Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.71■□□□□ 0.75
COMMD3-BMI1R4GMX3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD3-BMI1R4GMX3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD3-BMI1R4GMX3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD3-BMI1R4GMX3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD3-BMI1R4GMX3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.71■□□□□ 0.75
COMMD3-BMI1R4GMX3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD3-BMI1R4GMX3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
COMMD3-BMI1R4GMX3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.71■□□□□ 0.75
COMMD3-BMI1R4GMX3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.74
COMMD3-BMI1R4GMX3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD3-BMI1R4GMX3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3-BMI1R4GMX3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3-BMI1R4GMX3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3-BMI1R4GMX3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3-BMI1R4GMX3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.69■□□□□ 0.74
COMMD3-BMI1R4GMX3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.69■□□□□ 0.74
COMMD3-BMI1R4GMX3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3-BMI1R4GMX3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3-BMI1R4GMX3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.69■□□□□ 0.74
COMMD3-BMI1R4GMX3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3-BMI1R4GMX3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3-BMI1R4GMX3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3-BMI1R4GMX3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD3-BMI1R4GMX3 LINC01960-201ENST00000563759 1884 ntBASIC19.69■□□□□ 0.74
COMMD3-BMI1R4GMX3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.68■□□□□ 0.74
COMMD3-BMI1R4GMX3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 PCDHAC2-203ENST00000615316 3011 ntBASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD3-BMI1R4GMX3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3-BMI1R4GMX3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms