RNA–Protein interactions for RNA: ENST00000561734.5

RPUSD1-202, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-202ENST00000561734 NISCHQ9Y2I1 1504 aa42.22■■■■■ 4.35
RPUSD1-202ENST00000561734 CCDC180Q9P1Z9 1646 aa35.94■■■■□ 3.34
RPUSD1-202ENST00000561734 SHROOM4Q9ULL8 1493 aa35.92■■■■□ 3.34
RPUSD1-202ENST00000561734 ZCCHC6Q5VYS8 1495 aaKnown RBP35.74■■■■□ 3.31
RPUSD1-202ENST00000561734 SUPT5HO00267 1087 aaKnown RBP35.19■■■■□ 3.22
RPUSD1-202ENST00000561734 DCAF8L2P0C7V8 631 aa34.87■■■■□ 3.17
RPUSD1-202ENST00000561734 DCAF1Q9Y4B6 1507 aa34.67■■■■□ 3.14
RPUSD1-202ENST00000561734 CHIC1Q5VXU3 224 aa34.26■■■■□ 3.07
RPUSD1-202ENST00000561734 MYO15BQ96JP2 1530 aa34.18■■■■□ 3.06
RPUSD1-202ENST00000561734 ABCC9O60706 1549 aa33.73■■■□□ 2.99
RPUSD1-202ENST00000561734 SCRIBQ14160 1630 aa33.65■■■□□ 2.98
RPUSD1-202ENST00000561734 RSF1Q96T23 1441 aaPredicted RBP33.4■■■□□ 2.94
RPUSD1-202ENST00000561734 LOC105371045A0A1W2PR82 267 aa33.21■■■□□ 2.91
RPUSD1-202ENST00000561734 NACADO15069 1562 aa33.2■■■□□ 2.91
RPUSD1-202ENST00000561734 HRCP23327 699 aa33.19■■■□□ 2.9
RPUSD1-202ENST00000561734 PCGF6Q9BYE7 350 aa33.15■■■□□ 2.9
RPUSD1-202ENST00000561734 RB1CC1Q8TDY2 1594 aa33.07■■■□□ 2.88
RPUSD1-202ENST00000561734 CECR2Q9BXF3 1484 aa32.91■■■□□ 2.86
RPUSD1-202ENST00000561734 MROH2BQ7Z745 1585 aa32.82■■■□□ 2.84
RPUSD1-202ENST00000561734 TRIM41Q8WV44 630 aa32.8■■■□□ 2.84
RPUSD1-202ENST00000561734 WIZO95785 1651 aa32.65■■■□□ 2.82
RPUSD1-202ENST00000561734 TRIM26Q12899 539 aaPredicted RBP32.56■■■□□ 2.8
RPUSD1-202ENST00000561734 FAM9AQ8IZU1 332 aaPredicted RBP32.51■■■□□ 2.79
RPUSD1-202ENST00000561734 PPARGC1BQ86YN6 1023 aaKnown RBP32.48■■■□□ 2.79
RPUSD1-202ENST00000561734 BAZ1AQ9NRL2 1556 aaPredicted RBP32.47■■■□□ 2.79
RPUSD1-202ENST00000561734 EIF4G1Q04637 1599 aaKnown RBP32.26■■■□□ 2.76
RPUSD1-202ENST00000561734 EHMT2Q96KQ7 1210 aa32.21■■■□□ 2.75
RPUSD1-202ENST00000561734 UNC13AQ9UPW8 1703 aa32.19■■■□□ 2.74
RPUSD1-202ENST00000561734 SMARCA4P51532 1647 aa32.17■■■□□ 2.74
RPUSD1-202ENST00000561734 TOP2AP11388 1531 aaKnown RBP32.16■■■□□ 2.74
RPUSD1-202ENST00000561734 CCDC88BA6NC98 1476 aa31.99■■■□□ 2.71
RPUSD1-202ENST00000561734 SMARCA2P51531 1590 aa31.98■■■□□ 2.71
RPUSD1-202ENST00000561734 ABCC8Q09428 1581 aa31.91■■■□□ 2.7
RPUSD1-202ENST00000561734 ZEB1P37275 1124 aaPredicted RBP31.84■■■□□ 2.69
RPUSD1-202ENST00000561734 BICRAQ9NZM4 1560 aa31.79■■■□□ 2.68
RPUSD1-202ENST00000561734 PABPN1Q86U42 306 aaKnown RBP eCLIP31.73■■■□□ 2.67
RPUSD1-202ENST00000561734 SOGA1O94964 1423 aa31.6■■■□□ 2.65
RPUSD1-202ENST00000561734 PEG3Q9GZU2 1588 aa31.57■■■□□ 2.64
RPUSD1-202ENST00000561734 CEP162Q5TB80 1403 aa31.46■■■□□ 2.63
RPUSD1-202ENST00000561734 EEA1Q15075 1411 aa31.45■■■□□ 2.63
RPUSD1-202ENST00000561734 WRNQ14191 1432 aaPredicted RBP eCLIP31.44■■■□□ 2.62
RPUSD1-202ENST00000561734 RUSC2Q8N2Y8 1516 aa31.44■■■□□ 2.62
RPUSD1-202ENST00000561734 TNIKQ9UKE5 1360 aa31.41■■■□□ 2.62
RPUSD1-202ENST00000561734 CSRNP3Q8WYN3 585 aa31.38■■■□□ 2.61
RPUSD1-202ENST00000561734 ATAD2BQ9ULI0 1458 aa31.33■■■□□ 2.61
RPUSD1-202ENST00000561734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.24■■■□□ 2.59
RPUSD1-202ENST00000561734 GOLGA3Q08378 1498 aa31.24■■■□□ 2.59
RPUSD1-202ENST00000561734 SYNJ1O43426 1573 aa31.24■■■□□ 2.59
RPUSD1-202ENST00000561734 BAZ1BQ9UIG0 1483 aaKnown RBP31.24■■■□□ 2.59
RPUSD1-202ENST00000561734 UBTFP17480 764 aaKnown RBP31.23■■■□□ 2.59
RPUSD1-202ENST00000561734 TTBK1Q5TCY1 1321 aaPredicted RBP31.19■■■□□ 2.58
RPUSD1-202ENST00000561734 CCER1Q8TC90 406 aaPredicted RBP31.16■■■□□ 2.58
RPUSD1-202ENST00000561734 CEP164Q9UPV0 1460 aa31.07■■■□□ 2.56
RPUSD1-202ENST00000561734 KIF21BO75037 1637 aa31.06■■■□□ 2.56
RPUSD1-202ENST00000561734 TOP2BQ02880 1626 aa30.87■■■□□ 2.53
RPUSD1-202ENST00000561734 CLIP1P30622 1438 aa30.87■■■□□ 2.53
RPUSD1-202ENST00000561734 RAPGEF2Q9Y4G8 1499 aa30.83■■■□□ 2.53
RPUSD1-202ENST00000561734 BIVM-ERCC5R4GMW8 1640 aa30.77■■■□□ 2.52
RPUSD1-202ENST00000561734 VPS8Q8N3P4 1428 aa30.75■■■□□ 2.51
RPUSD1-202ENST00000561734 HMGXB3Q12766 1538 aa30.74■■■□□ 2.51
RPUSD1-202ENST00000561734 NCAPD3P42695 1498 aa30.71■■■□□ 2.51
RPUSD1-202ENST00000561734 RANGAP1P46060 587 aaPredicted RBP30.59■■■□□ 2.49
RPUSD1-202ENST00000561734 CUX1P39880 1505 aa30.56■■■□□ 2.48
RPUSD1-202ENST00000561734 SCAF1Q9H7N4 1312 aaKnown RBP30.56■■■□□ 2.48
RPUSD1-202ENST00000561734 ERICH3Q5RHP9 1530 aa30.56■■■□□ 2.48
RPUSD1-202ENST00000561734 PRXQ9BXM0 1461 aa30.55■■■□□ 2.48
RPUSD1-202ENST00000561734 HNRNPUL2Q1KMD3 747 aaKnown RBP30.54■■■□□ 2.48
RPUSD1-202ENST00000561734 DIEXFQ68CQ4 756 aaKnown RBP30.54■■■□□ 2.48
RPUSD1-202ENST00000561734 APLP2Q06481 763 aa30.53■■■□□ 2.48
RPUSD1-202ENST00000561734 CFTRP13569 1480 aa30.48■■■□□ 2.47
RPUSD1-202ENST00000561734 ARAP1Q96P48 1450 aa30.4■■■□□ 2.46
RPUSD1-202ENST00000561734 KIF27Q86VH2 1401 aa30.39■■■□□ 2.46
RPUSD1-202ENST00000561734 ZNF316A6NFI3 1004 aaPredicted RBP30.34■■■□□ 2.45
RPUSD1-202ENST00000561734 ACIN1Q9UKV3 1341 aaKnown RBP30.29■■■□□ 2.44
RPUSD1-202ENST00000561734 PRDM2Q13029 1718 aa30.26■■■□□ 2.44
RPUSD1-202ENST00000561734 NEUROD1Q13562 356 aa30.24■■■□□ 2.43
RPUSD1-202ENST00000561734 KANK4Q5T7N3 995 aaPredicted RBP30.18■■■□□ 2.42
RPUSD1-202ENST00000561734 ARHGAP35Q9NRY4 1499 aa30.13■■■□□ 2.41
RPUSD1-202ENST00000561734 CADPSQ9ULU8 1353 aa30.11■■■□□ 2.41
RPUSD1-202ENST00000561734 CUX2O14529 1486 aa30.11■■■□□ 2.41
RPUSD1-202ENST00000561734 CENPBP07199 599 aaPredicted RBP30.11■■■□□ 2.41
RPUSD1-202ENST00000561734 IGF1RP08069 1367 aa30.05■■■□□ 2.4
RPUSD1-202ENST00000561734 RRBP1Q9P2E9 1410 aaKnown RBP30.04■■■□□ 2.4
RPUSD1-202ENST00000561734 FGD5Q6ZNL6 1462 aa30.01■■■□□ 2.39
RPUSD1-202ENST00000561734 DHX57Q6P158 1386 aaKnown RBP30.01■■■□□ 2.39
RPUSD1-202ENST00000561734 CLSPNQ9HAW4 1339 aa29.96■■■□□ 2.39
RPUSD1-202ENST00000561734 CC2D2AQ9P2K1 1620 aa29.94■■■□□ 2.38
RPUSD1-202ENST00000561734 CARMIL1Q5VZK9 1371 aa29.92■■■□□ 2.38
RPUSD1-202ENST00000561734 GTF3C3Q9Y5Q9 886 aa29.92■■■□□ 2.38
RPUSD1-202ENST00000561734 CCNB3Q8WWL7 1395 aa29.9■■■□□ 2.38
RPUSD1-202ENST00000561734 MIER1Q8N108 512 aa29.89■■■□□ 2.38
RPUSD1-202ENST00000561734 PELP1Q8IZL8 1130 aaKnown RBP29.85■■■□□ 2.37
RPUSD1-202ENST00000561734 FANCD2Q9BXW9 1451 aa29.84■■■□□ 2.37
RPUSD1-202ENST00000561734 TIAM1Q13009 1591 aa29.82■■■□□ 2.36
RPUSD1-202ENST00000561734 YTHDC1Q96MU7 727 aaKnown RBP29.8■■■□□ 2.36
RPUSD1-202ENST00000561734 MAP3K1Q13233 1512 aa29.79■■■□□ 2.36
RPUSD1-202ENST00000561734 ITGAEP38570 1179 aa29.73■■■□□ 2.35
RPUSD1-202ENST00000561734 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
RPUSD1-202ENST00000561734 LRRC9Q6ZRR7 1453 aa29.69■■■□□ 2.34
RPUSD1-202ENST00000561734 RAD54L2Q9Y4B4 1467 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms