RNA–Protein interactions for RNA: ENST00000540489.6

NTRK3-206, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 5 BASIC

Gene NTRK3, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-206ENST00000540489 NISCHQ9Y2I1 1504 aa43.16■■■■■ 4.5
NTRK3-206ENST00000540489 CCDC180Q9P1Z9 1646 aa37.1■■■■□ 3.53
NTRK3-206ENST00000540489 ZCCHC6Q5VYS8 1495 aaKnown RBP36.49■■■■□ 3.43
NTRK3-206ENST00000540489 SHROOM4Q9ULL8 1493 aa36.02■■■■□ 3.36
NTRK3-206ENST00000540489 DCAF1Q9Y4B6 1507 aa35.7■■■■□ 3.31
NTRK3-206ENST00000540489 DCAF8L2P0C7V8 631 aa35.3■■■■□ 3.24
NTRK3-206ENST00000540489 SUPT5HO00267 1087 aaKnown RBP35.26■■■■□ 3.23
NTRK3-206ENST00000540489 MYO15BQ96JP2 1530 aa34.84■■■■□ 3.17
NTRK3-206ENST00000540489 ABCC9O60706 1549 aa34.39■■■■□ 3.1
NTRK3-206ENST00000540489 CHIC1Q5VXU3 224 aa34.35■■■■□ 3.09
NTRK3-206ENST00000540489 NACADO15069 1562 aa34.29■■■■□ 3.08
NTRK3-206ENST00000540489 SCRIBQ14160 1630 aa34.28■■■■□ 3.08
NTRK3-206ENST00000540489 RSF1Q96T23 1441 aaPredicted RBP33.93■■■■□ 3.02
NTRK3-206ENST00000540489 RB1CC1Q8TDY2 1594 aa33.73■■■□□ 2.99
NTRK3-206ENST00000540489 CECR2Q9BXF3 1484 aa33.42■■■□□ 2.94
NTRK3-206ENST00000540489 MROH2BQ7Z745 1585 aa33.37■■■□□ 2.93
NTRK3-206ENST00000540489 BAZ1AQ9NRL2 1556 aaPredicted RBP33.25■■■□□ 2.91
NTRK3-206ENST00000540489 WIZO95785 1651 aa33.17■■■□□ 2.9
NTRK3-206ENST00000540489 TRIM41Q8WV44 630 aa33.08■■■□□ 2.89
NTRK3-206ENST00000540489 LOC105371045A0A1W2PR82 267 aa33.05■■■□□ 2.88
NTRK3-206ENST00000540489 UNC13AQ9UPW8 1703 aa33.05■■■□□ 2.88
NTRK3-206ENST00000540489 SMARCA4P51532 1647 aa32.94■■■□□ 2.86
NTRK3-206ENST00000540489 TOP2AP11388 1531 aaKnown RBP32.88■■■□□ 2.85
NTRK3-206ENST00000540489 HRCP23327 699 aa32.84■■■□□ 2.85
NTRK3-206ENST00000540489 PCGF6Q9BYE7 350 aa32.81■■■□□ 2.84
NTRK3-206ENST00000540489 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
NTRK3-206ENST00000540489 BICRAQ9NZM4 1560 aa32.65■■■□□ 2.82
NTRK3-206ENST00000540489 SMARCA2P51531 1590 aa32.59■■■□□ 2.81
NTRK3-206ENST00000540489 TRIM26Q12899 539 aaPredicted RBP32.56■■■□□ 2.8
NTRK3-206ENST00000540489 CCDC88BA6NC98 1476 aa32.55■■■□□ 2.8
NTRK3-206ENST00000540489 FAM9AQ8IZU1 332 aaPredicted RBP32.49■■■□□ 2.79
NTRK3-206ENST00000540489 PEG3Q9GZU2 1588 aa32.48■■■□□ 2.79
NTRK3-206ENST00000540489 PABPN1Q86U42 306 aaKnown RBP eCLIP32.35■■■□□ 2.77
NTRK3-206ENST00000540489 ABCC8Q09428 1581 aa32.23■■■□□ 2.75
NTRK3-206ENST00000540489 EEA1Q15075 1411 aa32.12■■■□□ 2.73
NTRK3-206ENST00000540489 ATAD2BQ9ULI0 1458 aa32.1■■■□□ 2.73
NTRK3-206ENST00000540489 BAZ1BQ9UIG0 1483 aaKnown RBP32.02■■■□□ 2.72
NTRK3-206ENST00000540489 EHMT2Q96KQ7 1210 aa31.97■■■□□ 2.71
NTRK3-206ENST00000540489 ZEB1P37275 1124 aaPredicted RBP31.93■■■□□ 2.7
NTRK3-206ENST00000540489 WRNQ14191 1432 aaPredicted RBP eCLIP31.92■■■□□ 2.7
NTRK3-206ENST00000540489 SOGA1O94964 1423 aa31.87■■■□□ 2.69
NTRK3-206ENST00000540489 TNIKQ9UKE5 1360 aa31.82■■■□□ 2.69
NTRK3-206ENST00000540489 PPARGC1BQ86YN6 1023 aaKnown RBP31.81■■■□□ 2.68
NTRK3-206ENST00000540489 CSRNP3Q8WYN3 585 aa31.79■■■□□ 2.68
NTRK3-206ENST00000540489 CEP162Q5TB80 1403 aa31.73■■■□□ 2.67
NTRK3-206ENST00000540489 SYNJ1O43426 1573 aa31.71■■■□□ 2.67
NTRK3-206ENST00000540489 GOLGA3Q08378 1498 aa31.7■■■□□ 2.67
NTRK3-206ENST00000540489 HMGXB3Q12766 1538 aa31.7■■■□□ 2.67
NTRK3-206ENST00000540489 RUSC2Q8N2Y8 1516 aa31.66■■■□□ 2.66
NTRK3-206ENST00000540489 NCAPD3P42695 1498 aa31.64■■■□□ 2.66
NTRK3-206ENST00000540489 KIF21BO75037 1637 aa31.6■■■□□ 2.65
NTRK3-206ENST00000540489 CEP164Q9UPV0 1460 aa31.59■■■□□ 2.65
NTRK3-206ENST00000540489 TOP2BQ02880 1626 aa31.52■■■□□ 2.64
NTRK3-206ENST00000540489 UBTFP17480 764 aaKnown RBP31.51■■■□□ 2.63
NTRK3-206ENST00000540489 BIVM-ERCC5R4GMW8 1640 aa31.46■■■□□ 2.63
NTRK3-206ENST00000540489 CFTRP13569 1480 aa31.26■■■□□ 2.59
NTRK3-206ENST00000540489 CLIP1P30622 1438 aa31.23■■■□□ 2.59
NTRK3-206ENST00000540489 ERICH3Q5RHP9 1530 aa31.19■■■□□ 2.58
NTRK3-206ENST00000540489 RAPGEF2Q9Y4G8 1499 aa31.18■■■□□ 2.58
NTRK3-206ENST00000540489 PRDM2Q13029 1718 aa31.17■■■□□ 2.58
NTRK3-206ENST00000540489 CUX1P39880 1505 aa31.14■■■□□ 2.58
NTRK3-206ENST00000540489 VPS8Q8N3P4 1428 aa31.13■■■□□ 2.57
NTRK3-206ENST00000540489 PRXQ9BXM0 1461 aa31.08■■■□□ 2.57
NTRK3-206ENST00000540489 CCER1Q8TC90 406 aaPredicted RBP31.08■■■□□ 2.57
NTRK3-206ENST00000540489 KIF27Q86VH2 1401 aa31.03■■■□□ 2.56
NTRK3-206ENST00000540489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.01■■■□□ 2.56
NTRK3-206ENST00000540489 TTBK1Q5TCY1 1321 aaPredicted RBP30.93■■■□□ 2.54
NTRK3-206ENST00000540489 CADPSQ9ULU8 1353 aa30.92■■■□□ 2.54
NTRK3-206ENST00000540489 APLP2Q06481 763 aa30.91■■■□□ 2.54
NTRK3-206ENST00000540489 CC2D2AQ9P2K1 1620 aa30.84■■■□□ 2.53
NTRK3-206ENST00000540489 ARAP1Q96P48 1450 aa30.75■■■□□ 2.51
NTRK3-206ENST00000540489 CUX2O14529 1486 aa30.67■■■□□ 2.5
NTRK3-206ENST00000540489 FGD5Q6ZNL6 1462 aa30.63■■■□□ 2.49
NTRK3-206ENST00000540489 RANGAP1P46060 587 aaPredicted RBP30.61■■■□□ 2.49
NTRK3-206ENST00000540489 IGF1RP08069 1367 aa30.6■■■□□ 2.49
NTRK3-206ENST00000540489 FANCD2Q9BXW9 1451 aa30.59■■■□□ 2.49
NTRK3-206ENST00000540489 ARHGAP35Q9NRY4 1499 aa30.53■■■□□ 2.48
NTRK3-206ENST00000540489 DNMBPQ6XZF7 1577 aa30.53■■■□□ 2.48
NTRK3-206ENST00000540489 HNRNPUL2Q1KMD3 747 aaKnown RBP30.51■■■□□ 2.47
NTRK3-206ENST00000540489 CARMIL1Q5VZK9 1371 aa30.49■■■□□ 2.47
NTRK3-206ENST00000540489 MAP3K1Q13233 1512 aa30.4■■■□□ 2.46
NTRK3-206ENST00000540489 ABCA10Q8WWZ4 1543 aa30.4■■■□□ 2.46
NTRK3-206ENST00000540489 RRBP1Q9P2E9 1410 aaKnown RBP30.39■■■□□ 2.45
NTRK3-206ENST00000540489 LAMC3Q9Y6N6 1575 aa30.38■■■□□ 2.45
NTRK3-206ENST00000540489 TOPBP1Q92547 1522 aa30.38■■■□□ 2.45
NTRK3-206ENST00000540489 CLSPNQ9HAW4 1339 aa30.33■■■□□ 2.45
NTRK3-206ENST00000540489 KANK4Q5T7N3 995 aaPredicted RBP30.32■■■□□ 2.44
NTRK3-206ENST00000540489 DIEXFQ68CQ4 756 aaKnown RBP30.32■■■□□ 2.44
NTRK3-206ENST00000540489 POLA1P09884 1462 aaPredicted RBP30.31■■■□□ 2.44
NTRK3-206ENST00000540489 CUL7Q14999 1698 aa30.29■■■□□ 2.44
NTRK3-206ENST00000540489 ZNF316A6NFI3 1004 aaPredicted RBP30.27■■■□□ 2.44
NTRK3-206ENST00000540489 FHAD1B1AJZ9 1412 aa30.25■■■□□ 2.43
NTRK3-206ENST00000540489 TIAM1Q13009 1591 aa30.25■■■□□ 2.43
NTRK3-206ENST00000540489 NESP48681 1621 aa30.24■■■□□ 2.43
NTRK3-206ENST00000540489 RAD54L2Q9Y4B4 1467 aa30.22■■■□□ 2.43
NTRK3-206ENST00000540489 CCNB3Q8WWL7 1395 aa30.2■■■□□ 2.42
NTRK3-206ENST00000540489 EFCAB5A4FU69 1503 aa30.19■■■□□ 2.42
NTRK3-206ENST00000540489 WDR97A6NE52 1622 aa30.17■■■□□ 2.42
NTRK3-206ENST00000540489 PDS5BQ9NTI5 1447 aa30.13■■■□□ 2.41
NTRK3-206ENST00000540489 URB2Q14146 1524 aaKnown RBP30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms