Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
CCDC144BQ3MJ40 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.96■■■□□ 2.55
CCDC144BQ3MJ40 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
CCDC144BQ3MJ40 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.93■■■□□ 2.54
CCDC144BQ3MJ40 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC144BQ3MJ40 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.92■■■□□ 2.54
CCDC144BQ3MJ40 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
CCDC144BQ3MJ40 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC144BQ3MJ40 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.91■■■□□ 2.54
CCDC144BQ3MJ40 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC144BQ3MJ40 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC144BQ3MJ40 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.89■■■□□ 2.53
CCDC144BQ3MJ40 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC144BQ3MJ40 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC144BQ3MJ40 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.87■■■□□ 2.53
CCDC144BQ3MJ40 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.86■■■□□ 2.53
CCDC144BQ3MJ40 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC144BQ3MJ40 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC144BQ3MJ40 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC144BQ3MJ40 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.85■■■□□ 2.53
CCDC144BQ3MJ40 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC144BQ3MJ40 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC144BQ3MJ40 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC144BQ3MJ40 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.83■■■□□ 2.53
CCDC144BQ3MJ40 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.83■■■□□ 2.53
CCDC144BQ3MJ40 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.83■■■□□ 2.53
CCDC144BQ3MJ40 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC144BQ3MJ40 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC144BQ3MJ40 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.82■■■□□ 2.52
CCDC144BQ3MJ40 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC144BQ3MJ40 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC144BQ3MJ40 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC144BQ3MJ40 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC144BQ3MJ40 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.8■■■□□ 2.52
CCDC144BQ3MJ40 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
CCDC144BQ3MJ40 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CCDC144BQ3MJ40 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC144BQ3MJ40 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC144BQ3MJ40 ZNRF2P2-203ENST00000454624 420 ntBASIC30.77■■■□□ 2.52
CCDC144BQ3MJ40 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.77■■■□□ 2.52
CCDC144BQ3MJ40 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC144BQ3MJ40 ABCB10P1-201ENST00000614297 2181 ntBASIC30.76■■■□□ 2.52
CCDC144BQ3MJ40 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.76■■■□□ 2.51
CCDC144BQ3MJ40 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC144BQ3MJ40 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC144BQ3MJ40 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC144BQ3MJ40 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC144BQ3MJ40 HLA-V-202ENST00000446817 847 ntBASIC30.74■■■□□ 2.51
CCDC144BQ3MJ40 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.74■■■□□ 2.51
CCDC144BQ3MJ40 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.73■■■□□ 2.51
CCDC144BQ3MJ40 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC144BQ3MJ40 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC144BQ3MJ40 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC144BQ3MJ40 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC144BQ3MJ40 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC144BQ3MJ40 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.72■■■□□ 2.51
CCDC144BQ3MJ40 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC144BQ3MJ40 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.71■■■□□ 2.51
CCDC144BQ3MJ40 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC144BQ3MJ40 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.71■■■□□ 2.51
CCDC144BQ3MJ40 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC144BQ3MJ40 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.71■■■□□ 2.51
CCDC144BQ3MJ40 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC144BQ3MJ40 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC144BQ3MJ40 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.69■■■□□ 2.5
CCDC144BQ3MJ40 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC144BQ3MJ40 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.68■■■□□ 2.5
CCDC144BQ3MJ40 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC144BQ3MJ40 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC144BQ3MJ40 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC144BQ3MJ40 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC144BQ3MJ40 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.64■■■□□ 2.5
CCDC144BQ3MJ40 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC144BQ3MJ40 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC144BQ3MJ40 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC144BQ3MJ40 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.63■■■□□ 2.49
CCDC144BQ3MJ40 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC144BQ3MJ40 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC144BQ3MJ40 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.62■■■□□ 2.49
CCDC144BQ3MJ40 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.61■■■□□ 2.49
CCDC144BQ3MJ40 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.61■■■□□ 2.49
CCDC144BQ3MJ40 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.61■■■□□ 2.49
CCDC144BQ3MJ40 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC144BQ3MJ40 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC144BQ3MJ40 DUX4L29-201ENST00000425409 679 ntBASIC30.59■■■□□ 2.49
CCDC144BQ3MJ40 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC144BQ3MJ40 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.58■■■□□ 2.49
CCDC144BQ3MJ40 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC144BQ3MJ40 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CCDC144BQ3MJ40 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CCDC144BQ3MJ40 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CCDC144BQ3MJ40 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.56■■■□□ 2.48
CCDC144BQ3MJ40 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.56■■■□□ 2.48
CCDC144BQ3MJ40 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.55■■■□□ 2.48
CCDC144BQ3MJ40 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC144BQ3MJ40 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC144BQ3MJ40 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CCDC144BQ3MJ40 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.52■■■□□ 2.48
CCDC144BQ3MJ40 ABCB10P3-201ENST00000561950 2166 ntBASIC30.52■■■□□ 2.48
CCDC144BQ3MJ40 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms