Protein–RNA interactions for Protein: A6NNJ1

FAM90A9P, Putative protein FAM90A9P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A9PA6NNJ1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FAM90A9PA6NNJ1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.8■■□□□ 1.08
FAM90A9PA6NNJ1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FAM90A9PA6NNJ1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FAM90A9PA6NNJ1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FAM90A9PA6NNJ1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
FAM90A9PA6NNJ1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.77■■□□□ 1.08
FAM90A9PA6NNJ1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FAM90A9PA6NNJ1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FAM90A9PA6NNJ1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FAM90A9PA6NNJ1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FAM90A9PA6NNJ1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FAM90A9PA6NNJ1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FAM90A9PA6NNJ1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
FAM90A9PA6NNJ1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FAM90A9PA6NNJ1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
FAM90A9PA6NNJ1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.75■■□□□ 1.07
FAM90A9PA6NNJ1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM90A9PA6NNJ1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM90A9PA6NNJ1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.74■■□□□ 1.07
FAM90A9PA6NNJ1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.74■■□□□ 1.07
FAM90A9PA6NNJ1 SUZ12P1-203ENST00000578195 985 ntBASIC21.74■■□□□ 1.07
FAM90A9PA6NNJ1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FAM90A9PA6NNJ1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM90A9PA6NNJ1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FAM90A9PA6NNJ1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM90A9PA6NNJ1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FAM90A9PA6NNJ1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM90A9PA6NNJ1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
FAM90A9PA6NNJ1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.72■■□□□ 1.07
FAM90A9PA6NNJ1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.7■■□□□ 1.06
FAM90A9PA6NNJ1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.7■■□□□ 1.06
FAM90A9PA6NNJ1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
FAM90A9PA6NNJ1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM90A9PA6NNJ1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM90A9PA6NNJ1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FAM90A9PA6NNJ1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
FAM90A9PA6NNJ1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
FAM90A9PA6NNJ1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FAM90A9PA6NNJ1 ST7-AS1-201ENST00000456775 1889 ntBASIC21.68■■□□□ 1.06
FAM90A9PA6NNJ1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.67■■□□□ 1.06
FAM90A9PA6NNJ1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FAM90A9PA6NNJ1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
FAM90A9PA6NNJ1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM90A9PA6NNJ1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
FAM90A9PA6NNJ1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FAM90A9PA6NNJ1 AL161658.1-201ENST00000623641 1967 ntBASIC21.64■■□□□ 1.05
FAM90A9PA6NNJ1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
FAM90A9PA6NNJ1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM90A9PA6NNJ1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FAM90A9PA6NNJ1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FAM90A9PA6NNJ1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FAM90A9PA6NNJ1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
FAM90A9PA6NNJ1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
FAM90A9PA6NNJ1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FAM90A9PA6NNJ1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FAM90A9PA6NNJ1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.6■■□□□ 1.05
FAM90A9PA6NNJ1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
FAM90A9PA6NNJ1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
FAM90A9PA6NNJ1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FAM90A9PA6NNJ1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FAM90A9PA6NNJ1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FAM90A9PA6NNJ1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FAM90A9PA6NNJ1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.58■■□□□ 1.05
FAM90A9PA6NNJ1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.58■■□□□ 1.05
FAM90A9PA6NNJ1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
FAM90A9PA6NNJ1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FAM90A9PA6NNJ1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FAM90A9PA6NNJ1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
FAM90A9PA6NNJ1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FAM90A9PA6NNJ1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
FAM90A9PA6NNJ1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FAM90A9PA6NNJ1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FAM90A9PA6NNJ1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.55■■□□□ 1.04
FAM90A9PA6NNJ1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FAM90A9PA6NNJ1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FAM90A9PA6NNJ1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FAM90A9PA6NNJ1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FAM90A9PA6NNJ1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FAM90A9PA6NNJ1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FAM90A9PA6NNJ1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
FAM90A9PA6NNJ1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FAM90A9PA6NNJ1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.52■■□□□ 1.04
FAM90A9PA6NNJ1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FAM90A9PA6NNJ1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.51■■□□□ 1.03
FAM90A9PA6NNJ1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
FAM90A9PA6NNJ1 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.51■■□□□ 1.03
FAM90A9PA6NNJ1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FAM90A9PA6NNJ1 AL135925.1-201ENST00000605920 1701 ntBASIC21.51■■□□□ 1.03
FAM90A9PA6NNJ1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FAM90A9PA6NNJ1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
FAM90A9PA6NNJ1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
FAM90A9PA6NNJ1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
FAM90A9PA6NNJ1 MIR762-201ENST00000390236 83 ntBASIC21.49■■□□□ 1.03
FAM90A9PA6NNJ1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
FAM90A9PA6NNJ1 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.49■■□□□ 1.03
FAM90A9PA6NNJ1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
FAM90A9PA6NNJ1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.48■■□□□ 1.03
FAM90A9PA6NNJ1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FAM90A9PA6NNJ1 AC139426.1-201ENST00000568218 2529 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms