RNA–Protein interactions for RNA: ENST00000306121.7

SNX7-201, Transcript of sorting nexin 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX7, Length 1,734 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX7-201ENST00000306121 NISCHQ9Y2I1 1504 aa47.34■■■■■ 5.17
SNX7-201ENST00000306121 CCDC180Q9P1Z9 1646 aa41.15■■■■■ 4.18
SNX7-201ENST00000306121 ZCCHC6Q5VYS8 1495 aaKnown RBP39.84■■■■□ 3.97
SNX7-201ENST00000306121 DCAF1Q9Y4B6 1507 aa39.15■■■■□ 3.86
SNX7-201ENST00000306121 DCAF8L2P0C7V8 631 aa38.93■■■■□ 3.82
SNX7-201ENST00000306121 SHROOM4Q9ULL8 1493 aa38.82■■■■□ 3.8
SNX7-201ENST00000306121 ABCC9O60706 1549 aa38.59■■■■□ 3.77
SNX7-201ENST00000306121 MYO15BQ96JP2 1530 aa38.55■■■■□ 3.76
SNX7-201ENST00000306121 NACADO15069 1562 aa38.23■■■■□ 3.71
SNX7-201ENST00000306121 SCRIBQ14160 1630 aa37.88■■■■□ 3.65
SNX7-201ENST00000306121 RB1CC1Q8TDY2 1594 aa37.82■■■■□ 3.65
SNX7-201ENST00000306121 SUPT5HO00267 1087 aaKnown RBP37.49■■■■□ 3.59
SNX7-201ENST00000306121 UNC13AQ9UPW8 1703 aa37.14■■■■□ 3.54
SNX7-201ENST00000306121 RSF1Q96T23 1441 aaPredicted RBP36.84■■■■□ 3.49
SNX7-201ENST00000306121 CECR2Q9BXF3 1484 aa36.76■■■■□ 3.47
SNX7-201ENST00000306121 BICRAQ9NZM4 1560 aa36.71■■■■□ 3.47
SNX7-201ENST00000306121 MROH2BQ7Z745 1585 aa36.59■■■■□ 3.45
SNX7-201ENST00000306121 BAZ1AQ9NRL2 1556 aaPredicted RBP36.52■■■■□ 3.44
SNX7-201ENST00000306121 PABPN1Q86U42 306 aaKnown RBP eCLIP36.45■■■■□ 3.43
SNX7-201ENST00000306121 SMARCA4P51532 1647 aa36.34■■■■□ 3.41
SNX7-201ENST00000306121 WIZO95785 1651 aa36.32■■■■□ 3.41
SNX7-201ENST00000306121 CHIC1Q5VXU3 224 aa36.08■■■■□ 3.37
SNX7-201ENST00000306121 TOP2AP11388 1531 aaKnown RBP35.95■■■■□ 3.35
SNX7-201ENST00000306121 PEG3Q9GZU2 1588 aa35.88■■■■□ 3.33
SNX7-201ENST00000306121 ATAD2BQ9ULI0 1458 aa35.64■■■■□ 3.3
SNX7-201ENST00000306121 SMARCA2P51531 1590 aa35.63■■■■□ 3.29
SNX7-201ENST00000306121 CCDC88BA6NC98 1476 aa35.57■■■■□ 3.29
SNX7-201ENST00000306121 EIF4G1Q04637 1599 aaKnown RBP35.55■■■■□ 3.28
SNX7-201ENST00000306121 BAZ1BQ9UIG0 1483 aaKnown RBP35.45■■■■□ 3.27
SNX7-201ENST00000306121 NCAPD3P42695 1498 aa35.27■■■■□ 3.24
SNX7-201ENST00000306121 HMGXB3Q12766 1538 aa35.27■■■■□ 3.24
SNX7-201ENST00000306121 TRIM41Q8WV44 630 aa35.23■■■■□ 3.23
SNX7-201ENST00000306121 CC2D2AQ9P2K1 1620 aa34.95■■■■□ 3.19
SNX7-201ENST00000306121 ABCC8Q09428 1581 aa34.94■■■■□ 3.18
SNX7-201ENST00000306121 LOC105371045A0A1W2PR82 267 aa34.7■■■■□ 3.15
SNX7-201ENST00000306121 WRNQ14191 1432 aaPredicted RBP eCLIP34.66■■■■□ 3.14
SNX7-201ENST00000306121 FAM9AQ8IZU1 332 aaPredicted RBP34.59■■■■□ 3.13
SNX7-201ENST00000306121 CFTRP13569 1480 aa34.58■■■■□ 3.13
SNX7-201ENST00000306121 SYNJ1O43426 1573 aa34.54■■■■□ 3.12
SNX7-201ENST00000306121 PRDM2Q13029 1718 aa34.49■■■■□ 3.11
SNX7-201ENST00000306121 CADPSQ9ULU8 1353 aa34.38■■■■□ 3.09
SNX7-201ENST00000306121 TOP2BQ02880 1626 aa34.37■■■■□ 3.09
SNX7-201ENST00000306121 BIVM-ERCC5R4GMW8 1640 aa34.34■■■■□ 3.09
SNX7-201ENST00000306121 SOGA1O94964 1423 aa34.34■■■■□ 3.09
SNX7-201ENST00000306121 EEA1Q15075 1411 aa34.33■■■■□ 3.09
SNX7-201ENST00000306121 CUX1P39880 1505 aa34.2■■■■□ 3.07
SNX7-201ENST00000306121 RUSC2Q8N2Y8 1516 aa34.19■■■■□ 3.06
SNX7-201ENST00000306121 CSRNP3Q8WYN3 585 aa34.1■■■■□ 3.05
SNX7-201ENST00000306121 EHMT2Q96KQ7 1210 aa34.09■■■■□ 3.05
SNX7-201ENST00000306121 LAMC3Q9Y6N6 1575 aa34.03■■■■□ 3.04
SNX7-201ENST00000306121 FANCD2Q9BXW9 1451 aa34.02■■■■□ 3.04
SNX7-201ENST00000306121 NESP48681 1621 aa34■■■■□ 3.03
SNX7-201ENST00000306121 DNAJC5BQ9UF47 199 aa33.95■■■■□ 3.03
SNX7-201ENST00000306121 KIF21BO75037 1637 aa33.9■■■■□ 3.02
SNX7-201ENST00000306121 GOLGA3Q08378 1498 aa33.88■■■■□ 3.01
SNX7-201ENST00000306121 CEP164Q9UPV0 1460 aa33.85■■■■□ 3.01
SNX7-201ENST00000306121 TNIKQ9UKE5 1360 aa33.82■■■■□ 3.01
SNX7-201ENST00000306121 DNMBPQ6XZF7 1577 aa33.79■■■■□ 3
SNX7-201ENST00000306121 FGD5Q6ZNL6 1462 aa33.76■■■□□ 2.99
SNX7-201ENST00000306121 KIF27Q86VH2 1401 aa33.75■■■□□ 2.99
SNX7-201ENST00000306121 PDS5BQ9NTI5 1447 aa33.73■■■□□ 2.99
SNX7-201ENST00000306121 TOPBP1Q92547 1522 aa33.7■■■□□ 2.98
SNX7-201ENST00000306121 CEP162Q5TB80 1403 aa33.68■■■□□ 2.98
SNX7-201ENST00000306121 UBTFP17480 764 aaKnown RBP33.67■■■□□ 2.98
SNX7-201ENST00000306121 RAPGEF2Q9Y4G8 1499 aa33.63■■■□□ 2.97
SNX7-201ENST00000306121 KIF21AQ7Z4S6 1674 aa33.62■■■□□ 2.97
SNX7-201ENST00000306121 PRXQ9BXM0 1461 aa33.62■■■□□ 2.97
SNX7-201ENST00000306121 ERICH3Q5RHP9 1530 aa33.6■■■□□ 2.97
SNX7-201ENST00000306121 CUX2O14529 1486 aa33.59■■■□□ 2.97
SNX7-201ENST00000306121 URB2Q14146 1524 aaKnown RBP33.59■■■□□ 2.97
SNX7-201ENST00000306121 POLA1P09884 1462 aaPredicted RBP33.56■■■□□ 2.96
SNX7-201ENST00000306121 ABCA10Q8WWZ4 1543 aa33.48■■■□□ 2.95
SNX7-201ENST00000306121 RAD54L2Q9Y4B4 1467 aa33.44■■■□□ 2.94
SNX7-201ENST00000306121 PCGF6Q9BYE7 350 aa33.44■■■□□ 2.94
SNX7-201ENST00000306121 IGF1RP08069 1367 aa33.42■■■□□ 2.94
SNX7-201ENST00000306121 WDR97A6NE52 1622 aa33.37■■■□□ 2.93
SNX7-201ENST00000306121 TRIM26Q12899 539 aaPredicted RBP33.36■■■□□ 2.93
SNX7-201ENST00000306121 CLIP1P30622 1438 aa33.34■■■□□ 2.93
SNX7-201ENST00000306121 MRC2Q9UBG0 1479 aa33.31■■■□□ 2.92
SNX7-201ENST00000306121 CARMIL1Q5VZK9 1371 aa33.25■■■□□ 2.91
SNX7-201ENST00000306121 ABCA5Q8WWZ7 1642 aa33.2■■■□□ 2.91
SNX7-201ENST00000306121 TARBP1Q13395 1621 aaKnown RBP33.18■■■□□ 2.9
SNX7-201ENST00000306121 CUL7Q14999 1698 aa33.17■■■□□ 2.9
SNX7-201ENST00000306121 WDR62O43379 1518 aa33.14■■■□□ 2.89
SNX7-201ENST00000306121 VPS8Q8N3P4 1428 aa33.1■■■□□ 2.89
SNX7-201ENST00000306121 GAPVD1Q14C86 1478 aa33.08■■■□□ 2.89
SNX7-201ENST00000306121 TDRD9Q8NDG6 1382 aaKnown RBP33.08■■■□□ 2.89
SNX7-201ENST00000306121 ERCC6Q03468 1493 aa33.05■■■□□ 2.88
SNX7-201ENST00000306121 PPARGC1BQ86YN6 1023 aaKnown RBP33.04■■■□□ 2.88
SNX7-201ENST00000306121 RANGAP1P46060 587 aaPredicted RBP33.03■■■□□ 2.88
SNX7-201ENST00000306121 ARAP1Q96P48 1450 aa33■■■□□ 2.87
SNX7-201ENST00000306121 THOC2Q8NI27 1593 aaKnown RBP32.97■■■□□ 2.87
SNX7-201ENST00000306121 IFT140Q96RY7 1462 aa32.94■■■□□ 2.86
SNX7-201ENST00000306121 ARHGAP35Q9NRY4 1499 aa32.92■■■□□ 2.86
SNX7-201ENST00000306121 PBRM1Q86U86 1689 aa32.91■■■□□ 2.86
SNX7-201ENST00000306121 CTTNBP2Q8WZ74 1663 aa32.86■■■□□ 2.85
SNX7-201ENST00000306121 AQRO60306 1485 aaKnown RBP eCLIP32.82■■■□□ 2.84
SNX7-201ENST00000306121 GRIN2BQ13224 1484 aa32.77■■■□□ 2.84
SNX7-201ENST00000306121 HRCP23327 699 aa32.76■■■□□ 2.83
SNX7-201ENST00000306121 ZNF608Q9ULD9 1512 aaPredicted RBP32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms