RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 DCAF8L2P0C7V8 631 aa12.41□□□□□ -0.42
LMO7-202ENST00000341547 PELP1Q8IZL8 1130 aaKnown RBP12.09□□□□□ -0.47
LMO7-202ENST00000341547 MYT1Q01538 1121 aa12.03□□□□□ -0.48
LMO7-202ENST00000341547 SUPT5HO00267 1087 aaKnown RBP11.99□□□□□ -0.49
LMO7-202ENST00000341547 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
LMO7-202ENST00000341547 NISCHQ9Y2I1 1504 aa11.75□□□□□ -0.53
LMO7-202ENST00000341547 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
LMO7-202ENST00000341547 SHROOM4Q9ULL8 1493 aa11.64□□□□□ -0.55
LMO7-202ENST00000341547 CENPBP07199 599 aaPredicted RBP11.62□□□□□ -0.55
LMO7-202ENST00000341547 ZEB1P37275 1124 aaPredicted RBP11.6□□□□□ -0.55
LMO7-202ENST00000341547 PCGF6Q9BYE7 350 aa11.6□□□□□ -0.55
LMO7-202ENST00000341547 TTBK1Q5TCY1 1321 aaPredicted RBP11.54□□□□□ -0.56
LMO7-202ENST00000341547 CCER1Q8TC90 406 aaPredicted RBP11.46□□□□□ -0.57
LMO7-202ENST00000341547 APLP2Q06481 763 aa11.44□□□□□ -0.58
LMO7-202ENST00000341547 FAM9AQ8IZU1 332 aaPredicted RBP11.39□□□□□ -0.59
LMO7-202ENST00000341547 HRCP23327 699 aa11.37□□□□□ -0.59
LMO7-202ENST00000341547 YTHDC1Q96MU7 727 aaKnown RBP11.36□□□□□ -0.59
LMO7-202ENST00000341547 NEFLP07196 543 aa11.25□□□□□ -0.61
LMO7-202ENST00000341547 RANGAP1P46060 587 aaPredicted RBP11.21□□□□□ -0.61
LMO7-202ENST00000341547 TRIM26Q12899 539 aaPredicted RBP11.13□□□□□ -0.63
LMO7-202ENST00000341547 ATP1B4Q9UN42 357 aaPredicted RBP11.08□□□□□ -0.64
LMO7-202ENST00000341547 PPARGC1BQ86YN6 1023 aaKnown RBP11.06□□□□□ -0.64
LMO7-202ENST00000341547 DAXXQ9UER7 740 aaPredicted RBP11.02□□□□□ -0.64
LMO7-202ENST00000341547 TRIM41Q8WV44 630 aa10.98□□□□□ -0.65
LMO7-202ENST00000341547 UBTFP17480 764 aaKnown RBP10.94□□□□□ -0.66
LMO7-202ENST00000341547 CNGB1Q14028 1251 aaPredicted RBP10.87□□□□□ -0.67
LMO7-202ENST00000341547 POLR3GLQ9BT43 218 aa10.86□□□□□ -0.67
LMO7-202ENST00000341547 RTL5Q5HYW3 569 aaPredicted RBP10.83□□□□□ -0.68
LMO7-202ENST00000341547 DIEXFQ68CQ4 756 aaKnown RBP10.82□□□□□ -0.68
LMO7-202ENST00000341547 GTF3C3Q9Y5Q9 886 aa10.82□□□□□ -0.68
LMO7-202ENST00000341547 ITGAEP38570 1179 aa10.78□□□□□ -0.68
LMO7-202ENST00000341547 ZNF316A6NFI3 1004 aaPredicted RBP10.76□□□□□ -0.69
LMO7-202ENST00000341547 ACIN1Q9UKV3 1341 aaKnown RBP10.75□□□□□ -0.69
LMO7-202ENST00000341547 CHIC1Q5VXU3 224 aa10.75□□□□□ -0.69
LMO7-202ENST00000341547 LOC105371045A0A1W2PR82 267 aa10.71□□□□□ -0.7
LMO7-202ENST00000341547 CLSPNQ9HAW4 1339 aa10.7□□□□□ -0.7
LMO7-202ENST00000341547 HNRNPUL2Q1KMD3 747 aaKnown RBP10.69□□□□□ -0.7
LMO7-202ENST00000341547 BCANQ96GW7 911 aa10.69□□□□□ -0.7
LMO7-202ENST00000341547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.65□□□□□ -0.7
LMO7-202ENST00000341547 SLC4A1APQ9BWU0 796 aaKnown RBP10.58□□□□□ -0.72
LMO7-202ENST00000341547 EIF5BO60841 1220 aaKnown RBP10.56□□□□□ -0.72
LMO7-202ENST00000341547 MYT1LQ9UL68 1186 aa10.56□□□□□ -0.72
LMO7-202ENST00000341547 CDK11AQ9UQ88 783 aaPredicted RBP10.55□□□□□ -0.72
LMO7-202ENST00000341547 SCAF1Q9H7N4 1312 aaKnown RBP10.53□□□□□ -0.72
LMO7-202ENST00000341547 DCAF1Q9Y4B6 1507 aa10.5□□□□□ -0.73
LMO7-202ENST00000341547 BCL11AQ9H165 835 aa10.47□□□□□ -0.73
LMO7-202ENST00000341547 NEUROD1Q13562 356 aa10.44□□□□□ -0.74
LMO7-202ENST00000341547 NPM2Q86SE8 214 aaKnown RBP10.4□□□□□ -0.74
LMO7-202ENST00000341547 GLIPR1L2Q4G1C9 344 aa10.4□□□□□ -0.74
LMO7-202ENST00000341547 ANP32CO43423 234 aa10.39□□□□□ -0.75
LMO7-202ENST00000341547 ANP32AP39687 249 aaKnown RBP10.38□□□□□ -0.75
LMO7-202ENST00000341547 FAM50AQ14320 339 aaKnown RBP10.37□□□□□ -0.75
LMO7-202ENST00000341547 ANP32EQ9BTT0 268 aa10.34□□□□□ -0.75
LMO7-202ENST00000341547 ZBTB47Q9UFB7 747 aaPredicted RBP10.33□□□□□ -0.76
LMO7-202ENST00000341547 NBR1Q14596 966 aa10.33□□□□□ -0.76
LMO7-202ENST00000341547 TRIM52Q96A61 297 aa10.31□□□□□ -0.76
LMO7-202ENST00000341547 CANXP27824 592 aaKnown RBP10.29□□□□□ -0.76
LMO7-202ENST00000341547 FKBP8Q14318 412 aa10.29□□□□□ -0.76
LMO7-202ENST00000341547 ZNF326Q5BKZ1 582 aaKnown RBP10.28□□□□□ -0.76
LMO7-202ENST00000341547 ARXQ96QS3 562 aa10.27□□□□□ -0.77
LMO7-202ENST00000341547 SLC24A1O60721 1099 aa10.27□□□□□ -0.77
LMO7-202ENST00000341547 CCDC180Q9P1Z9 1646 aa10.27□□□□□ -0.77
LMO7-202ENST00000341547 ANP32BQ92688 251 aaKnown RBP10.25□□□□□ -0.77
LMO7-202ENST00000341547 HSP90AA1P07900 732 aaKnown RBP10.2□□□□□ -0.78
LMO7-202ENST00000341547 SALL2Q9Y467 1007 aaPredicted RBP10.13□□□□□ -0.79
LMO7-202ENST00000341547 HNRNPUQ00839 825 aaKnown RBP eCLIP10.12□□□□□ -0.79
LMO7-202ENST00000341547 MIER1Q8N108 512 aa10.12□□□□□ -0.79
LMO7-202ENST00000341547 UPF2Q9HAU5 1272 aaKnown RBP10.1□□□□□ -0.79
LMO7-202ENST00000341547 FAM9BQ8IZU0 186 aa10.1□□□□□ -0.79
LMO7-202ENST00000341547 IRX6P78412 446 aaPredicted RBP10.09□□□□□ -0.79
LMO7-202ENST00000341547 CCDC136Q96JN2 1154 aa10.07□□□□□ -0.8
LMO7-202ENST00000341547 NEFMP07197 916 aa10.07□□□□□ -0.8
LMO7-202ENST00000341547 DDX10Q13206 875 aaKnown RBP10.07□□□□□ -0.8
LMO7-202ENST00000341547 MYO15BQ96JP2 1530 aa10.06□□□□□ -0.8
LMO7-202ENST00000341547 RTN4Q9NQC3 1192 aaKnown RBP10.04□□□□□ -0.8
LMO7-202ENST00000341547 DDRGK1Q96HY6 314 aa10.03□□□□□ -0.8
LMO7-202ENST00000341547 SUPT16HQ9Y5B9 1047 aaKnown RBP10.02□□□□□ -0.81
LMO7-202ENST00000341547 TRIM44Q96DX7 344 aaPredicted RBP9.98□□□□□ -0.81
LMO7-202ENST00000341547 PPM1GO15355 546 aaPredicted RBP9.97□□□□□ -0.81
LMO7-202ENST00000341547 P3H3Q8IVL6 736 aa9.96□□□□□ -0.81
LMO7-202ENST00000341547 NOP58Q9Y2X3 529 aaKnown RBP9.96□□□□□ -0.82
LMO7-202ENST00000341547 ARID3CA6NKF2 412 aa9.96□□□□□ -0.82
LMO7-202ENST00000341547 TONSLQ96HA7 1378 aa9.96□□□□□ -0.82
LMO7-202ENST00000341547 ERICH6BQ5W0A0 696 aa9.95□□□□□ -0.82
LMO7-202ENST00000341547 TMC1Q8TDI8 760 aa9.95□□□□□ -0.82
LMO7-202ENST00000341547 CSRNP3Q8WYN3 585 aa9.95□□□□□ -0.82
LMO7-202ENST00000341547 TNNT2P45379 298 aaPredicted RBP9.94□□□□□ -0.82
LMO7-202ENST00000341547 DEKP35659 375 aaKnown RBP9.94□□□□□ -0.82
LMO7-202ENST00000341547 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.93□□□□□ -0.82
LMO7-202ENST00000341547 HIRIP3Q9BW71 556 aaPredicted RBP9.93□□□□□ -0.82
LMO7-202ENST00000341547 NAP1L5Q96NT1 182 aaPredicted RBP9.92□□□□□ -0.82
LMO7-202ENST00000341547 DNTTIP2Q5QJE6 756 aaKnown RBP9.9□□□□□ -0.83
LMO7-202ENST00000341547 PPP4R2Q9NY27 417 aa9.89□□□□□ -0.83
LMO7-202ENST00000341547 SENP3-EIF4A1A0A087X0R7 540 aa9.89□□□□□ -0.83
LMO7-202ENST00000341547 BECN1Q14457 450 aa9.88□□□□□ -0.83
LMO7-202ENST00000341547 TPRNQ4KMQ1 711 aa9.88□□□□□ -0.83
LMO7-202ENST00000341547 MRS2Q9HD23 443 aa9.88□□□□□ -0.83
LMO7-202ENST00000341547 AMER1Q5JTC6 1135 aaPredicted RBP9.88□□□□□ -0.83
LMO7-202ENST00000341547 ZNF777Q9ULD5 760 aaPredicted RBP9.88□□□□□ -0.83
LMO7-202ENST00000341547 RBM19Q9Y4C8 960 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms