RNA–Protein interactions for RNA: ENST00000624304.3

SMIM11B-205, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 1,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-205ENST00000624304 NISCHQ9Y2I1 1504 aa47.73■■■■■ 5.23
SMIM11B-205ENST00000624304 CCDC180Q9P1Z9 1646 aa41.82■■■■■ 4.29
SMIM11B-205ENST00000624304 ABCC9O60706 1549 aa40.17■■■■■ 4.02
SMIM11B-205ENST00000624304 ZCCHC6Q5VYS8 1495 aaKnown RBP39.96■■■■□ 3.99
SMIM11B-205ENST00000624304 DCAF8L2P0C7V8 631 aa39.72■■■■□ 3.95
SMIM11B-205ENST00000624304 DCAF1Q9Y4B6 1507 aa39.36■■■■□ 3.89
SMIM11B-205ENST00000624304 NACADO15069 1562 aa39.07■■■■□ 3.85
SMIM11B-205ENST00000624304 MYO15BQ96JP2 1530 aa39.07■■■■□ 3.84
SMIM11B-205ENST00000624304 RB1CC1Q8TDY2 1594 aa38.89■■■■□ 3.82
SMIM11B-205ENST00000624304 SHROOM4Q9ULL8 1493 aa38.69■■■■□ 3.78
SMIM11B-205ENST00000624304 SCRIBQ14160 1630 aa38.51■■■■□ 3.75
SMIM11B-205ENST00000624304 UNC13AQ9UPW8 1703 aa38.29■■■■□ 3.72
SMIM11B-205ENST00000624304 BICRAQ9NZM4 1560 aa37.83■■■■□ 3.65
SMIM11B-205ENST00000624304 PABPN1Q86U42 306 aaKnown RBP eCLIP37.82■■■■□ 3.65
SMIM11B-205ENST00000624304 CECR2Q9BXF3 1484 aa37.23■■■■□ 3.55
SMIM11B-205ENST00000624304 SUPT5HO00267 1087 aaKnown RBP36.92■■■■□ 3.5
SMIM11B-205ENST00000624304 MROH2BQ7Z745 1585 aa36.91■■■■□ 3.5
SMIM11B-205ENST00000624304 BAZ1AQ9NRL2 1556 aaPredicted RBP36.85■■■■□ 3.49
SMIM11B-205ENST00000624304 RSF1Q96T23 1441 aaPredicted RBP36.83■■■■□ 3.49
SMIM11B-205ENST00000624304 SMARCA4P51532 1647 aa36.82■■■■□ 3.49
SMIM11B-205ENST00000624304 EIF4G1Q04637 1599 aaKnown RBP36.69■■■■□ 3.46
SMIM11B-205ENST00000624304 WIZO95785 1651 aa36.64■■■■□ 3.46
SMIM11B-205ENST00000624304 PEG3Q9GZU2 1588 aa36.34■■■■□ 3.41
SMIM11B-205ENST00000624304 ATAD2BQ9ULI0 1458 aa36.34■■■■□ 3.41
SMIM11B-205ENST00000624304 CC2D2AQ9P2K1 1620 aa36.33■■■■□ 3.41
SMIM11B-205ENST00000624304 SMARCA2P51531 1590 aa36.24■■■■□ 3.39
SMIM11B-205ENST00000624304 TOP2AP11388 1531 aaKnown RBP36.11■■■■□ 3.37
SMIM11B-205ENST00000624304 BAZ1BQ9UIG0 1483 aaKnown RBP36.08■■■■□ 3.37
SMIM11B-205ENST00000624304 NCAPD3P42695 1498 aa36.08■■■■□ 3.37
SMIM11B-205ENST00000624304 DNAJC5BQ9UF47 199 aa36.03■■■■□ 3.36
SMIM11B-205ENST00000624304 HMGXB3Q12766 1538 aa35.96■■■■□ 3.35
SMIM11B-205ENST00000624304 CCDC88BA6NC98 1476 aa35.8■■■■□ 3.32
SMIM11B-205ENST00000624304 CFTRP13569 1480 aa35.14■■■■□ 3.22
SMIM11B-205ENST00000624304 NESP48681 1621 aa35.14■■■■□ 3.22
SMIM11B-205ENST00000624304 CADPSQ9ULU8 1353 aa35.13■■■■□ 3.21
SMIM11B-205ENST00000624304 CHIC1Q5VXU3 224 aa35.02■■■■□ 3.2
SMIM11B-205ENST00000624304 PRDM2Q13029 1718 aa35■■■■□ 3.19
SMIM11B-205ENST00000624304 LAMC3Q9Y6N6 1575 aa34.94■■■■□ 3.18
SMIM11B-205ENST00000624304 ABCC8Q09428 1581 aa34.93■■■■□ 3.18
SMIM11B-205ENST00000624304 FANCD2Q9BXW9 1451 aa34.77■■■■□ 3.16
SMIM11B-205ENST00000624304 KIF21AQ7Z4S6 1674 aa34.72■■■■□ 3.15
SMIM11B-205ENST00000624304 TRIM41Q8WV44 630 aa34.67■■■■□ 3.14
SMIM11B-205ENST00000624304 PDS5BQ9NTI5 1447 aa34.66■■■■□ 3.14
SMIM11B-205ENST00000624304 WRNQ14191 1432 aaPredicted RBP eCLIP34.66■■■■□ 3.14
SMIM11B-205ENST00000624304 SYNJ1O43426 1573 aa34.61■■■■□ 3.13
SMIM11B-205ENST00000624304 CEP164Q9UPV0 1460 aa34.57■■■■□ 3.12
SMIM11B-205ENST00000624304 CUX1P39880 1505 aa34.54■■■■□ 3.12
SMIM11B-205ENST00000624304 TOP2BQ02880 1626 aa34.46■■■■□ 3.11
SMIM11B-205ENST00000624304 BIVM-ERCC5R4GMW8 1640 aa34.43■■■■□ 3.1
SMIM11B-205ENST00000624304 ERCC6Q03468 1493 aa34.42■■■■□ 3.1
SMIM11B-205ENST00000624304 URB2Q14146 1524 aaKnown RBP34.41■■■■□ 3.1
SMIM11B-205ENST00000624304 TOPBP1Q92547 1522 aa34.34■■■■□ 3.09
SMIM11B-205ENST00000624304 DNMBPQ6XZF7 1577 aa34.33■■■■□ 3.09
SMIM11B-205ENST00000624304 MRC2Q9UBG0 1479 aa34.28■■■■□ 3.08
SMIM11B-205ENST00000624304 FGD5Q6ZNL6 1462 aa34.22■■■■□ 3.07
SMIM11B-205ENST00000624304 THOC2Q8NI27 1593 aaKnown RBP34.21■■■■□ 3.07
SMIM11B-205ENST00000624304 POLA1P09884 1462 aaPredicted RBP34.15■■■■□ 3.06
SMIM11B-205ENST00000624304 FAM9AQ8IZU1 332 aaPredicted RBP34.14■■■■□ 3.06
SMIM11B-205ENST00000624304 SOGA1O94964 1423 aa34.14■■■■□ 3.06
SMIM11B-205ENST00000624304 WDR62O43379 1518 aa34.13■■■■□ 3.05
SMIM11B-205ENST00000624304 RUSC2Q8N2Y8 1516 aa34.1■■■■□ 3.05
SMIM11B-205ENST00000624304 RAD54L2Q9Y4B4 1467 aa34.09■■■■□ 3.05
SMIM11B-205ENST00000624304 CUX2O14529 1486 aa33.96■■■■□ 3.03
SMIM11B-205ENST00000624304 TARBP1Q13395 1621 aaKnown RBP33.9■■■■□ 3.02
SMIM11B-205ENST00000624304 WDR97A6NE52 1622 aa33.87■■■■□ 3.01
SMIM11B-205ENST00000624304 ABCA10Q8WWZ4 1543 aa33.86■■■■□ 3.01
SMIM11B-205ENST00000624304 KIF27Q86VH2 1401 aa33.79■■■■□ 3
SMIM11B-205ENST00000624304 TDRD9Q8NDG6 1382 aaKnown RBP33.78■■■■□ 3
SMIM11B-205ENST00000624304 EHMT2Q96KQ7 1210 aa33.77■■■■□ 3
SMIM11B-205ENST00000624304 LOC105371045A0A1W2PR82 267 aa33.76■■■■□ 3
SMIM11B-205ENST00000624304 CSRNP3Q8WYN3 585 aa33.76■■■□□ 2.99
SMIM11B-205ENST00000624304 IFT140Q96RY7 1462 aa33.75■■■□□ 2.99
SMIM11B-205ENST00000624304 EEA1Q15075 1411 aa33.75■■■□□ 2.99
SMIM11B-205ENST00000624304 ZNF608Q9ULD9 1512 aaPredicted RBP33.72■■■□□ 2.99
SMIM11B-205ENST00000624304 AQRO60306 1485 aaKnown RBP eCLIP33.67■■■□□ 2.98
SMIM11B-205ENST00000624304 ABCA5Q8WWZ7 1642 aa33.67■■■□□ 2.98
SMIM11B-205ENST00000624304 IGF1RP08069 1367 aa33.62■■■□□ 2.97
SMIM11B-205ENST00000624304 GAPVD1Q14C86 1478 aa33.62■■■□□ 2.97
SMIM11B-205ENST00000624304 EIF4G3O43432 1585 aaKnown RBP33.55■■■□□ 2.96
SMIM11B-205ENST00000624304 PBRM1Q86U86 1689 aa33.54■■■□□ 2.96
SMIM11B-205ENST00000624304 PRXQ9BXM0 1461 aa33.46■■■□□ 2.95
SMIM11B-205ENST00000624304 KIF21BO75037 1637 aa33.44■■■□□ 2.94
SMIM11B-205ENST00000624304 ERICH3Q5RHP9 1530 aa33.44■■■□□ 2.94
SMIM11B-205ENST00000624304 RAPGEF2Q9Y4G8 1499 aa33.44■■■□□ 2.94
SMIM11B-205ENST00000624304 CARMIL1Q5VZK9 1371 aa33.42■■■□□ 2.94
SMIM11B-205ENST00000624304 GRIN2BQ13224 1484 aa33.4■■■□□ 2.94
SMIM11B-205ENST00000624304 CUL7Q14999 1698 aa33.35■■■□□ 2.93
SMIM11B-205ENST00000624304 HRCP23327 699 aa33.35■■■□□ 2.93
SMIM11B-205ENST00000624304 GOLGA3Q08378 1498 aa33.34■■■□□ 2.93
SMIM11B-205ENST00000624304 SNAPC4Q5SXM2 1469 aa33.3■■■□□ 2.92
SMIM11B-205ENST00000624304 UBTFP17480 764 aaKnown RBP33.3■■■□□ 2.92
SMIM11B-205ENST00000624304 ADAMTS12P58397 1594 aa33.25■■■□□ 2.91
SMIM11B-205ENST00000624304 FHAD1B1AJZ9 1412 aa33.2■■■□□ 2.91
SMIM11B-205ENST00000624304 MAGI1Q96QZ7 1491 aaPredicted RBP33.16■■■□□ 2.9
SMIM11B-205ENST00000624304 TNIKQ9UKE5 1360 aa33.14■■■□□ 2.9
SMIM11B-205ENST00000624304 FBLN2P98095 1184 aa33.1■■■□□ 2.89
SMIM11B-205ENST00000624304 SYNJ2O15056 1496 aa33.07■■■□□ 2.88
SMIM11B-205ENST00000624304 RANGAP1P46060 587 aaPredicted RBP33.05■■■□□ 2.88
SMIM11B-205ENST00000624304 CHMP7Q8WUX9 453 aaPredicted RBP33.05■■■□□ 2.88
SMIM11B-205ENST00000624304 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms