RNA–Protein interactions for RNA: ENST00000264158.12

RAB3GAP1-201, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-201ENST00000264158 DCAF8L2P0C7V8 631 aa17.39■□□□□ 0.37
RAB3GAP1-201ENST00000264158 NISCHQ9Y2I1 1504 aa16.28■□□□□ 0.2
RAB3GAP1-201ENST00000264158 FAM9AQ8IZU1 332 aaPredicted RBP15.48■□□□□ 0.07
RAB3GAP1-201ENST00000264158 SUPT5HO00267 1087 aaKnown RBP15.4■□□□□ 0.06
RAB3GAP1-201ENST00000264158 SHROOM4Q9ULL8 1493 aa15.23■□□□□ 0.03
RAB3GAP1-201ENST00000264158 EHMT2Q96KQ7 1210 aa15□□□□□ -0.01
RAB3GAP1-201ENST00000264158 APLP2Q06481 763 aa14.81□□□□□ -0.04
RAB3GAP1-201ENST00000264158 ATP1B4Q9UN42 357 aaPredicted RBP14.77□□□□□ -0.05
RAB3GAP1-201ENST00000264158 MYT1LQ9UL68 1186 aa14.75□□□□□ -0.05
RAB3GAP1-201ENST00000264158 RANGAP1P46060 587 aaPredicted RBP14.7□□□□□ -0.06
RAB3GAP1-201ENST00000264158 TTBK1Q5TCY1 1321 aaPredicted RBP14.69□□□□□ -0.06
RAB3GAP1-201ENST00000264158 PCGF6Q9BYE7 350 aa14.69□□□□□ -0.06
RAB3GAP1-201ENST00000264158 ABCC9O60706 1549 aa14.65□□□□□ -0.06
RAB3GAP1-201ENST00000264158 PABPN1Q86U42 306 aaKnown RBP eCLIP14.62□□□□□ -0.07
RAB3GAP1-201ENST00000264158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
RAB3GAP1-201ENST00000264158 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
RAB3GAP1-201ENST00000264158 FBLN2P98095 1184 aa14.39□□□□□ -0.11
RAB3GAP1-201ENST00000264158 CHIC1Q5VXU3 224 aa14.34□□□□□ -0.11
RAB3GAP1-201ENST00000264158 UBTFP17480 764 aaKnown RBP14.25□□□□□ -0.13
RAB3GAP1-201ENST00000264158 HRCP23327 699 aa14.25□□□□□ -0.13
RAB3GAP1-201ENST00000264158 ZEB1P37275 1124 aaPredicted RBP14.23□□□□□ -0.13
RAB3GAP1-201ENST00000264158 TRIM41Q8WV44 630 aa14.22□□□□□ -0.13
RAB3GAP1-201ENST00000264158 CCER1Q8TC90 406 aaPredicted RBP14.11□□□□□ -0.15
RAB3GAP1-201ENST00000264158 PELP1Q8IZL8 1130 aaKnown RBP14.09□□□□□ -0.15
RAB3GAP1-201ENST00000264158 TRIM26Q12899 539 aaPredicted RBP14.07□□□□□ -0.16
RAB3GAP1-201ENST00000264158 LOC105371045A0A1W2PR82 267 aa14.07□□□□□ -0.16
RAB3GAP1-201ENST00000264158 CENPBP07199 599 aaPredicted RBP14.07□□□□□ -0.16
RAB3GAP1-201ENST00000264158 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
RAB3GAP1-201ENST00000264158 PPARGC1BQ86YN6 1023 aaKnown RBP14.03□□□□□ -0.16
RAB3GAP1-201ENST00000264158 PLPPR3Q6T4P5 718 aa14.03□□□□□ -0.16
RAB3GAP1-201ENST00000264158 ESF1Q9H501 851 aaKnown RBP13.98□□□□□ -0.17
RAB3GAP1-201ENST00000264158 BCANQ96GW7 911 aa13.91□□□□□ -0.18
RAB3GAP1-201ENST00000264158 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
RAB3GAP1-201ENST00000264158 YTHDC1Q96MU7 727 aaKnown RBP13.85□□□□□ -0.19
RAB3GAP1-201ENST00000264158 SLC4A1APQ9BWU0 796 aaKnown RBP13.79□□□□□ -0.2
RAB3GAP1-201ENST00000264158 CCDC180Q9P1Z9 1646 aa13.77□□□□□ -0.2
RAB3GAP1-201ENST00000264158 AEBP2Q6ZN18 517 aaPredicted RBP13.73□□□□□ -0.21
RAB3GAP1-201ENST00000264158 ITGAEP38570 1179 aa13.72□□□□□ -0.21
RAB3GAP1-201ENST00000264158 ARID3CA6NKF2 412 aa13.67□□□□□ -0.22
RAB3GAP1-201ENST00000264158 MYT1Q01538 1121 aa13.64□□□□□ -0.23
RAB3GAP1-201ENST00000264158 POLR3GLQ9BT43 218 aa13.62□□□□□ -0.23
RAB3GAP1-201ENST00000264158 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
RAB3GAP1-201ENST00000264158 STAG3Q9UJ98 1225 aa13.61□□□□□ -0.23
RAB3GAP1-201ENST00000264158 DIEXFQ68CQ4 756 aaKnown RBP13.56□□□□□ -0.24
RAB3GAP1-201ENST00000264158 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
RAB3GAP1-201ENST00000264158 ARID4BQ4LE39 1312 aaPredicted RBP13.55□□□□□ -0.24
RAB3GAP1-201ENST00000264158 ERICH6Q7L0X2 663 aa13.54□□□□□ -0.24
RAB3GAP1-201ENST00000264158 ZCCHC6Q5VYS8 1495 aaKnown RBP13.53□□□□□ -0.24
RAB3GAP1-201ENST00000264158 NEFLP07196 543 aa13.51□□□□□ -0.25
RAB3GAP1-201ENST00000264158 ZNF777Q9ULD5 760 aaPredicted RBP13.49□□□□□ -0.25
RAB3GAP1-201ENST00000264158 CDK11AQ9UQ88 783 aaPredicted RBP13.46□□□□□ -0.25
RAB3GAP1-201ENST00000264158 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
RAB3GAP1-201ENST00000264158 TRIM52Q96A61 297 aa13.42□□□□□ -0.26
RAB3GAP1-201ENST00000264158 GTF3C3Q9Y5Q9 886 aa13.42□□□□□ -0.26
RAB3GAP1-201ENST00000264158 SCAF1Q9H7N4 1312 aaKnown RBP13.41□□□□□ -0.26
RAB3GAP1-201ENST00000264158 CHGAP10645 457 aaKnown RBP13.41□□□□□ -0.26
RAB3GAP1-201ENST00000264158 SLC24A1O60721 1099 aa13.41□□□□□ -0.26
RAB3GAP1-201ENST00000264158 FAM50AQ14320 339 aaKnown RBP13.4□□□□□ -0.26
RAB3GAP1-201ENST00000264158 SCRIBQ14160 1630 aa13.4□□□□□ -0.26
RAB3GAP1-201ENST00000264158 C14orf37Q86TY3 774 aa13.38□□□□□ -0.27
RAB3GAP1-201ENST00000264158 CNGB1Q14028 1251 aaPredicted RBP13.38□□□□□ -0.27
RAB3GAP1-201ENST00000264158 DCAF1Q9Y4B6 1507 aa13.37□□□□□ -0.27
RAB3GAP1-201ENST00000264158 A0A0G2JS52 829 aa13.36□□□□□ -0.27
RAB3GAP1-201ENST00000264158 MYO15BQ96JP2 1530 aa13.35□□□□□ -0.27
RAB3GAP1-201ENST00000264158 KCNH8Q96L42 1107 aa13.34□□□□□ -0.27
RAB3GAP1-201ENST00000264158 ACIN1Q9UKV3 1341 aaKnown RBP13.31□□□□□ -0.28
RAB3GAP1-201ENST00000264158 SENP3Q9H4L4 574 aaPredicted RBP13.3□□□□□ -0.28
RAB3GAP1-201ENST00000264158 HAP1P54257 671 aaPredicted RBP13.28□□□□□ -0.28
RAB3GAP1-201ENST00000264158 ZNF316A6NFI3 1004 aaPredicted RBP13.26□□□□□ -0.29
RAB3GAP1-201ENST00000264158 RB1CC1Q8TDY2 1594 aa13.25□□□□□ -0.29
RAB3GAP1-201ENST00000264158 ZNF326Q5BKZ1 582 aaKnown RBP13.24□□□□□ -0.29
RAB3GAP1-201ENST00000264158 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
RAB3GAP1-201ENST00000264158 PPP1R15AO75807 674 aaPredicted RBP13.2□□□□□ -0.3
RAB3GAP1-201ENST00000264158 NACADO15069 1562 aa13.19□□□□□ -0.3
RAB3GAP1-201ENST00000264158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.313e-6■□□□□ 8.6
RAB3GAP1-201ENST00000264158 MLECQ14165 292 aa13.13□□□□□ -0.31
RAB3GAP1-201ENST00000264158 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
RAB3GAP1-201ENST00000264158 NEUROD1Q13562 356 aa13.12□□□□□ -0.31
RAB3GAP1-201ENST00000264158 NEFMP07197 916 aa13.11□□□□□ -0.31
RAB3GAP1-201ENST00000264158 CYB5RLQ6IPT4 315 aa13.09□□□□□ -0.31
RAB3GAP1-201ENST00000264158 ZBTB7CA1YPR0 619 aa13.08□□□□□ -0.32
RAB3GAP1-201ENST00000264158 TSPY4P0CV99 314 aa13.07□□□□□ -0.32
RAB3GAP1-201ENST00000264158 TSPY10P0CW01 314 aa13.07□□□□□ -0.32
RAB3GAP1-201ENST00000264158 NPM2Q86SE8 214 aaKnown RBP13.07□□□□□ -0.32
RAB3GAP1-201ENST00000264158 PLEKHD1A6NEE1 506 aa13.07□□□□□ -0.32
RAB3GAP1-201ENST00000264158 OSCARQ8IYS5 282 aa13.02□□□□□ -0.32
RAB3GAP1-201ENST00000264158 LMOD2Q6P5Q4 547 aa13.01□□□□□ -0.33
RAB3GAP1-201ENST00000264158 ANP32CO43423 234 aa12.96□□□□□ -0.33
RAB3GAP1-201ENST00000264158 CECR2Q9BXF3 1484 aa12.95□□□□□ -0.34
RAB3GAP1-201ENST00000264158 RSF1Q96T23 1441 aaPredicted RBP12.93□□□□□ -0.34
RAB3GAP1-201ENST00000264158 PHF23Q9BUL5 403 aaPredicted RBP12.92□□□□□ -0.34
RAB3GAP1-201ENST00000264158 MIER1Q8N108 512 aa12.91□□□□□ -0.34
RAB3GAP1-201ENST00000264158 BAZ1BQ9UIG0 1483 aaKnown RBP12.9□□□□□ -0.34
RAB3GAP1-201ENST00000264158 DAXXQ9UER7 740 aaPredicted RBP12.9□□□□□ -0.34
RAB3GAP1-201ENST00000264158 PDS5BQ9NTI5 1447 aa12.87□□□□□ -0.35
RAB3GAP1-201ENST00000264158 ZBTB47Q9UFB7 747 aaPredicted RBP12.86□□□□□ -0.35
RAB3GAP1-201ENST00000264158 BCL11AQ9H165 835 aa12.84□□□□□ -0.35
RAB3GAP1-201ENST00000264158 RTL5Q5HYW3 569 aaPredicted RBP12.84□□□□□ -0.35
RAB3GAP1-201ENST00000264158 CHIC2Q9UKJ5 165 aa12.84□□□□□ -0.35
RAB3GAP1-201ENST00000264158 FKBP8Q14318 412 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms