RNA–Protein interactions for RNA: ENST00000371485.7

CEP55-201, Transcript of centrosomal protein 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CEP55, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP55-201ENST00000371485 NISCHQ9Y2I1 1504 aa38.98■■■■□ 3.83
CEP55-201ENST00000371485 SHROOM4Q9ULL8 1493 aa33.74■■■□□ 2.99
CEP55-201ENST00000371485 SUPT5HO00267 1087 aaKnown RBP33.23■■■□□ 2.91
CEP55-201ENST00000371485 ZCCHC6Q5VYS8 1495 aaKnown RBP33.03■■■□□ 2.88
CEP55-201ENST00000371485 CCDC180Q9P1Z9 1646 aa32.88■■■□□ 2.85
CEP55-201ENST00000371485 DCAF8L2P0C7V8 631 aa32.47■■■□□ 2.79
CEP55-201ENST00000371485 MYO15BQ96JP2 1530 aa32.41■■■□□ 2.78
CEP55-201ENST00000371485 CHIC1Q5VXU3 224 aa32.38■■■□□ 2.77
CEP55-201ENST00000371485 HRCP23327 699 aa31.98■■■□□ 2.71
CEP55-201ENST00000371485 DCAF1Q9Y4B6 1507 aa31.85■■■□□ 2.69
CEP55-201ENST00000371485 PCGF6Q9BYE7 350 aa31.83■■■□□ 2.69
CEP55-201ENST00000371485 LOC105371045A0A1W2PR82 267 aa31.54■■■□□ 2.64
CEP55-201ENST00000371485 PPARGC1BQ86YN6 1023 aaKnown RBP31.41■■■□□ 2.62
CEP55-201ENST00000371485 ABCC9O60706 1549 aa31.24■■■□□ 2.59
CEP55-201ENST00000371485 SCRIBQ14160 1630 aa31.07■■■□□ 2.57
CEP55-201ENST00000371485 RSF1Q96T23 1441 aaPredicted RBP31.03■■■□□ 2.56
CEP55-201ENST00000371485 TRIM26Q12899 539 aaPredicted RBP31.02■■■□□ 2.56
CEP55-201ENST00000371485 TRIM41Q8WV44 630 aa30.84■■■□□ 2.53
CEP55-201ENST00000371485 RB1CC1Q8TDY2 1594 aa30.81■■■□□ 2.52
CEP55-201ENST00000371485 FAM9AQ8IZU1 332 aaPredicted RBP30.73■■■□□ 2.51
CEP55-201ENST00000371485 EHMT2Q96KQ7 1210 aa30.57■■■□□ 2.48
CEP55-201ENST00000371485 CECR2Q9BXF3 1484 aa30.48■■■□□ 2.47
CEP55-201ENST00000371485 ZEB1P37275 1124 aaPredicted RBP30.42■■■□□ 2.46
CEP55-201ENST00000371485 MROH2BQ7Z745 1585 aa30.39■■■□□ 2.46
CEP55-201ENST00000371485 NACADO15069 1562 aa30.33■■■□□ 2.45
CEP55-201ENST00000371485 WIZO95785 1651 aa30.27■■■□□ 2.44
CEP55-201ENST00000371485 BAZ1AQ9NRL2 1556 aaPredicted RBP30.02■■■□□ 2.4
CEP55-201ENST00000371485 EIF4G1Q04637 1599 aaKnown RBP29.93■■■□□ 2.38
CEP55-201ENST00000371485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.84■■■□□ 2.37
CEP55-201ENST00000371485 PELP1Q8IZL8 1130 aaKnown RBP29.83■■■□□ 2.37
CEP55-201ENST00000371485 ABCC8Q09428 1581 aa29.77■■■□□ 2.36
CEP55-201ENST00000371485 SCAF1Q9H7N4 1312 aaKnown RBP29.76■■■□□ 2.35
CEP55-201ENST00000371485 CCER1Q8TC90 406 aaPredicted RBP29.74■■■□□ 2.35
CEP55-201ENST00000371485 CCDC88BA6NC98 1476 aa29.7■■■□□ 2.35
CEP55-201ENST00000371485 TOP2AP11388 1531 aaKnown RBP29.7■■■□□ 2.34
CEP55-201ENST00000371485 TTBK1Q5TCY1 1321 aaPredicted RBP29.66■■■□□ 2.34
CEP55-201ENST00000371485 SMARCA4P51532 1647 aa29.62■■■□□ 2.33
CEP55-201ENST00000371485 SMARCA2P51531 1590 aa29.59■■■□□ 2.33
CEP55-201ENST00000371485 SOGA1O94964 1423 aa29.54■■■□□ 2.32
CEP55-201ENST00000371485 CEP162Q5TB80 1403 aa29.54■■■□□ 2.32
CEP55-201ENST00000371485 WRNQ14191 1432 aaPredicted RBP eCLIP29.51■■■□□ 2.31
CEP55-201ENST00000371485 UNC13AQ9UPW8 1703 aa29.47■■■□□ 2.31
CEP55-201ENST00000371485 TNIKQ9UKE5 1360 aa29.4■■■□□ 2.3
CEP55-201ENST00000371485 RUSC2Q8N2Y8 1516 aa29.4■■■□□ 2.3
CEP55-201ENST00000371485 UBTFP17480 764 aaKnown RBP29.36■■■□□ 2.29
CEP55-201ENST00000371485 CSRNP3Q8WYN3 585 aa29.36■■■□□ 2.29
CEP55-201ENST00000371485 DIEXFQ68CQ4 756 aaKnown RBP29.33■■■□□ 2.29
CEP55-201ENST00000371485 ACIN1Q9UKV3 1341 aaKnown RBP29.31■■■□□ 2.28
CEP55-201ENST00000371485 NEUROD1Q13562 356 aa29.29■■■□□ 2.28
CEP55-201ENST00000371485 EEA1Q15075 1411 aa29.28■■■□□ 2.28
CEP55-201ENST00000371485 PABPN1Q86U42 306 aaKnown RBP eCLIP29.19■■■□□ 2.26
CEP55-201ENST00000371485 GOLGA3Q08378 1498 aa29.18■■■□□ 2.26
CEP55-201ENST00000371485 CENPBP07199 599 aaPredicted RBP29.05■■■□□ 2.24
CEP55-201ENST00000371485 BICRAQ9NZM4 1560 aa29.04■■■□□ 2.24
CEP55-201ENST00000371485 GTF3C3Q9Y5Q9 886 aa29.03■■■□□ 2.24
CEP55-201ENST00000371485 SYNJ1O43426 1573 aa29.01■■■□□ 2.23
CEP55-201ENST00000371485 ZNF316A6NFI3 1004 aaPredicted RBP28.98■■■□□ 2.23
CEP55-201ENST00000371485 CEP164Q9UPV0 1460 aa28.97■■■□□ 2.23
CEP55-201ENST00000371485 HNRNPUL2Q1KMD3 747 aaKnown RBP28.96■■■□□ 2.23
CEP55-201ENST00000371485 PEG3Q9GZU2 1588 aa28.95■■■□□ 2.22
CEP55-201ENST00000371485 KIF21BO75037 1637 aa28.91■■■□□ 2.22
CEP55-201ENST00000371485 CLIP1P30622 1438 aa28.9■■■□□ 2.22
CEP55-201ENST00000371485 RANGAP1P46060 587 aaPredicted RBP28.82■■■□□ 2.2
CEP55-201ENST00000371485 VPS8Q8N3P4 1428 aa28.8■■■□□ 2.2
CEP55-201ENST00000371485 RAPGEF2Q9Y4G8 1499 aa28.79■■■□□ 2.2
CEP55-201ENST00000371485 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
CEP55-201ENST00000371485 YTHDC1Q96MU7 727 aaKnown RBP28.77■■■□□ 2.2
CEP55-201ENST00000371485 BAZ1BQ9UIG0 1483 aaKnown RBP28.74■■■□□ 2.19
CEP55-201ENST00000371485 APLP2Q06481 763 aa28.73■■■□□ 2.19
CEP55-201ENST00000371485 MIER1Q8N108 512 aa28.68■■■□□ 2.18
CEP55-201ENST00000371485 MYT1Q01538 1121 aa28.67■■■□□ 2.18
CEP55-201ENST00000371485 TOP2BQ02880 1626 aa28.56■■■□□ 2.16
CEP55-201ENST00000371485 BIVM-ERCC5R4GMW8 1640 aa28.43■■■□□ 2.14
CEP55-201ENST00000371485 ARAP1Q96P48 1450 aa28.39■■■□□ 2.14
CEP55-201ENST00000371485 PRXQ9BXM0 1461 aa28.38■■■□□ 2.13
CEP55-201ENST00000371485 KANK4Q5T7N3 995 aaPredicted RBP28.37■■■□□ 2.13
CEP55-201ENST00000371485 ERICH3Q5RHP9 1530 aa28.37■■■□□ 2.13
CEP55-201ENST00000371485 DHX57Q6P158 1386 aaKnown RBP28.35■■■□□ 2.13
CEP55-201ENST00000371485 CLSPNQ9HAW4 1339 aa28.26■■■□□ 2.11
CEP55-201ENST00000371485 CUX1P39880 1505 aa28.25■■■□□ 2.11
CEP55-201ENST00000371485 KIF27Q86VH2 1401 aa28.18■■■□□ 2.1
CEP55-201ENST00000371485 RRBP1Q9P2E9 1410 aaKnown RBP28.16■■■□□ 2.1
CEP55-201ENST00000371485 HMGXB3Q12766 1538 aa28.11■■■□□ 2.09
CEP55-201ENST00000371485 NCAPD3P42695 1498 aa28.1■■■□□ 2.09
CEP55-201ENST00000371485 ITGAEP38570 1179 aa28.1■■■□□ 2.09
CEP55-201ENST00000371485 ARHGAP35Q9NRY4 1499 aa28.09■■■□□ 2.09
CEP55-201ENST00000371485 CCNB3Q8WWL7 1395 aa28.06■■■□□ 2.08
CEP55-201ENST00000371485 CFTRP13569 1480 aa28.01■■■□□ 2.07
CEP55-201ENST00000371485 CUX2O14529 1486 aa28■■■□□ 2.07
CEP55-201ENST00000371485 RAB3GAP2Q9H2M9 1393 aa27.89■■■□□ 2.06
CEP55-201ENST00000371485 IGF1RP08069 1367 aa27.87■■■□□ 2.05
CEP55-201ENST00000371485 SUPT16HQ9Y5B9 1047 aaKnown RBP27.86■■■□□ 2.05
CEP55-201ENST00000371485 TIAM1Q13009 1591 aa27.83■■■□□ 2.05
CEP55-201ENST00000371485 MAPKBP1O60336 1514 aa27.82■■■□□ 2.04
CEP55-201ENST00000371485 PRDM2Q13029 1718 aa27.77■■■□□ 2.04
CEP55-201ENST00000371485 CARMIL1Q5VZK9 1371 aa27.76■■■□□ 2.03
CEP55-201ENST00000371485 KCNH8Q96L42 1107 aa27.76■■■□□ 2.03
CEP55-201ENST00000371485 PHLDB1Q86UU1 1377 aa27.73■■■□□ 2.03
CEP55-201ENST00000371485 LRRC9Q6ZRR7 1453 aa27.73■■■□□ 2.03
CEP55-201ENST00000371485 SETD5Q9C0A6 1442 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms