RNA–Protein interactions for RNA: ENST00000548676.5

CAPRIN2-216, Transcript of caprin family member 2, humanhuman

TSL 1 (best)

Gene CAPRIN2, Length 3,221 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2-216ENST00000548676 NISCHQ9Y2I1 1504 aa11.66□□□□□ -0.54
CAPRIN2-216ENST00000548676 PELP1Q8IZL8 1130 aaKnown RBP11.25□□□□□ -0.61
CAPRIN2-216ENST00000548676 HRCP23327 699 aa11.03□□□□□ -0.64
CAPRIN2-216ENST00000548676 MYT1Q01538 1121 aa10.99□□□□□ -0.65
CAPRIN2-216ENST00000548676 PCGF6Q9BYE7 350 aa10.54□□□□□ -0.72
CAPRIN2-216ENST00000548676 PPARGC1BQ86YN6 1023 aaKnown RBP10.52□□□□□ -0.73
CAPRIN2-216ENST00000548676 DCAF1Q9Y4B6 1507 aa10.51□□□□□ -0.73
CAPRIN2-216ENST00000548676 ZEB1P37275 1124 aaPredicted RBP10.47□□□□□ -0.73
CAPRIN2-216ENST00000548676 SCAF1Q9H7N4 1312 aaKnown RBP10.44□□□□□ -0.74
CAPRIN2-216ENST00000548676 CCDC180Q9P1Z9 1646 aa10.44□□□□□ -0.74
CAPRIN2-216ENST00000548676 TTBK1Q5TCY1 1321 aaPredicted RBP10.43□□□□□ -0.74
CAPRIN2-216ENST00000548676 MYO15BQ96JP2 1530 aa10.42□□□□□ -0.74
CAPRIN2-216ENST00000548676 TRIM26Q12899 539 aaPredicted RBP10.32□□□□□ -0.76
CAPRIN2-216ENST00000548676 CHIC1Q5VXU3 224 aa10.31□□□□□ -0.76
CAPRIN2-216ENST00000548676 SUPT5HO00267 1087 aaKnown RBP10.28□□□□□ -0.76
CAPRIN2-216ENST00000548676 ACIN1Q9UKV3 1341 aaKnown RBP10.23□□□□□ -0.77
CAPRIN2-216ENST00000548676 SHROOM4Q9ULL8 1493 aa10.19□□□□□ -0.78
CAPRIN2-216ENST00000548676 CENPBP07199 599 aaPredicted RBP10.19□□□□□ -0.78
CAPRIN2-216ENST00000548676 GTF3C3Q9Y5Q9 886 aa10.07□□□□□ -0.8
CAPRIN2-216ENST00000548676 NEUROD1Q13562 356 aa10.07□□□□□ -0.8
CAPRIN2-216ENST00000548676 ZCCHC6Q5VYS8 1495 aaKnown RBP10□□□□□ -0.81
CAPRIN2-216ENST00000548676 LOC105371045A0A1W2PR82 267 aa9.93□□□□□ -0.82
CAPRIN2-216ENST00000548676 DIEXFQ68CQ4 756 aaKnown RBP9.9□□□□□ -0.82
CAPRIN2-216ENST00000548676 CLSPNQ9HAW4 1339 aa9.9□□□□□ -0.82
CAPRIN2-216ENST00000548676 BCL11AQ9H165 835 aa9.88□□□□□ -0.83
CAPRIN2-216ENST00000548676 ANP32EQ9BTT0 268 aa9.81□□□□□ -0.84
CAPRIN2-216ENST00000548676 CCER1Q8TC90 406 aaPredicted RBP9.78□□□□□ -0.84
CAPRIN2-216ENST00000548676 TRIM41Q8WV44 630 aa9.76□□□□□ -0.85
CAPRIN2-216ENST00000548676 ERICH6Q7L0X2 663 aa9.73□□□□□ -0.85
CAPRIN2-216ENST00000548676 FAM9AQ8IZU1 332 aaPredicted RBP9.73□□□□□ -0.85
CAPRIN2-216ENST00000548676 ZNF316A6NFI3 1004 aaPredicted RBP9.71□□□□□ -0.86
CAPRIN2-216ENST00000548676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.66□□□□□ -0.86
CAPRIN2-216ENST00000548676 PRKCSHP14314 528 aaPredicted RBP9.64□□□□□ -0.87
CAPRIN2-216ENST00000548676 YTHDC1Q96MU7 727 aaKnown RBP9.62□□□□□ -0.87
CAPRIN2-216ENST00000548676 CSRNP3Q8WYN3 585 aa9.58□□□□□ -0.88
CAPRIN2-216ENST00000548676 TSHZ2Q9NRE2 1034 aa9.58□□□□□ -0.88
CAPRIN2-216ENST00000548676 ABCC9O60706 1549 aa9.58□□□□□ -0.88
CAPRIN2-216ENST00000548676 SUPT16HQ9Y5B9 1047 aaKnown RBP9.58□□□□□ -0.88
CAPRIN2-216ENST00000548676 MIER1Q8N108 512 aa9.54□□□□□ -0.88
CAPRIN2-216ENST00000548676 WRNQ14191 1432 aaPredicted RBP eCLIP9.54□□□□□ -0.88
CAPRIN2-216ENST00000548676 MYT1LQ9UL68 1186 aa9.54□□□□□ -0.88
CAPRIN2-216ENST00000548676 APLP2Q06481 763 aa9.49□□□□□ -0.89
CAPRIN2-216ENST00000548676 RB1CC1Q8TDY2 1594 aa9.48□□□□□ -0.89
CAPRIN2-216ENST00000548676 RSF1Q96T23 1441 aaPredicted RBP9.41□□□□□ -0.9
CAPRIN2-216ENST00000548676 DCAF8L2P0C7V8 631 aa9.36□□□□□ -0.91
CAPRIN2-216ENST00000548676 RBM19Q9Y4C8 960 aaKnown RBP9.35□□□□□ -0.91
CAPRIN2-216ENST00000548676 ERICH6BQ5W0A0 696 aa9.33□□□□□ -0.92
CAPRIN2-216ENST00000548676 FANCIQ9NVI1 1328 aa9.33□□□□□ -0.92
CAPRIN2-216ENST00000548676 NEFLP07196 543 aa9.33□□□□□ -0.92
CAPRIN2-216ENST00000548676 CEP162Q5TB80 1403 aa9.32□□□□□ -0.92
CAPRIN2-216ENST00000548676 TNIKQ9UKE5 1360 aa9.3□□□□□ -0.92
CAPRIN2-216ENST00000548676 EHMT2Q96KQ7 1210 aa9.27□□□□□ -0.92
CAPRIN2-216ENST00000548676 EEA1Q15075 1411 aa9.27□□□□□ -0.93
CAPRIN2-216ENST00000548676 FKBP8Q14318 412 aa9.25□□□□□ -0.93
CAPRIN2-216ENST00000548676 DEKP35659 375 aaKnown RBP9.22□□□□□ -0.93
CAPRIN2-216ENST00000548676 EIF4G1Q04637 1599 aaKnown RBP9.21□□□□□ -0.93
CAPRIN2-216ENST00000548676 MSH5O43196 834 aa9.21□□□□□ -0.93
CAPRIN2-216ENST00000548676 BCANQ96GW7 911 aa9.2□□□□□ -0.94
CAPRIN2-216ENST00000548676 CDK11AQ9UQ88 783 aaPredicted RBP9.18□□□□□ -0.94
CAPRIN2-216ENST00000548676 GOLGA3Q08378 1498 aa9.17□□□□□ -0.94
CAPRIN2-216ENST00000548676 UBE2Q2Q8WVN8 375 aa9.17□□□□□ -0.94
CAPRIN2-216ENST00000548676 HNRNPUL2Q1KMD3 747 aaKnown RBP9.16□□□□□ -0.94
CAPRIN2-216ENST00000548676 ANO8Q9HCE9 1232 aaPredicted RBP9.14□□□□□ -0.95
CAPRIN2-216ENST00000548676 DHX57Q6P158 1386 aaKnown RBP9.14□□□□□ -0.95
CAPRIN2-216ENST00000548676 BAZ1AQ9NRL2 1556 aaPredicted RBP9.12□□□□□ -0.95
CAPRIN2-216ENST00000548676 CCER2I3L3R5 266 aa9.12□□□□□ -0.95
CAPRIN2-216ENST00000548676 SCRIBQ14160 1630 aa9.11□□□□□ -0.95
CAPRIN2-216ENST00000548676 VPS8Q8N3P4 1428 aa9.1□□□□□ -0.95
CAPRIN2-216ENST00000548676 RTL5Q5HYW3 569 aaPredicted RBP9.08□□□□□ -0.96
CAPRIN2-216ENST00000548676 KIF21BO75037 1637 aa9.07□□□□□ -0.96
CAPRIN2-216ENST00000548676 UBTFP17480 764 aaKnown RBP9.07□□□□□ -0.96
CAPRIN2-216ENST00000548676 NOP58Q9Y2X3 529 aaKnown RBP9.07□□□□□ -0.96
CAPRIN2-216ENST00000548676 CUX2O14529 1486 aa9.06□□□□□ -0.96
CAPRIN2-216ENST00000548676 CEP164Q9UPV0 1460 aa9.06□□□□□ -0.96
CAPRIN2-216ENST00000548676 ITGAEP38570 1179 aa9.06□□□□□ -0.96
CAPRIN2-216ENST00000548676 CCDC88BA6NC98 1476 aa9.06□□□□□ -0.96
CAPRIN2-216ENST00000548676 ABCC8Q09428 1581 aa9.05□□□□□ -0.96
CAPRIN2-216ENST00000548676 SALL2Q9Y467 1007 aaPredicted RBP9.05□□□□□ -0.96
CAPRIN2-216ENST00000548676 BAZ1BQ9UIG0 1483 aaKnown RBP9.05□□□□□ -0.96
CAPRIN2-216ENST00000548676 CLIP1P30622 1438 aa9.04□□□□□ -0.96
CAPRIN2-216ENST00000548676 MROH2BQ7Z745 1585 aa9.04□□□□□ -0.96
CAPRIN2-216ENST00000548676 WIZO95785 1651 aa9.03□□□□□ -0.96
CAPRIN2-216ENST00000548676 SOGA1O94964 1423 aa9.02□□□□□ -0.97
CAPRIN2-216ENST00000548676 NACADO15069 1562 aa9.02□□□□□ -0.97
CAPRIN2-216ENST00000548676 PPP4R2Q9NY27 417 aa9.01□□□□□ -0.97
CAPRIN2-216ENST00000548676 ANP32CO43423 234 aa9.01□□□□□ -0.97
CAPRIN2-216ENST00000548676 KCNH8Q96L42 1107 aa9.01□□□□□ -0.97
CAPRIN2-216ENST00000548676 TIMELESSQ9UNS1 1208 aa8.98□□□□□ -0.97
CAPRIN2-216ENST00000548676 TOP2AP11388 1531 aaKnown RBP8.98□□□□□ -0.97
CAPRIN2-216ENST00000548676 ANP32AP39687 249 aaKnown RBP8.97□□□□□ -0.97
CAPRIN2-216ENST00000548676 RRBP1Q9P2E9 1410 aaKnown RBP8.97□□□□□ -0.97
CAPRIN2-216ENST00000548676 USP35Q9P2H5 1018 aa8.97□□□□□ -0.97
CAPRIN2-216ENST00000548676 C11orf95C9JLR9 678 aaPredicted RBP8.97□□□□□ -0.97
CAPRIN2-216ENST00000548676 CECR2Q9BXF3 1484 aa8.96□□□□□ -0.97
CAPRIN2-216ENST00000548676 PPP1R15AO75807 674 aaPredicted RBP8.96□□□□□ -0.98
CAPRIN2-216ENST00000548676 NBR1Q14596 966 aa8.96□□□□□ -0.98
CAPRIN2-216ENST00000548676 TRIM52Q96A61 297 aa8.95□□□□□ -0.98
CAPRIN2-216ENST00000548676 DDX10Q13206 875 aaKnown RBP8.94□□□□□ -0.98
CAPRIN2-216ENST00000548676 AEBP2Q6ZN18 517 aaPredicted RBP8.93□□□□□ -0.98
CAPRIN2-216ENST00000548676 CCDC136Q96JN2 1154 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms