Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF253O75346 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.46■□□□□ 0.87
ZNF253O75346 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF253O75346 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF253O75346 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF253O75346 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF253O75346 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF253O75346 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ZNF253O75346 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF253O75346 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF253O75346 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF253O75346 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF253O75346 AL031258.1-201ENST00000623562 325 ntBASIC20.43■□□□□ 0.86
ZNF253O75346 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ZNF253O75346 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF253O75346 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.41■□□□□ 0.86
ZNF253O75346 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF253O75346 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF253O75346 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ZNF253O75346 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ZNF253O75346 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF253O75346 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF253O75346 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF253O75346 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF253O75346 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF253O75346 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.38■□□□□ 0.85
ZNF253O75346 AC135731.1-201ENST00000569415 2548 ntBASIC20.37■□□□□ 0.85
ZNF253O75346 ST7-AS1-201ENST00000456775 1889 ntBASIC20.37■□□□□ 0.85
ZNF253O75346 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ZNF253O75346 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF253O75346 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
ZNF253O75346 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ZNF253O75346 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF253O75346 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
ZNF253O75346 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF253O75346 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.36■□□□□ 0.85
ZNF253O75346 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.35■□□□□ 0.85
ZNF253O75346 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF253O75346 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF253O75346 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF253O75346 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF253O75346 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
ZNF253O75346 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.34■□□□□ 0.85
ZNF253O75346 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF253O75346 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF253O75346 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF253O75346 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF253O75346 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF253O75346 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF253O75346 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ZNF253O75346 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF253O75346 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF253O75346 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
ZNF253O75346 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF253O75346 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF253O75346 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF253O75346 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF253O75346 AP002365.1-201ENST00000603448 772 ntBASIC20.31■□□□□ 0.84
ZNF253O75346 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
ZNF253O75346 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ZNF253O75346 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF253O75346 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF253O75346 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF253O75346 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF253O75346 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF253O75346 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF253O75346 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF253O75346 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF253O75346 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF253O75346 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF253O75346 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF253O75346 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF253O75346 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF253O75346 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF253O75346 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF253O75346 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ZNF253O75346 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF253O75346 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNF253O75346 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
ZNF253O75346 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF253O75346 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
ZNF253O75346 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF253O75346 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF253O75346 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF253O75346 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF253O75346 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF253O75346 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZNF253O75346 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF253O75346 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF253O75346 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF253O75346 AL135925.1-201ENST00000605920 1701 ntBASIC20.23■□□□□ 0.83
ZNF253O75346 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF253O75346 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ZNF253O75346 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF253O75346 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF253O75346 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF253O75346 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF253O75346 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF253O75346 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ZNF253O75346 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms