RNA–Protein interactions for RNA: ENST00000264025.7

NECTIN1-201, Transcript of nectin cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-201ENST00000264025 DCAF8L2P0C7V8 631 aa33.28■■■□□ 2.92
NECTIN1-201ENST00000264025 SUPT5HO00267 1087 aaKnown RBP31.6■■■□□ 2.65
NECTIN1-201ENST00000264025 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
NECTIN1-201ENST00000264025 SHROOM4Q9ULL8 1493 aa30.87■■■□□ 2.53
NECTIN1-201ENST00000264025 EHMT2Q96KQ7 1210 aa30.71■■■□□ 2.51
NECTIN1-201ENST00000264025 PELP1Q8IZL8 1130 aaKnown RBP30.68■■■□□ 2.5
NECTIN1-201ENST00000264025 APLP2Q06481 763 aa30.4■■■□□ 2.46
NECTIN1-201ENST00000264025 FAM9AQ8IZU1 332 aaPredicted RBP29.93■■■□□ 2.38
NECTIN1-201ENST00000264025 TTBK1Q5TCY1 1321 aaPredicted RBP29.73■■■□□ 2.35
NECTIN1-201ENST00000264025 PCGF6Q9BYE7 350 aa29.62■■■□□ 2.33
NECTIN1-201ENST00000264025 CENPBP07199 599 aaPredicted RBP29.42■■■□□ 2.3
NECTIN1-201ENST00000264025 RANGAP1P46060 587 aaPredicted RBP29.39■■■□□ 2.29
NECTIN1-201ENST00000264025 ERICH6Q7L0X2 663 aa29.38■■■□□ 2.29
NECTIN1-201ENST00000264025 ZEB1P37275 1124 aaPredicted RBP29.36■■■□□ 2.29
NECTIN1-201ENST00000264025 CCER1Q8TC90 406 aaPredicted RBP29.32■■■□□ 2.28
NECTIN1-201ENST00000264025 TRIM41Q8WV44 630 aa29.29■■■□□ 2.28
NECTIN1-201ENST00000264025 ATP1B4Q9UN42 357 aaPredicted RBP29.23■■■□□ 2.27
NECTIN1-201ENST00000264025 UBTFP17480 764 aaKnown RBP29.05■■■□□ 2.24
NECTIN1-201ENST00000264025 NEFLP07196 543 aa28.9■■■□□ 2.22
NECTIN1-201ENST00000264025 YTHDC1Q96MU7 727 aaKnown RBP28.7■■■□□ 2.18
NECTIN1-201ENST00000264025 PPARGC1BQ86YN6 1023 aaKnown RBP28.45■■■□□ 2.14
NECTIN1-201ENST00000264025 MYT1Q01538 1121 aa28.39■■■□□ 2.13
NECTIN1-201ENST00000264025 TRIM26Q12899 539 aaPredicted RBP28.34■■■□□ 2.13
NECTIN1-201ENST00000264025 MYT1LQ9UL68 1186 aa28.19■■■□□ 2.1
NECTIN1-201ENST00000264025 ITGAEP38570 1179 aa28.18■■■□□ 2.1
NECTIN1-201ENST00000264025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.17■■■□□ 2.1
NECTIN1-201ENST00000264025 HNRNPUL2Q1KMD3 747 aaKnown RBP28.17■■■□□ 2.1
NECTIN1-201ENST00000264025 DAXXQ9UER7 740 aaPredicted RBP28.16■■■□□ 2.1
NECTIN1-201ENST00000264025 POLR3GLQ9BT43 218 aa28.14■■■□□ 2.1
NECTIN1-201ENST00000264025 HRCP23327 699 aa28.02■■■□□ 2.08
NECTIN1-201ENST00000264025 LOC105371045A0A1W2PR82 267 aa27.83■■■□□ 2.05
NECTIN1-201ENST00000264025 CNGB1Q14028 1251 aaPredicted RBP27.8■■■□□ 2.04
NECTIN1-201ENST00000264025 CHIC1Q5VXU3 224 aa27.74■■■□□ 2.03
NECTIN1-201ENST00000264025 SLC4A1APQ9BWU0 796 aaKnown RBP27.65■■■□□ 2.02
NECTIN1-201ENST00000264025 CLSPNQ9HAW4 1339 aa27.5■■□□□ 1.99
NECTIN1-201ENST00000264025 ZNF316A6NFI3 1004 aaPredicted RBP27.47■■□□□ 1.99
NECTIN1-201ENST00000264025 DIEXFQ68CQ4 756 aaKnown RBP27.45■■□□□ 1.99
NECTIN1-201ENST00000264025 FAM50AQ14320 339 aaKnown RBP27.44■■□□□ 1.98
NECTIN1-201ENST00000264025 RTL5Q5HYW3 569 aaPredicted RBP27.44■■□□□ 1.98
NECTIN1-201ENST00000264025 TRIM52Q96A61 297 aa27.36■■□□□ 1.97
NECTIN1-201ENST00000264025 NEUROD1Q13562 356 aa27.22■■□□□ 1.95
NECTIN1-201ENST00000264025 ANP32CO43423 234 aa27.08■■□□□ 1.92
NECTIN1-201ENST00000264025 ZNF326Q5BKZ1 582 aaKnown RBP27.06■■□□□ 1.92
NECTIN1-201ENST00000264025 PABPN1Q86U42 306 aaKnown RBP eCLIP27.03■■□□□ 1.92
NECTIN1-201ENST00000264025 ZBTB47Q9UFB7 747 aaPredicted RBP27.01■■□□□ 1.92
NECTIN1-201ENST00000264025 BCANQ96GW7 911 aa27■■□□□ 1.91
NECTIN1-201ENST00000264025 CDK11AQ9UQ88 783 aaPredicted RBP26.92■■□□□ 1.9
NECTIN1-201ENST00000264025 ABCC9O60706 1549 aa26.89■■□□□ 1.9
NECTIN1-201ENST00000264025 GTF3C3Q9Y5Q9 886 aa26.87■■□□□ 1.89
NECTIN1-201ENST00000264025 FBLN2P98095 1184 aa26.85■■□□□ 1.89
NECTIN1-201ENST00000264025 CANXP27824 592 aaKnown RBP26.82■■□□□ 1.88
NECTIN1-201ENST00000264025 NEFMP07197 916 aa26.76■■□□□ 1.87
NECTIN1-201ENST00000264025 SLC24A1O60721 1099 aa26.73■■□□□ 1.87
NECTIN1-201ENST00000264025 BCL11AQ9H165 835 aa26.65■■□□□ 1.86
NECTIN1-201ENST00000264025 P3H3Q8IVL6 736 aa26.61■■□□□ 1.85
NECTIN1-201ENST00000264025 ARID3CA6NKF2 412 aa26.58■■□□□ 1.85
NECTIN1-201ENST00000264025 CSRNP3Q8WYN3 585 aa26.55■■□□□ 1.84
NECTIN1-201ENST00000264025 ANP32AP39687 249 aaKnown RBP26.52■■□□□ 1.84
NECTIN1-201ENST00000264025 ZNF777Q9ULD5 760 aaPredicted RBP26.52■■□□□ 1.84
NECTIN1-201ENST00000264025 ACIN1Q9UKV3 1341 aaKnown RBP26.43■■□□□ 1.82
NECTIN1-201ENST00000264025 NPM2Q86SE8 214 aaKnown RBP26.34■■□□□ 1.81
NECTIN1-201ENST00000264025 ESF1Q9H501 851 aaKnown RBP26.31■■□□□ 1.8
NECTIN1-201ENST00000264025 TONSLQ96HA7 1378 aa26.31■■□□□ 1.8
NECTIN1-201ENST00000264025 CHGAP10645 457 aaKnown RBP26.23■■□□□ 1.79
NECTIN1-201ENST00000264025 STAG3Q9UJ98 1225 aa26.21■■□□□ 1.79
NECTIN1-201ENST00000264025 ANP32BQ92688 251 aaKnown RBP26.2■■□□□ 1.79
NECTIN1-201ENST00000264025 FKBP8Q14318 412 aa26.2■■□□□ 1.78
NECTIN1-201ENST00000264025 HSP90AA1P07900 732 aaKnown RBP26.19■■□□□ 1.78
NECTIN1-201ENST00000264025 UPF2Q9HAU5 1272 aaKnown RBP26.17■■□□□ 1.78
NECTIN1-201ENST00000264025 HNRNPUQ00839 825 aaKnown RBP eCLIP26.17■■□□□ 1.78
NECTIN1-201ENST00000264025 FAM9BQ8IZU0 186 aa26.11■■□□□ 1.77
NECTIN1-201ENST00000264025 DDX10Q13206 875 aaKnown RBP26.08■■□□□ 1.77
NECTIN1-201ENST00000264025 NPM1P06748 294 aaKnown RBP eCLIP26.05■■□□□ 1.76
NECTIN1-201ENST00000264025 SALL2Q9Y467 1007 aaPredicted RBP26■■□□□ 1.75
NECTIN1-201ENST00000264025 TMC1Q8TDI8 760 aa25.99■■□□□ 1.75
NECTIN1-201ENST00000264025 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.99■■□□□ 1.75
NECTIN1-201ENST00000264025 CHIC2Q9UKJ5 165 aa25.96■■□□□ 1.75
NECTIN1-201ENST00000264025 SCRIBQ14160 1630 aa25.95■■□□□ 1.74
NECTIN1-201ENST00000264025 PLPPR3Q6T4P5 718 aa25.95■■□□□ 1.74
NECTIN1-201ENST00000264025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.94■■□□□ 1.74
NECTIN1-201ENST00000264025 CCDC136Q96JN2 1154 aa25.94■■□□□ 1.74
NECTIN1-201ENST00000264025 WDR43Q15061 677 aaKnown RBP eCLIP25.92■■□□□ 1.74
NECTIN1-201ENST00000264025 EIF5BO60841 1220 aaKnown RBP25.91■■□□□ 1.74
NECTIN1-201ENST00000264025 DCAF1Q9Y4B6 1507 aa25.89■■□□□ 1.73
NECTIN1-201ENST00000264025 TSPY4P0CV99 314 aa25.87■■□□□ 1.73
NECTIN1-201ENST00000264025 TSPY10P0CW01 314 aa25.87■■□□□ 1.73
NECTIN1-201ENST00000264025 MRS2Q9HD23 443 aa25.84■■□□□ 1.73
NECTIN1-201ENST00000264025 KDM2AQ9Y2K7 1162 aa25.81■■□□□ 1.72
NECTIN1-201ENST00000264025 MTUS2Q5JR59 1369 aa25.79■■□□□ 1.72
NECTIN1-201ENST00000264025 MYH16Q9H6N6 1097 aa25.71■■□□□ 1.71
NECTIN1-201ENST00000264025 NBR1Q14596 966 aa25.7■■□□□ 1.7
NECTIN1-201ENST00000264025 EIF4G2P78344 907 aaKnown RBP eCLIP25.64■■□□□ 1.7
NECTIN1-201ENST00000264025 CHMP7Q8WUX9 453 aaPredicted RBP25.63■■□□□ 1.69
NECTIN1-201ENST00000264025 GLIPR1L2Q4G1C9 344 aa25.62■■□□□ 1.69
NECTIN1-201ENST00000264025 ZCCHC6Q5VYS8 1495 aaKnown RBP25.62■■□□□ 1.69
NECTIN1-201ENST00000264025 ARXQ96QS3 562 aa25.62■■□□□ 1.69
NECTIN1-201ENST00000264025 SCAF1Q9H7N4 1312 aaKnown RBP25.62■■□□□ 1.69
NECTIN1-201ENST00000264025 CLIP1P30622 1438 aa25.59■■□□□ 1.69
NECTIN1-201ENST00000264025 IRX6P78412 446 aaPredicted RBP25.57■■□□□ 1.68
NECTIN1-201ENST00000264025 MIER1Q8N108 512 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms