Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTCHD4Q6ZW05 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTCHD4Q6ZW05 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTCHD4Q6ZW05 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
PTCHD4Q6ZW05 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.33■□□□□ 0.68
PTCHD4Q6ZW05 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTCHD4Q6ZW05 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTCHD4Q6ZW05 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTCHD4Q6ZW05 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PTCHD4Q6ZW05 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 OR2I1P-207ENST00000453522 948 ntBASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.32■□□□□ 0.68
PTCHD4Q6ZW05 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 AC010525.1-201ENST00000585559 441 ntBASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 MIR4466-201ENST00000606121 54 ntBASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 AL049796.1-201ENST00000565336 1766 ntBASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCHD4Q6ZW05 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCHD4Q6ZW05 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 AC092171.4-201ENST00000609130 632 ntBASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PTCHD4Q6ZW05 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PTCHD4Q6ZW05 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.28■□□□□ 0.68
PTCHD4Q6ZW05 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTCHD4Q6ZW05 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms