RNA–Protein interactions for RNA: ENST00000295290.12

PACRGL-201, Transcript of parkin coregulated like, humanhuman

TSL 5 BASIC

Gene PACRGL, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-201ENST00000295290 NISCHQ9Y2I1 1504 aa52.03■■■■■ 5.92
PACRGL-201ENST00000295290 CCDC180Q9P1Z9 1646 aa45.7■■■■■ 4.91
PACRGL-201ENST00000295290 ABCC9O60706 1549 aa43.73■■■■■ 4.59
PACRGL-201ENST00000295290 ZCCHC6Q5VYS8 1495 aaKnown RBP43.58■■■■■ 4.57
PACRGL-201ENST00000295290 DCAF8L2P0C7V8 631 aa43.07■■■■■ 4.49
PACRGL-201ENST00000295290 DCAF1Q9Y4B6 1507 aa43.04■■■■■ 4.48
PACRGL-201ENST00000295290 MYO15BQ96JP2 1530 aa42.79■■■■■ 4.44
PACRGL-201ENST00000295290 NACADO15069 1562 aa42.7■■■■■ 4.43
PACRGL-201ENST00000295290 RB1CC1Q8TDY2 1594 aa42.48■■■■■ 4.39
PACRGL-201ENST00000295290 SHROOM4Q9ULL8 1493 aa41.9■■■■■ 4.3
PACRGL-201ENST00000295290 SCRIBQ14160 1630 aa41.88■■■■■ 4.29
PACRGL-201ENST00000295290 UNC13AQ9UPW8 1703 aa41.61■■■■■ 4.25
PACRGL-201ENST00000295290 BICRAQ9NZM4 1560 aa41.23■■■■■ 4.19
PACRGL-201ENST00000295290 PABPN1Q86U42 306 aaKnown RBP eCLIP41.08■■■■■ 4.17
PACRGL-201ENST00000295290 CECR2Q9BXF3 1484 aa40.47■■■■■ 4.07
PACRGL-201ENST00000295290 BAZ1AQ9NRL2 1556 aaPredicted RBP40.22■■■■■ 4.03
PACRGL-201ENST00000295290 MROH2BQ7Z745 1585 aa40.17■■■■■ 4.02
PACRGL-201ENST00000295290 SMARCA4P51532 1647 aa40.13■■■■■ 4.02
PACRGL-201ENST00000295290 RSF1Q96T23 1441 aaPredicted RBP40.1■■■■■ 4.01
PACRGL-201ENST00000295290 EIF4G1Q04637 1599 aaKnown RBP40.03■■■■■ 4
PACRGL-201ENST00000295290 SUPT5HO00267 1087 aaKnown RBP39.98■■■■□ 3.99
PACRGL-201ENST00000295290 WIZO95785 1651 aa39.79■■■■□ 3.96
PACRGL-201ENST00000295290 PEG3Q9GZU2 1588 aa39.7■■■■□ 3.95
PACRGL-201ENST00000295290 ATAD2BQ9ULI0 1458 aa39.63■■■■□ 3.93
PACRGL-201ENST00000295290 SMARCA2P51531 1590 aa39.59■■■■□ 3.93
PACRGL-201ENST00000295290 CC2D2AQ9P2K1 1620 aa39.59■■■■□ 3.93
PACRGL-201ENST00000295290 NCAPD3P42695 1498 aa39.41■■■■□ 3.9
PACRGL-201ENST00000295290 TOP2AP11388 1531 aaKnown RBP39.38■■■■□ 3.89
PACRGL-201ENST00000295290 BAZ1BQ9UIG0 1483 aaKnown RBP39.36■■■■□ 3.89
PACRGL-201ENST00000295290 HMGXB3Q12766 1538 aa39.31■■■■□ 3.88
PACRGL-201ENST00000295290 DNAJC5BQ9UF47 199 aa39.16■■■■□ 3.86
PACRGL-201ENST00000295290 CCDC88BA6NC98 1476 aa38.95■■■■□ 3.83
PACRGL-201ENST00000295290 CFTRP13569 1480 aa38.36■■■■□ 3.73
PACRGL-201ENST00000295290 CADPSQ9ULU8 1353 aa38.34■■■■□ 3.73
PACRGL-201ENST00000295290 NESP48681 1621 aa38.2■■■■□ 3.71
PACRGL-201ENST00000295290 LAMC3Q9Y6N6 1575 aa38.18■■■■□ 3.7
PACRGL-201ENST00000295290 PRDM2Q13029 1718 aa38.13■■■■□ 3.69
PACRGL-201ENST00000295290 CHIC1Q5VXU3 224 aa37.97■■■■□ 3.67
PACRGL-201ENST00000295290 ABCC8Q09428 1581 aa37.91■■■■□ 3.66
PACRGL-201ENST00000295290 FANCD2Q9BXW9 1451 aa37.91■■■■□ 3.66
PACRGL-201ENST00000295290 PDS5BQ9NTI5 1447 aa37.87■■■■□ 3.65
PACRGL-201ENST00000295290 KIF21AQ7Z4S6 1674 aa37.76■■■■□ 3.63
PACRGL-201ENST00000295290 WRNQ14191 1432 aaPredicted RBP eCLIP37.75■■■■□ 3.63
PACRGL-201ENST00000295290 CEP164Q9UPV0 1460 aa37.74■■■■□ 3.63
PACRGL-201ENST00000295290 TRIM41Q8WV44 630 aa37.66■■■■□ 3.62
PACRGL-201ENST00000295290 SYNJ1O43426 1573 aa37.64■■■■□ 3.62
PACRGL-201ENST00000295290 CUX1P39880 1505 aa37.59■■■■□ 3.61
PACRGL-201ENST00000295290 TOP2BQ02880 1626 aa37.55■■■■□ 3.6
PACRGL-201ENST00000295290 ERCC6Q03468 1493 aa37.55■■■■□ 3.6
PACRGL-201ENST00000295290 BIVM-ERCC5R4GMW8 1640 aa37.53■■■■□ 3.6
PACRGL-201ENST00000295290 URB2Q14146 1524 aaKnown RBP37.48■■■■□ 3.59
PACRGL-201ENST00000295290 DNMBPQ6XZF7 1577 aa37.46■■■■□ 3.59
PACRGL-201ENST00000295290 MRC2Q9UBG0 1479 aa37.44■■■■□ 3.58
PACRGL-201ENST00000295290 TOPBP1Q92547 1522 aa37.43■■■■□ 3.58
PACRGL-201ENST00000295290 THOC2Q8NI27 1593 aaKnown RBP37.33■■■■□ 3.57
PACRGL-201ENST00000295290 WDR62O43379 1518 aa37.29■■■■□ 3.56
PACRGL-201ENST00000295290 FGD5Q6ZNL6 1462 aa37.28■■■■□ 3.56
PACRGL-201ENST00000295290 POLA1P09884 1462 aaPredicted RBP37.21■■■■□ 3.55
PACRGL-201ENST00000295290 SOGA1O94964 1423 aa37.07■■■■□ 3.52
PACRGL-201ENST00000295290 RAD54L2Q9Y4B4 1467 aa37.06■■■■□ 3.52
PACRGL-201ENST00000295290 CUX2O14529 1486 aa37.01■■■■□ 3.52
PACRGL-201ENST00000295290 RUSC2Q8N2Y8 1516 aa36.97■■■■□ 3.51
PACRGL-201ENST00000295290 TARBP1Q13395 1621 aaKnown RBP36.95■■■■□ 3.51
PACRGL-201ENST00000295290 ABCA10Q8WWZ4 1543 aa36.95■■■■□ 3.51
PACRGL-201ENST00000295290 FAM9AQ8IZU1 332 aaPredicted RBP36.92■■■■□ 3.5
PACRGL-201ENST00000295290 WDR97A6NE52 1622 aa36.91■■■■□ 3.5
PACRGL-201ENST00000295290 IFT140Q96RY7 1462 aa36.88■■■■□ 3.49
PACRGL-201ENST00000295290 EEA1Q15075 1411 aa36.86■■■■□ 3.49
PACRGL-201ENST00000295290 KIF27Q86VH2 1401 aa36.85■■■■□ 3.49
PACRGL-201ENST00000295290 TDRD9Q8NDG6 1382 aaKnown RBP36.75■■■■□ 3.47
PACRGL-201ENST00000295290 ABCA5Q8WWZ7 1642 aa36.72■■■■□ 3.47
PACRGL-201ENST00000295290 CSRNP3Q8WYN3 585 aa36.71■■■■□ 3.47
PACRGL-201ENST00000295290 ZNF608Q9ULD9 1512 aaPredicted RBP36.7■■■■□ 3.47
PACRGL-201ENST00000295290 GAPVD1Q14C86 1478 aa36.65■■■■□ 3.46
PACRGL-201ENST00000295290 AQRO60306 1485 aaKnown RBP eCLIP36.63■■■■□ 3.45
PACRGL-201ENST00000295290 IGF1RP08069 1367 aa36.6■■■■□ 3.45
PACRGL-201ENST00000295290 EIF4G3O43432 1585 aaKnown RBP36.57■■■■□ 3.45
PACRGL-201ENST00000295290 ERICH3Q5RHP9 1530 aa36.51■■■■□ 3.44
PACRGL-201ENST00000295290 PBRM1Q86U86 1689 aa36.5■■■■□ 3.43
PACRGL-201ENST00000295290 GRIN2BQ13224 1484 aa36.46■■■■□ 3.43
PACRGL-201ENST00000295290 LOC105371045A0A1W2PR82 267 aa36.46■■■■□ 3.43
PACRGL-201ENST00000295290 PRXQ9BXM0 1461 aa36.46■■■■□ 3.43
PACRGL-201ENST00000295290 KIF21BO75037 1637 aa36.44■■■■□ 3.42
PACRGL-201ENST00000295290 EHMT2Q96KQ7 1210 aa36.4■■■■□ 3.42
PACRGL-201ENST00000295290 CUL7Q14999 1698 aa36.39■■■■□ 3.42
PACRGL-201ENST00000295290 CARMIL1Q5VZK9 1371 aa36.39■■■■□ 3.42
PACRGL-201ENST00000295290 RAPGEF2Q9Y4G8 1499 aa36.34■■■■□ 3.41
PACRGL-201ENST00000295290 GOLGA3Q08378 1498 aa36.32■■■■□ 3.4
PACRGL-201ENST00000295290 SNAPC4Q5SXM2 1469 aa36.29■■■■□ 3.4
PACRGL-201ENST00000295290 ADAMTS12P58397 1594 aa36.27■■■■□ 3.4
PACRGL-201ENST00000295290 FHAD1B1AJZ9 1412 aa36.24■■■■□ 3.39
PACRGL-201ENST00000295290 MAGI1Q96QZ7 1491 aaPredicted RBP36.24■■■■□ 3.39
PACRGL-201ENST00000295290 UBTFP17480 764 aaKnown RBP36.14■■■■□ 3.38
PACRGL-201ENST00000295290 SYNJ2O15056 1496 aa36.1■■■■□ 3.37
PACRGL-201ENST00000295290 TNIKQ9UKE5 1360 aa36.08■■■■□ 3.37
PACRGL-201ENST00000295290 GRIN2AQ12879 1464 aa36.02■■■■□ 3.36
PACRGL-201ENST00000295290 CHMP7Q8WUX9 453 aaPredicted RBP36■■■■□ 3.35
PACRGL-201ENST00000295290 FBLN2P98095 1184 aa35.96■■■■□ 3.35
PACRGL-201ENST00000295290 CHD1O14646 1710 aa35.9■■■■□ 3.34
PACRGL-201ENST00000295290 CTTNBP2Q8WZ74 1663 aa35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms