RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 NISCHQ9Y2I1 1504 aa46.37■■■■■ 5.01
RITA1-201ENST00000548278 CCDC180Q9P1Z9 1646 aa40.14■■■■■ 4.02
RITA1-201ENST00000548278 ZCCHC6Q5VYS8 1495 aaKnown RBP39.05■■■■□ 3.84
RITA1-201ENST00000548278 DCAF1Q9Y4B6 1507 aa38.29■■■■□ 3.72
RITA1-201ENST00000548278 SHROOM4Q9ULL8 1493 aa38.25■■■■□ 3.71
RITA1-201ENST00000548278 DCAF8L2P0C7V8 631 aa38.19■■■■□ 3.7
RITA1-201ENST00000548278 MYO15BQ96JP2 1530 aa37.64■■■■□ 3.62
RITA1-201ENST00000548278 ABCC9O60706 1549 aa37.63■■■■□ 3.61
RITA1-201ENST00000548278 NACADO15069 1562 aa37.29■■■■□ 3.56
RITA1-201ENST00000548278 SCRIBQ14160 1630 aa37.07■■■■□ 3.52
RITA1-201ENST00000548278 SUPT5HO00267 1087 aaKnown RBP37.03■■■■□ 3.52
RITA1-201ENST00000548278 RB1CC1Q8TDY2 1594 aa36.85■■■■□ 3.49
RITA1-201ENST00000548278 UNC13AQ9UPW8 1703 aa36.21■■■■□ 3.39
RITA1-201ENST00000548278 RSF1Q96T23 1441 aaPredicted RBP36.19■■■■□ 3.38
RITA1-201ENST00000548278 CECR2Q9BXF3 1484 aa36.05■■■■□ 3.36
RITA1-201ENST00000548278 MROH2BQ7Z745 1585 aa35.88■■■■□ 3.33
RITA1-201ENST00000548278 BICRAQ9NZM4 1560 aa35.81■■■■□ 3.32
RITA1-201ENST00000548278 BAZ1AQ9NRL2 1556 aaPredicted RBP35.73■■■■□ 3.31
RITA1-201ENST00000548278 CHIC1Q5VXU3 224 aa35.71■■■■□ 3.31
RITA1-201ENST00000548278 PABPN1Q86U42 306 aaKnown RBP eCLIP35.63■■■■□ 3.29
RITA1-201ENST00000548278 WIZO95785 1651 aa35.62■■■■□ 3.29
RITA1-201ENST00000548278 SMARCA4P51532 1647 aa35.54■■■■□ 3.28
RITA1-201ENST00000548278 TOP2AP11388 1531 aaKnown RBP35.21■■■■□ 3.23
RITA1-201ENST00000548278 PEG3Q9GZU2 1588 aa35.07■■■■□ 3.2
RITA1-201ENST00000548278 SMARCA2P51531 1590 aa34.92■■■■□ 3.18
RITA1-201ENST00000548278 CCDC88BA6NC98 1476 aa34.9■■■■□ 3.18
RITA1-201ENST00000548278 ATAD2BQ9ULI0 1458 aa34.85■■■■□ 3.17
RITA1-201ENST00000548278 EIF4G1Q04637 1599 aaKnown RBP34.84■■■■□ 3.17
RITA1-201ENST00000548278 TRIM41Q8WV44 630 aa34.74■■■■□ 3.15
RITA1-201ENST00000548278 BAZ1BQ9UIG0 1483 aaKnown RBP34.66■■■■□ 3.14
RITA1-201ENST00000548278 NCAPD3P42695 1498 aa34.44■■■■□ 3.1
RITA1-201ENST00000548278 HMGXB3Q12766 1538 aa34.41■■■■□ 3.1
RITA1-201ENST00000548278 LOC105371045A0A1W2PR82 267 aa34.4■■■■□ 3.1
RITA1-201ENST00000548278 ABCC8Q09428 1581 aa34.34■■■■□ 3.09
RITA1-201ENST00000548278 FAM9AQ8IZU1 332 aaPredicted RBP34.18■■■■□ 3.06
RITA1-201ENST00000548278 CC2D2AQ9P2K1 1620 aa34.04■■■■□ 3.04
RITA1-201ENST00000548278 WRNQ14191 1432 aaPredicted RBP eCLIP34.02■■■■□ 3.04
RITA1-201ENST00000548278 SYNJ1O43426 1573 aa33.89■■■■□ 3.02
RITA1-201ENST00000548278 CFTRP13569 1480 aa33.83■■■■□ 3.01
RITA1-201ENST00000548278 SOGA1O94964 1423 aa33.81■■■■□ 3
RITA1-201ENST00000548278 EEA1Q15075 1411 aa33.74■■■□□ 2.99
RITA1-201ENST00000548278 EHMT2Q96KQ7 1210 aa33.7■■■□□ 2.99
RITA1-201ENST00000548278 TOP2BQ02880 1626 aa33.68■■■□□ 2.98
RITA1-201ENST00000548278 RUSC2Q8N2Y8 1516 aa33.67■■■□□ 2.98
RITA1-201ENST00000548278 PRDM2Q13029 1718 aa33.65■■■□□ 2.98
RITA1-201ENST00000548278 BIVM-ERCC5R4GMW8 1640 aa33.63■■■□□ 2.97
RITA1-201ENST00000548278 CADPSQ9ULU8 1353 aa33.61■■■□□ 2.97
RITA1-201ENST00000548278 CSRNP3Q8WYN3 585 aa33.57■■■□□ 2.97
RITA1-201ENST00000548278 CUX1P39880 1505 aa33.51■■■□□ 2.96
RITA1-201ENST00000548278 TNIKQ9UKE5 1360 aa33.34■■■□□ 2.93
RITA1-201ENST00000548278 GOLGA3Q08378 1498 aa33.33■■■□□ 2.93
RITA1-201ENST00000548278 KIF21BO75037 1637 aa33.31■■■□□ 2.92
RITA1-201ENST00000548278 PCGF6Q9BYE7 350 aa33.3■■■□□ 2.92
RITA1-201ENST00000548278 CEP164Q9UPV0 1460 aa33.28■■■□□ 2.92
RITA1-201ENST00000548278 FANCD2Q9BXW9 1451 aa33.24■■■□□ 2.91
RITA1-201ENST00000548278 NESP48681 1621 aa33.21■■■□□ 2.91
RITA1-201ENST00000548278 CEP162Q5TB80 1403 aa33.21■■■□□ 2.91
RITA1-201ENST00000548278 UBTFP17480 764 aaKnown RBP33.19■■■□□ 2.9
RITA1-201ENST00000548278 LAMC3Q9Y6N6 1575 aa33.16■■■□□ 2.9
RITA1-201ENST00000548278 DNAJC5BQ9UF47 199 aa33.16■■■□□ 2.9
RITA1-201ENST00000548278 TRIM26Q12899 539 aaPredicted RBP33.14■■■□□ 2.9
RITA1-201ENST00000548278 KIF27Q86VH2 1401 aa33.1■■■□□ 2.89
RITA1-201ENST00000548278 RAPGEF2Q9Y4G8 1499 aa33.09■■■□□ 2.89
RITA1-201ENST00000548278 FGD5Q6ZNL6 1462 aa33.05■■■□□ 2.88
RITA1-201ENST00000548278 PRXQ9BXM0 1461 aa33.03■■■□□ 2.88
RITA1-201ENST00000548278 DNMBPQ6XZF7 1577 aa33.01■■■□□ 2.88
RITA1-201ENST00000548278 ERICH3Q5RHP9 1530 aa32.99■■■□□ 2.87
RITA1-201ENST00000548278 TOPBP1Q92547 1522 aa32.95■■■□□ 2.86
RITA1-201ENST00000548278 CUX2O14529 1486 aa32.94■■■□□ 2.86
RITA1-201ENST00000548278 PDS5BQ9NTI5 1447 aa32.9■■■□□ 2.86
RITA1-201ENST00000548278 CLIP1P30622 1438 aa32.84■■■□□ 2.85
RITA1-201ENST00000548278 POLA1P09884 1462 aaPredicted RBP32.83■■■□□ 2.85
RITA1-201ENST00000548278 URB2Q14146 1524 aaKnown RBP32.83■■■□□ 2.85
RITA1-201ENST00000548278 IGF1RP08069 1367 aa32.81■■■□□ 2.84
RITA1-201ENST00000548278 KIF21AQ7Z4S6 1674 aa32.78■■■□□ 2.84
RITA1-201ENST00000548278 ABCA10Q8WWZ4 1543 aa32.76■■■□□ 2.83
RITA1-201ENST00000548278 RAD54L2Q9Y4B4 1467 aa32.76■■■□□ 2.83
RITA1-201ENST00000548278 PPARGC1BQ86YN6 1023 aaKnown RBP32.75■■■□□ 2.83
RITA1-201ENST00000548278 HRCP23327 699 aa32.72■■■□□ 2.83
RITA1-201ENST00000548278 CARMIL1Q5VZK9 1371 aa32.63■■■□□ 2.81
RITA1-201ENST00000548278 VPS8Q8N3P4 1428 aa32.61■■■□□ 2.81
RITA1-201ENST00000548278 WDR97A6NE52 1622 aa32.61■■■□□ 2.81
RITA1-201ENST00000548278 RANGAP1P46060 587 aaPredicted RBP32.55■■■□□ 2.8
RITA1-201ENST00000548278 ARAP1Q96P48 1450 aa32.47■■■□□ 2.79
RITA1-201ENST00000548278 MRC2Q9UBG0 1479 aa32.46■■■□□ 2.79
RITA1-201ENST00000548278 ABCA5Q8WWZ7 1642 aa32.46■■■□□ 2.79
RITA1-201ENST00000548278 CUL7Q14999 1698 aa32.44■■■□□ 2.78
RITA1-201ENST00000548278 TARBP1Q13395 1621 aaKnown RBP32.42■■■□□ 2.78
RITA1-201ENST00000548278 TDRD9Q8NDG6 1382 aaKnown RBP32.39■■■□□ 2.78
RITA1-201ENST00000548278 ARHGAP35Q9NRY4 1499 aa32.38■■■□□ 2.77
RITA1-201ENST00000548278 TTBK1Q5TCY1 1321 aaPredicted RBP32.38■■■□□ 2.77
RITA1-201ENST00000548278 GAPVD1Q14C86 1478 aa32.36■■■□□ 2.77
RITA1-201ENST00000548278 WDR62O43379 1518 aa32.28■■■□□ 2.76
RITA1-201ENST00000548278 APLP2Q06481 763 aa32.26■■■□□ 2.75
RITA1-201ENST00000548278 CTTNBP2Q8WZ74 1663 aa32.17■■■□□ 2.74
RITA1-201ENST00000548278 ERCC6Q03468 1493 aa32.17■■■□□ 2.74
RITA1-201ENST00000548278 IFT140Q96RY7 1462 aa32.14■■■□□ 2.74
RITA1-201ENST00000548278 PBRM1Q86U86 1689 aa32.14■■■□□ 2.74
RITA1-201ENST00000548278 AQRO60306 1485 aaKnown RBP eCLIP32.11■■■□□ 2.73
RITA1-201ENST00000548278 THOC2Q8NI27 1593 aaKnown RBP32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms