Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ARAP1-207ENST00000429686 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.532e-6■■■■□ 23.9
MATR3P43243 BRPF3-211ENST00000534400 4254 ntTSL 5 BASIC11.63□□□□□ -0.552e-6■■■■□ 23.9
MATR3P43243 CPVL-203ENST00000409850 2213 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.592e-6■■■■□ 23.9
MATR3P43243 MTMR10-209ENST00000568604 5679 ntTSL 1 (best)11.14□□□□□ -0.632e-6■■■■□ 23.9
MATR3P43243 CTDSPL-207ENST00000447745 793 ntTSL 311.08□□□□□ -0.642e-6■■■■□ 23.9
MATR3P43243 LENG8-204ENST00000436479 320 ntTSL 511.07□□□□□ -0.643e-6■■■■□ 23.9
MATR3P43243 NDRG1-215ENST00000520943 536 ntTSL 411□□□□□ -0.652e-6■■■■□ 23.9
MATR3P43243 RAB3GAP1-201ENST00000264158 4914 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.652e-6■■■■□ 23.9
MATR3P43243 ARFGEF1-203ENST00000518230 2734 ntTSL 510.97□□□□□ -0.652e-6■■■■□ 23.9
MATR3P43243 GPBP1L1-214ENST00000498128 559 ntTSL 310.86□□□□□ -0.672e-6■■■■□ 23.9
MATR3P43243 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC10.6□□□□□ -0.712e-6■■■■□ 23.9
MATR3P43243 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.722e-6■■■■□ 23.9
MATR3P43243 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC10.46□□□□□ -0.742e-6■■■■□ 23.9
MATR3P43243 ARL15-203ENST00000505383 536 ntTSL 39.95□□□□□ -0.822e-6■■■■□ 23.9
MATR3P43243 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC9.86□□□□□ -0.832e-6■■■■□ 23.9
MATR3P43243 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.842e-6■■■■□ 23.9
MATR3P43243 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC9.66□□□□□ -0.863e-8■■■■□ 23.9
MATR3P43243 WASHC3-209ENST00000540536 883 ntTSL 39.53□□□□□ -0.882e-6■■■■□ 23.9
MATR3P43243 NDRG1-227ENST00000523892 562 ntTSL 49.52□□□□□ -0.892e-6■■■■□ 23.9
MATR3P43243 CEP44-202ENST00000396791 3824 ntTSL 1 (best)9.47□□□□□ -0.892e-6■■■■□ 23.9
MATR3P43243 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC9.46□□□□□ -0.93e-8■■■■□ 23.9
MATR3P43243 CEP44-207ENST00000505124 600 ntTSL 49.37□□□□□ -0.912e-6■■■■□ 23.9
MATR3P43243 TLK2-210ENST00000581041 1784 ntTSL 59.27□□□□□ -0.932e-6■■■■□ 23.9
MATR3P43243 TLK2-217ENST00000583843 767 ntTSL 59.25□□□□□ -0.932e-6■■■■□ 23.9
MATR3P43243 LMO7-224ENST00000533305 720 ntTSL 58.87□□□□□ -0.992e-6■■■■□ 23.9
MATR3P43243 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.993e-6■■■■□ 23.9
MATR3P43243 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC8.75□□□□□ -1.013e-8■■■■□ 23.9
MATR3P43243 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.012e-6■■■■□ 23.9
MATR3P43243 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.022e-6■■■■□ 23.9
MATR3P43243 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.032e-6■■■■□ 23.9
MATR3P43243 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.53□□□□□ -1.044e-7■■■■□ 23.9
MATR3P43243 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.052e-6■■■■□ 23.9
MATR3P43243 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.082e-6■■■■□ 23.9
MATR3P43243 AJ009632.2-206ENST00000449602 1000 ntTSL 58.03□□□□□ -1.122e-6■■■■□ 23.9
MATR3P43243 CAPRIN2-208ENST00000537553 6543 ntTSL 28.02□□□□□ -1.132e-12■■■■□ 23.9
MATR3P43243 CDC40-207ENST00000606893 3372 ntTSL 27.87□□□□□ -1.152e-6■■■■□ 23.9
MATR3P43243 CAPRIN2-207ENST00000537108 2187 ntTSL 57.78□□□□□ -1.162e-12■■■■□ 23.9
MATR3P43243 WASHC3-207ENST00000538761 886 ntTSL 37.67□□□□□ -1.182e-6■■■■□ 23.9
MATR3P43243 CEP192-214ENST00000589596 3793 ntAPPRIS ALT2 TSL 27.47□□□□□ -1.211e-6■■■■□ 23.9
MATR3P43243 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.213e-8■■■■□ 23.9
MATR3P43243 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.242e-6■■■■□ 23.9
MATR3P43243 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.27□□□□□ -1.252e-6■■■■□ 23.9
MATR3P43243 RBM41-208ENST00000495517 3315 ntTSL 27.21□□□□□ -1.264e-7■■■■□ 23.9
MATR3P43243 CAPRIN2-216ENST00000548676 3221 ntTSL 1 (best)7.17□□□□□ -1.262e-12■■■■□ 23.9
MATR3P43243 CTDSPL-208ENST00000486978 609 ntTSL 36.99□□□□□ -1.292e-6■■■■□ 23.9
MATR3P43243 TLK2-209ENST00000580705 550 ntTSL 56.98□□□□□ -1.292e-6■■■■□ 23.9
MATR3P43243 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.85□□□□□ -1.312e-12■■■■□ 23.9
MATR3P43243 WASHC3-211ENST00000542923 477 ntTSL 36.7□□□□□ -1.342e-6■■■■□ 23.9
MATR3P43243 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.344e-7■■■■□ 23.9
MATR3P43243 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.69□□□□□ -1.342e-12■■■■□ 23.9
MATR3P43243 WASHC3-205ENST00000536197 879 ntTSL 26.54□□□□□ -1.362e-6■■■■□ 23.9
MATR3P43243 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.26□□□□□ -1.413e-8■■■■□ 23.9
MATR3P43243 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.423e-6■■■■□ 23.9
MATR3P43243 RBM41-206ENST00000475556 346 ntTSL 55.97□□□□□ -1.456e-7■■■■□ 23.9
MATR3P43243 WASHC3-208ENST00000539515 688 ntTSL 35.85□□□□□ -1.472e-6■■■■□ 23.9
MATR3P43243 BRPF3-208ENST00000527657 437 ntTSL 55.58□□□□□ -1.522e-6■■■■□ 23.9
MATR3P43243 IMPAD1-203ENST00000520392 584 ntTSL 25.29□□□□□ -1.562e-6■■■■□ 23.9
MATR3P43243 DCBLD2-206ENST00000470393 4435 ntTSL 1 (best)5.21□□□□□ -1.582e-6■■■■□ 23.9
MATR3P43243 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.582e-6■■■■□ 23.9
MATR3P43243 ARFGEF1-207ENST00000520381 5882 ntTSL 55.17□□□□□ -1.582e-6■■■■□ 23.9
MATR3P43243 PDLIM5-214ENST00000510099 554 ntTSL 45.12□□□□□ -1.592e-6■■■■□ 23.9
MATR3P43243 TULP4-203ENST00000432358 424 ntTSL 35.08□□□□□ -1.62e-6■■■■□ 23.9
MATR3P43243 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.62e-6■■■■□ 23.9
MATR3P43243 RBM41-203ENST00000434854 680 ntTSL 54.76□□□□□ -1.656e-7■■■■□ 23.9
MATR3P43243 RBM41-207ENST00000485676 925 ntTSL 24.74□□□□□ -1.656e-7■■■■□ 23.9
MATR3P43243 CAPRIN2-214ENST00000543380 628 ntTSL 54.07□□□□□ -1.762e-12■■■■□ 23.9
MATR3P43243 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.852e-6■■■■□ 23.9
MATR3P43243 CPVL-210ENST00000455893 561 ntTSL 53.49□□□□□ -1.852e-6■■■■□ 23.9
MATR3P43243 ZNF124-203ENST00000476312 504 ntTSL 22.93□□□□□ -1.942e-6■■■■□ 23.9
MATR3P43243 PSMD14-203ENST00000477232 4890 ntTSL 1 (best)2.21□□□□□ -2.062e-6■■■■□ 23.9
MATR3P43243 CAPRIN2-206ENST00000534897 478 ntTSL 41.71□□□□□ -2.142e-12■■■■□ 23.9
MATR3P43243 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.211e-6■■■■□ 23.8
MATR3P43243 NDUFAF6-206ENST00000518258 1373 ntTSL 226.04■■□□□ 1.763e-6■■■■□ 23.8
MATR3P43243 NDUFAF6-204ENST00000454358 946 ntTSL 524.95■■□□□ 1.583e-6■■■■□ 23.8
MATR3P43243 NDUFAF6-205ENST00000517976 1196 ntTSL 524.88■■□□□ 1.573e-6■■■■□ 23.8
MATR3P43243 NDUFAF6-211ENST00000520757 1474 ntTSL 224■■□□□ 1.433e-6■■■■□ 23.8
MATR3P43243 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.143e-6■■■■□ 23.8
MATR3P43243 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.621e-6■■■■□ 23.8
MATR3P43243 IDH3B-209ENST00000488299 1620 ntTSL 218.86■□□□□ 0.611e-6■■■■□ 23.8
MATR3P43243 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.371e-6■■■■□ 23.8
MATR3P43243 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.351e-6■■■■□ 23.8
MATR3P43243 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.88■□□□□ 0.131e-6■■■■□ 23.8
MATR3P43243 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC14.69□□□□□ -0.063e-6■■■■□ 23.8
MATR3P43243 IDH3B-207ENST00000477689 608 ntTSL 514.65□□□□□ -0.061e-6■■■■□ 23.8
MATR3P43243 NDUFAF6-202ENST00000396113 2549 ntTSL 5 BASIC13.48□□□□□ -0.253e-6■■■■□ 23.8
MATR3P43243 IDH3B-204ENST00000466494 677 ntTSL 211.85□□□□□ -0.511e-6■■■■□ 23.8
MATR3P43243 IDH3B-211ENST00000492240 964 ntTSL 510.48□□□□□ -0.731e-6■■■■□ 23.8
MATR3P43243 NDUFAF6-216ENST00000523184 732 ntTSL 36.64□□□□□ -1.353e-6■■■■□ 23.8
MATR3P43243 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.27■□□□□ 0.198e-8■■■■□ 23.8
MATR3P43243 AGO3-207ENST00000634486 3599 ntTSL 516.1■□□□□ 0.178e-8■■■■□ 23.8
MATR3P43243 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.388e-8■■■■□ 23.8
MATR3P43243 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.472e-6■■■■□ 23.8
MATR3P43243 TRIM44-202ENST00000532066 637 ntTSL 48.53□□□□□ -1.042e-6■■■■□ 23.8
MATR3P43243 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.226e-8■■■■□ 23.8
MATR3P43243 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.28■□□□□ 0.046e-8■■■■□ 23.8
MATR3P43243 AC025165.3-203ENST00000546504 373 ntAPPRIS P1 TSL 215.01□□□□□ -0.016e-8■■■■□ 23.8
MATR3P43243 EEF1AKMT3-202ENST00000333012 2762 ntTSL 1 (best) BASIC13.72□□□□□ -0.216e-8■■■■□ 23.8
MATR3P43243 AC025165.3-202ENST00000553083 332 ntTSL 213.4□□□□□ -0.266e-8■■■■□ 23.8
MATR3P43243 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.94■□□□□ 0.141e-6■■■■□ 23.8
MATR3P43243 SH3BP4-204ENST00000416021 593 ntTSL 323.1■■□□□ 1.299e-7■■■■□ 23.8
Retrieved 100 of 16,209 protein–RNA pairs in 94.8 ms