Protein–RNA interactions for Protein: A0A1B0GTE1

LOC100289279, Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC100289279A0A1B0GTE1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
LOC100289279A0A1B0GTE1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
LOC100289279A0A1B0GTE1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
LOC100289279A0A1B0GTE1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
LOC100289279A0A1B0GTE1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
LOC100289279A0A1B0GTE1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
LOC100289279A0A1B0GTE1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LOC100289279A0A1B0GTE1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LOC100289279A0A1B0GTE1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LOC100289279A0A1B0GTE1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LOC100289279A0A1B0GTE1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LOC100289279A0A1B0GTE1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
LOC100289279A0A1B0GTE1 AC139426.1-201ENST00000568218 2529 ntBASIC23.34■■□□□ 1.33
LOC100289279A0A1B0GTE1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LOC100289279A0A1B0GTE1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LOC100289279A0A1B0GTE1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
LOC100289279A0A1B0GTE1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
LOC100289279A0A1B0GTE1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
LOC100289279A0A1B0GTE1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LOC100289279A0A1B0GTE1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LOC100289279A0A1B0GTE1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.31■■□□□ 1.32
LOC100289279A0A1B0GTE1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LOC100289279A0A1B0GTE1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.3■■□□□ 1.32
LOC100289279A0A1B0GTE1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LOC100289279A0A1B0GTE1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LOC100289279A0A1B0GTE1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
LOC100289279A0A1B0GTE1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LOC100289279A0A1B0GTE1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LOC100289279A0A1B0GTE1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LOC100289279A0A1B0GTE1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LOC100289279A0A1B0GTE1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LOC100289279A0A1B0GTE1 CAHM-201ENST00000604200 896 ntBASIC23.27■■□□□ 1.32
LOC100289279A0A1B0GTE1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
LOC100289279A0A1B0GTE1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
LOC100289279A0A1B0GTE1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
LOC100289279A0A1B0GTE1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LOC100289279A0A1B0GTE1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LOC100289279A0A1B0GTE1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LOC100289279A0A1B0GTE1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
LOC100289279A0A1B0GTE1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
LOC100289279A0A1B0GTE1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LOC100289279A0A1B0GTE1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
LOC100289279A0A1B0GTE1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LOC100289279A0A1B0GTE1 ST7-AS1-201ENST00000456775 1889 ntBASIC23.22■■□□□ 1.31
LOC100289279A0A1B0GTE1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.21■■□□□ 1.31
LOC100289279A0A1B0GTE1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LOC100289279A0A1B0GTE1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.21■■□□□ 1.31
LOC100289279A0A1B0GTE1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LOC100289279A0A1B0GTE1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LOC100289279A0A1B0GTE1 AL391121.1-201ENST00000607967 1349 ntBASIC23.2■■□□□ 1.3
LOC100289279A0A1B0GTE1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LOC100289279A0A1B0GTE1 AP006261.1-201ENST00000584783 668 ntBASIC23.19■■□□□ 1.3
LOC100289279A0A1B0GTE1 AL162393.1-201ENST00000437852 946 ntBASIC23.18■■□□□ 1.3
LOC100289279A0A1B0GTE1 AL133380.1-201ENST00000506013 324 ntBASIC23.18■■□□□ 1.3
LOC100289279A0A1B0GTE1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
LOC100289279A0A1B0GTE1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.17■■□□□ 1.3
LOC100289279A0A1B0GTE1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LOC100289279A0A1B0GTE1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
LOC100289279A0A1B0GTE1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LOC100289279A0A1B0GTE1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LOC100289279A0A1B0GTE1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LOC100289279A0A1B0GTE1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LOC100289279A0A1B0GTE1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
LOC100289279A0A1B0GTE1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LOC100289279A0A1B0GTE1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.14■■□□□ 1.29
LOC100289279A0A1B0GTE1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.14■■□□□ 1.29
LOC100289279A0A1B0GTE1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
LOC100289279A0A1B0GTE1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LOC100289279A0A1B0GTE1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LOC100289279A0A1B0GTE1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
LOC100289279A0A1B0GTE1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LOC100289279A0A1B0GTE1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LOC100289279A0A1B0GTE1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
LOC100289279A0A1B0GTE1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
LOC100289279A0A1B0GTE1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LOC100289279A0A1B0GTE1 AL161658.1-201ENST00000623641 1967 ntBASIC23.1■■□□□ 1.29
LOC100289279A0A1B0GTE1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LOC100289279A0A1B0GTE1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
LOC100289279A0A1B0GTE1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.09■■□□□ 1.29
LOC100289279A0A1B0GTE1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
LOC100289279A0A1B0GTE1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LOC100289279A0A1B0GTE1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.08■■□□□ 1.28
LOC100289279A0A1B0GTE1 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.07■■□□□ 1.28
LOC100289279A0A1B0GTE1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
LOC100289279A0A1B0GTE1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LOC100289279A0A1B0GTE1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LOC100289279A0A1B0GTE1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.06■■□□□ 1.28
LOC100289279A0A1B0GTE1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LOC100289279A0A1B0GTE1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
LOC100289279A0A1B0GTE1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LOC100289279A0A1B0GTE1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
LOC100289279A0A1B0GTE1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.05■■□□□ 1.28
LOC100289279A0A1B0GTE1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LOC100289279A0A1B0GTE1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.05■■□□□ 1.28
LOC100289279A0A1B0GTE1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LOC100289279A0A1B0GTE1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LOC100289279A0A1B0GTE1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LOC100289279A0A1B0GTE1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.04■■□□□ 1.28
LOC100289279A0A1B0GTE1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.04■■□□□ 1.28
LOC100289279A0A1B0GTE1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms