.04
LST1-204ENST00000376086 PLPPR3Q6T4P5 718 aa33.82■■■■□ 3
LST1-204ENST00000376086 NISCHQ9Y2I1 1504 aa32.99■■■□□ 2.87
LST1-204ENST00000376086 PPP6R1Q9UPN7 881 aa32.56■■■□□ 2.8
LST1-204ENST00000376086 ADRA2BP18089 450 aa32.47■■■□□ 2.79
LST1-204ENST00000376086 PIAS4Q8N2W9 510 aaPredicted RBP31.95■■■□□ 2.71
LST1-204ENST00000376086 MSH5O43196 834 aa31.41■■■□□ 2.62
LST1-204ENST00000376086 PPP4R3CPQ6ZMV5 832 aa29.78■■■□□ 2.36
LST1-204ENST00000376086 SCAF1Q9H7N4 1312 aaKnown RBP29.63■■■□□ 2.33
LST1-204ENST00000376086 MAPK8IP2Q13387 824 aaPredicted RBP29.56■■■□□ 2.32
LST1-204ENST00000376086 CCDC180Q9P1Z9 1646 aa29.49■■■□□ 2.31
LST1-204ENST00000376086 ABCC9O60706 1549 aa29.4■■■□□ 2.3
LST1-204ENST00000376086 DMRT2Q9Y5R5 561 aa29.18■■■□□ 2.26
LST1-204ENST00000376086 POTEDQ86YR6 584 aa29.11■■■□□ 2.25
LST1-204ENST00000376086 CNKSR2Q8WXI2 1034 aa29■■■□□ 2.23
LST1-204ENST00000376086 NCBP3Q53F19 620 aaKnown RBP28.86■■■□□ 2.21
LST1-204ENST00000376086 KCNA4P22459 653 aa28.81■■■□□ 2.2
LST1-204ENST00000376086 NPM3O75607 178 aaKnown RBP28.52■■■□□ 2.16
LST1-204ENST00000376086 RNF216Q9NWF9 866 aaPredicted RBP28.5■■■□□ 2.15
LST1-204ENST00000376086 HOXD11P31277 338 aaPredicted RBP28.49■■■□□ 2.15
LST1-204ENST00000376086 RB1CC1Q8TDY2 1594 aa27.99■■■□□ 2.07
LST1-204ENST00000376086 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
LST1-204ENST00000376086 DCAF8L1A6NGE4 600 aa27.83■■■□□ 2.05
LST1-204ENST00000376086 NACADO15069 1562 aa27.8■■■□□ 2.04
LST1-204ENST00000376086 DNAJC5BQ9UF47 199 aa27.78■■■□□ 2.04
LST1-204ENST00000376086 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
LST1-204ENST00000376086 PABPN1Q86U42 306 aaKnown RBP eCLIP27.41■■□□□ 1.98
LST1-204ENST00000376086 ZCCHC6Q5VYS8 1495 aaKnown RBP27.39■■□□□ 1.98
LST1-204ENST00000376086 MYO15BQ96JP2 1530 aa27.39■■□□□ 1.98
LST1-204ENST00000376086 SLC4A1APQ9BWU0 796 aaKnown RBP27.34■■□□□ 1.97
LST1-204ENST00000376086 BICRAQ9NZM4 1560 aa27.18■■□□□ 1.94
LST1-204ENST00000376086 DCAF1Q9Y4B6 1507 aa27.16■■□□□ 1.94
LST1-204ENST00000376086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.06■■□□□ 1.92
LST1-204ENST00000376086 SCRIBQ14160 1630 aa27.04■■□□□ 1.92
LST1-204ENST00000376086 SLC4A2P04920 1241 aa27.03■■□□□ 1.92
LST1-204ENST00000376086 RNF39Q9H2S5 420 aa26.94■■□□□ 1.9
LST1-204ENST00000376086 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
LST1-204ENST00000376086 U3KPZ7 1027 aaPredicted RBP26.67■■□□□ 1.86
LST1-204ENST00000376086 C1QBPQ07021 282 aaKnown RBP26.57■■□□□ 1.84
LST1-204ENST00000376086 FOXD4L1Q9NU39 408 aa26.57■■□□□ 1.84
LST1-204ENST00000376086 ZBTB22O15209 634 aa26.55■■□□□ 1.84
LST1-204ENST00000376086 CC2D2AQ9P2K1 1620 aa26.53■■□□□ 1.84
LST1-204ENST00000376086 EIF4G1Q04637 1599 aaKnown RBP26.5■■□□□ 1.83
LST1-204ENST00000376086 CECR2Q9BXF3 1484 aa26.38■■□□□ 1.81
LST1-204ENST00000376086 CACNB1Q02641 598 aaPredicted RBP26.36■■□□□ 1.81
LST1-204ENST00000376086 MYCNP04198 464 aaPredicted RBP26.32■■□□□ 1.8
LST1-204ENST00000376086 EHMT2Q96KQ7 1210 aa26.24■■□□□ 1.79
LST1-204ENST00000376086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.16■■□□□ 1.78
LST1-204ENST00000376086 HNRNPUL2Q1KMD3 747 aaKnown RBP26.16■■□□□ 1.78
LST1-204ENST00000376086 CSRNP3Q8WYN3 585 aa26.16■■□□□ 1.78
LST1-204ENST00000376086 SAMD1Q6SPF0 538 aaPredicted RBP26.07■■□□□ 1.76
LST1-204ENST00000376086 SPINK5Q9NQ38 1064 aaPredicted RBP26■■□□□ 1.75
LST1-204ENST00000376086 APLP2Q06481 763 aa25.92■■□□□ 1.74
LST1-204ENST00000376086 CAPN15O75808 1086 aa25.84■■□□□ 1.73
LST1-204ENST00000376086 SMARCA4P51532 1647 aa25.73■■□□□ 1.71
LST1-204ENST00000376086 ATF5Q9Y2D1 282 aaPredicted RBP25.71■■□□□ 1.71
LST1-204ENST00000376086 ATXN8OSP0DMR3 200 aa25.66■■□□□ 1.7
LST1-204ENST00000376086 TRHP20396 242 aaPredicted RBP25.66■■□□□ 1.7
LST1-204ENST00000376086 ZNF219Q9P2Y4 722 aaPredicted RBP25.66■■□□□ 1.7
LST1-204ENST00000376086 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
LST1-204ENST00000376086 NCAPD3P42695 1498 aa25.64■■□□□ 1.69
LST1-204ENST00000376086 BAZ1AQ9NRL2 1556 aaPredicted RBP25.6■■□□□ 1.69
LST1-204ENST00000376086 SMARCA2P51531 1590 aa25.58■■□□□ 1.69
LST1-204ENST00000376086 DSG3P32926 999 aa25.55■■□□□ 1.68
LST1-204ENST00000376086 HMGXB3Q12766 1538 aa25.5■■□□□ 1.67
LST1-204ENST00000376086 MROH2BQ7Z745 1585 aa25.48■■□□□ 1.67
LST1-204ENST00000376086 BAZ1BQ9UIG0 1483 aaKnown RBP25.46■■□□□ 1.67
LST1-204ENST00000376086 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
LST1-204ENST00000376086 ABCB7O75027 752 aa25.35■■□□□ 1.65
LST1-204ENST00000376086 ERCC6Q03468 1493 aa25.34■■□□□ 1.65
LST1-204ENST00000376086 NESP48681 1621 aa25.32■■□□□ 1.64
LST1-204ENST00000376086 WIZO95785 1651 aa25.24■■□□□ 1.63
LST1-204ENST00000376086 POLA2Q14181 598 aa25.22■■□□□ 1.63
LST1-204ENST00000376086 CUX2O14529 1486 aa25.1■■□□□ 1.61
LST1-204ENST00000376086 LAMC3Q9Y6N6 1575 aa25.08■■□□□ 1.61
LST1-204ENST00000376086 KIF21AQ7Z4S6 1674 aa25.02■■□□□ 1.6
LST1-204ENST00000376086 RSF1Q96T23 1441 aaPredicted RBP25■■□□□ 1.59
LST1-204ENST00000376086 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
LST1-204ENST00000376086 PDS5BQ9NTI5 1447 aa24.91■■□□□ 1.58
LST1-204ENST00000376086 CADPSQ9ULU8 1353 aa24.91■■□□□ 1.58
LST1-204ENST00000376086 TOP2AP11388 1531 aaKnown RBP24.86■■□□□ 1.57
LST1-204ENST00000376086 DNAJC5Q9H3Z4 198 aa24.83■■□□□ 1.57
LST1-204ENST00000376086 ZBTB12Q9Y330 459 aaPredicted RBP24.73■■□□□ 1.55
LST1-204ENST00000376086 MRC2Q9UBG0 1479 aa24.72■■□□□ 1.55
LST1-204ENST00000376086 FANCD2Q9BXW9 1451 aa24.69■■□□□ 1.54
LST1-204ENST00000376086 CEP164Q9UPV0 1460 aa24.69■■□□□ 1.54
LST1-204ENST00000376086 CFTRP13569 1480 aa24.66■■□□□ 1.54
LST1-204ENST00000376086 WDR62O43379 1518 aa24.63■■□□□ 1.53
LST1-204ENST00000376086 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.53
LST1-204ENST00000376086 MKRN4PQ13434 485 aaPredicted RBP24.57■■□□□ 1.52
LST1-204ENST00000376086 PRDM2Q13029 1718 aa24.54■■□□□ 1.52
LST1-204ENST00000376086 FBLN2P98095 1184 aa24.52■■□□□ 1.52
LST1-204ENST00000376086 URB2Q14146 1524 aaKnown RBP24.47■■□□□ 1.51
LST1-204ENST00000376086 OSCARQ8IYS5 282 aa24.38■■□□□ 1.49
LST1-204ENST00000376086 RBM42Q9BTD8 480 aaKnown RBP24.27■■□□□ 1.48
LST1-204ENST00000376086 TOPBP1Q92547 1522 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms