Protein–RNA interactions for Protein: A0A075B6L6

TRBV7-3, T-cell receptor beta variable 7-3 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-3A0A075B6L6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV7-3A0A075B6L6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV7-3A0A075B6L6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV7-3A0A075B6L6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV7-3A0A075B6L6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV7-3A0A075B6L6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.97■□□□□ 0.63
TRBV7-3A0A075B6L6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV7-3A0A075B6L6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV7-3A0A075B6L6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRBV7-3A0A075B6L6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV7-3A0A075B6L6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV7-3A0A075B6L6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV7-3A0A075B6L6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV7-3A0A075B6L6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV7-3A0A075B6L6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV7-3A0A075B6L6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRBV7-3A0A075B6L6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV7-3A0A075B6L6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
TRBV7-3A0A075B6L6 AC135731.1-201ENST00000569415 2548 ntBASIC18.94■□□□□ 0.62
TRBV7-3A0A075B6L6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.93■□□□□ 0.62
TRBV7-3A0A075B6L6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRBV7-3A0A075B6L6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV7-3A0A075B6L6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV7-3A0A075B6L6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV7-3A0A075B6L6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
TRBV7-3A0A075B6L6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV7-3A0A075B6L6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV7-3A0A075B6L6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV7-3A0A075B6L6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV7-3A0A075B6L6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRBV7-3A0A075B6L6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV7-3A0A075B6L6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV7-3A0A075B6L6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV7-3A0A075B6L6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV7-3A0A075B6L6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV7-3A0A075B6L6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBV7-3A0A075B6L6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.88■□□□□ 0.61
TRBV7-3A0A075B6L6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV7-3A0A075B6L6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
TRBV7-3A0A075B6L6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV7-3A0A075B6L6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV7-3A0A075B6L6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV7-3A0A075B6L6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV7-3A0A075B6L6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV7-3A0A075B6L6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRBV7-3A0A075B6L6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRBV7-3A0A075B6L6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV7-3A0A075B6L6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRBV7-3A0A075B6L6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV7-3A0A075B6L6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV7-3A0A075B6L6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV7-3A0A075B6L6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV7-3A0A075B6L6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV7-3A0A075B6L6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV7-3A0A075B6L6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV7-3A0A075B6L6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV7-3A0A075B6L6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV7-3A0A075B6L6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV7-3A0A075B6L6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.84■□□□□ 0.61
TRBV7-3A0A075B6L6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV7-3A0A075B6L6 ST7-AS1-201ENST00000456775 1889 ntBASIC18.84■□□□□ 0.61
TRBV7-3A0A075B6L6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV7-3A0A075B6L6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV7-3A0A075B6L6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV7-3A0A075B6L6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TRBV7-3A0A075B6L6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.82■□□□□ 0.6
TRBV7-3A0A075B6L6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV7-3A0A075B6L6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.82■□□□□ 0.6
TRBV7-3A0A075B6L6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.8■□□□□ 0.6
TRBV7-3A0A075B6L6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV7-3A0A075B6L6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV7-3A0A075B6L6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV7-3A0A075B6L6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.79■□□□□ 0.6
TRBV7-3A0A075B6L6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV7-3A0A075B6L6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.79■□□□□ 0.6
TRBV7-3A0A075B6L6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV7-3A0A075B6L6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV7-3A0A075B6L6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV7-3A0A075B6L6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV7-3A0A075B6L6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV7-3A0A075B6L6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV7-3A0A075B6L6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV7-3A0A075B6L6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV7-3A0A075B6L6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV7-3A0A075B6L6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV7-3A0A075B6L6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV7-3A0A075B6L6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRBV7-3A0A075B6L6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV7-3A0A075B6L6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.76■□□□□ 0.59
TRBV7-3A0A075B6L6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV7-3A0A075B6L6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRBV7-3A0A075B6L6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV7-3A0A075B6L6 AL135925.1-201ENST00000605920 1701 ntBASIC18.74■□□□□ 0.59
TRBV7-3A0A075B6L6 WASH5P-204ENST00000632292 975 ntBASIC18.74■□□□□ 0.59
TRBV7-3A0A075B6L6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV7-3A0A075B6L6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV7-3A0A075B6L6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV7-3A0A075B6L6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV7-3A0A075B6L6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV7-3A0A075B6L6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms