RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 NISCHQ9Y2I1 1504 aa14.8□□□□□ -0.04
CDC40-207ENST00000606893 DCAF8L2P0C7V8 631 aa13.44□□□□□ -0.26
CDC40-207ENST00000606893 ABCC9O60706 1549 aa13.01□□□□□ -0.33
CDC40-207ENST00000606893 SHROOM4Q9ULL8 1493 aa12.83□□□□□ -0.36
CDC40-207ENST00000606893 CCDC180Q9P1Z9 1646 aa12.62□□□□□ -0.39
CDC40-207ENST00000606893 PABPN1Q86U42 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDC40-207ENST00000606893 ZCCHC6Q5VYS8 1495 aaKnown RBP12.29□□□□□ -0.44
CDC40-207ENST00000606893 SUPT5HO00267 1087 aaKnown RBP12.28□□□□□ -0.44
CDC40-207ENST00000606893 SCRIBQ14160 1630 aa12.21□□□□□ -0.45
CDC40-207ENST00000606893 RB1CC1Q8TDY2 1594 aa12.06□□□□□ -0.48
CDC40-207ENST00000606893 NACADO15069 1562 aa12□□□□□ -0.49
CDC40-207ENST00000606893 DCAF1Q9Y4B6 1507 aa11.92□□□□□ -0.5
CDC40-207ENST00000606893 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
CDC40-207ENST00000606893 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
CDC40-207ENST00000606893 CECR2Q9BXF3 1484 aa11.82□□□□□ -0.52
CDC40-207ENST00000606893 MYO15BQ96JP2 1530 aa11.8□□□□□ -0.52
CDC40-207ENST00000606893 UNC13AQ9UPW8 1703 aa11.74□□□□□ -0.53
CDC40-207ENST00000606893 BICRAQ9NZM4 1560 aa11.7□□□□□ -0.54
CDC40-207ENST00000606893 MROH2BQ7Z745 1585 aa11.6□□□□□ -0.55
CDC40-207ENST00000606893 RSF1Q96T23 1441 aaPredicted RBP11.56□□□□□ -0.56
CDC40-207ENST00000606893 PCGF6Q9BYE7 350 aa11.54□□□□□ -0.56
CDC40-207ENST00000606893 FAM9AQ8IZU1 332 aaPredicted RBP11.5□□□□□ -0.57
CDC40-207ENST00000606893 WIZO95785 1651 aa11.49□□□□□ -0.57
CDC40-207ENST00000606893 EIF4G1Q04637 1599 aaKnown RBP11.47□□□□□ -0.57
CDC40-207ENST00000606893 PPARGC1BQ86YN6 1023 aaKnown RBP11.45□□□□□ -0.58
CDC40-207ENST00000606893 LOC105371045A0A1W2PR82 267 aa11.45□□□□□ -0.58
CDC40-207ENST00000606893 CC2D2AQ9P2K1 1620 aa11.42□□□□□ -0.58
CDC40-207ENST00000606893 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
CDC40-207ENST00000606893 TTBK1Q5TCY1 1321 aaPredicted RBP11.4□□□□□ -0.58
CDC40-207ENST00000606893 BAZ1BQ9UIG0 1483 aaKnown RBP11.39□□□□□ -0.59
CDC40-207ENST00000606893 SMARCA4P51532 1647 aa11.39□□□□□ -0.59
CDC40-207ENST00000606893 ATAD2BQ9ULI0 1458 aa11.38□□□□□ -0.59
CDC40-207ENST00000606893 RANGAP1P46060 587 aaPredicted RBP11.33□□□□□ -0.6
CDC40-207ENST00000606893 TRIM41Q8WV44 630 aa11.3□□□□□ -0.6
CDC40-207ENST00000606893 NESP48681 1621 aa11.28□□□□□ -0.6
CDC40-207ENST00000606893 CHIC1Q5VXU3 224 aa11.28□□□□□ -0.6
CDC40-207ENST00000606893 CCDC88BA6NC98 1476 aa11.26□□□□□ -0.61
CDC40-207ENST00000606893 PELP1Q8IZL8 1130 aaKnown RBP11.25□□□□□ -0.61
CDC40-207ENST00000606893 SMARCA2P51531 1590 aa11.21□□□□□ -0.61
CDC40-207ENST00000606893 NCAPD3P42695 1498 aa11.18□□□□□ -0.62
CDC40-207ENST00000606893 ERCC6Q03468 1493 aa11.15□□□□□ -0.63
CDC40-207ENST00000606893 FBLN2P98095 1184 aa11.14□□□□□ -0.63
CDC40-207ENST00000606893 TOP2AP11388 1531 aaKnown RBP11.14□□□□□ -0.63
CDC40-207ENST00000606893 ABCC8Q09428 1581 aa11.12□□□□□ -0.63
CDC40-207ENST00000606893 CADPSQ9ULU8 1353 aa11.09□□□□□ -0.63
CDC40-207ENST00000606893 HRCP23327 699 aa11.06□□□□□ -0.64
CDC40-207ENST00000606893 HMGXB3Q12766 1538 aa11□□□□□ -0.65
CDC40-207ENST00000606893 UBTFP17480 764 aaKnown RBP11□□□□□ -0.65
CDC40-207ENST00000606893 FANCD2Q9BXW9 1451 aa11□□□□□ -0.65
CDC40-207ENST00000606893 TDRD9Q8NDG6 1382 aaKnown RBP10.97□□□□□ -0.65
CDC40-207ENST00000606893 PEG3Q9GZU2 1588 aa10.97□□□□□ -0.65
CDC40-207ENST00000606893 WRNQ14191 1432 aaPredicted RBP eCLIP10.95□□□□□ -0.66
CDC40-207ENST00000606893 PDS5BQ9NTI5 1447 aa10.95□□□□□ -0.66
CDC40-207ENST00000606893 ATP1B4Q9UN42 357 aaPredicted RBP10.93□□□□□ -0.66
CDC40-207ENST00000606893 CFTRP13569 1480 aa10.92□□□□□ -0.66
CDC40-207ENST00000606893 P3H3Q8IVL6 736 aa10.92□□□□□ -0.66
CDC40-207ENST00000606893 RAD54L2Q9Y4B4 1467 aa10.92□□□□□ -0.66
CDC40-207ENST00000606893 CEP164Q9UPV0 1460 aa10.91□□□□□ -0.66
CDC40-207ENST00000606893 SOGA1O94964 1423 aa10.91□□□□□ -0.66
CDC40-207ENST00000606893 ARID3CA6NKF2 412 aa10.91□□□□□ -0.66
CDC40-207ENST00000606893 RUSC2Q8N2Y8 1516 aa10.9□□□□□ -0.66
CDC40-207ENST00000606893 MYT1Q01538 1121 aa10.9□□□□□ -0.67
CDC40-207ENST00000606893 AQRO60306 1485 aaKnown RBP eCLIP10.85□□□□□ -0.67
CDC40-207ENST00000606893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.84□□□□□ -0.67
CDC40-207ENST00000606893 KIF21AQ7Z4S6 1674 aa10.83□□□□□ -0.68
CDC40-207ENST00000606893 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
CDC40-207ENST00000606893 CUX2O14529 1486 aa10.82□□□□□ -0.68
CDC40-207ENST00000606893 CHMP7Q8WUX9 453 aaPredicted RBP10.82□□□□□ -0.68
CDC40-207ENST00000606893 URB2Q14146 1524 aaKnown RBP10.81□□□□□ -0.68
CDC40-207ENST00000606893 SYNJ1O43426 1573 aa10.81□□□□□ -0.68
CDC40-207ENST00000606893 FGD5Q6ZNL6 1462 aa10.81□□□□□ -0.68
CDC40-207ENST00000606893 CUX1P39880 1505 aa10.81□□□□□ -0.68
CDC40-207ENST00000606893 SCAF1Q9H7N4 1312 aaKnown RBP10.8□□□□□ -0.68
CDC40-207ENST00000606893 ZNF608Q9ULD9 1512 aaPredicted RBP10.78□□□□□ -0.68
CDC40-207ENST00000606893 LAMC3Q9Y6N6 1575 aa10.78□□□□□ -0.68
CDC40-207ENST00000606893 TOPBP1Q92547 1522 aa10.77□□□□□ -0.68
CDC40-207ENST00000606893 TRIM26Q12899 539 aaPredicted RBP10.76□□□□□ -0.69
CDC40-207ENST00000606893 MRC2Q9UBG0 1479 aa10.75□□□□□ -0.69
CDC40-207ENST00000606893 POLA1P09884 1462 aaPredicted RBP10.74□□□□□ -0.69
CDC40-207ENST00000606893 YTHDC1Q96MU7 727 aaKnown RBP10.74□□□□□ -0.69
CDC40-207ENST00000606893 CCER1Q8TC90 406 aaPredicted RBP10.73□□□□□ -0.69
CDC40-207ENST00000606893 HNRNPUL2Q1KMD3 747 aaKnown RBP10.72□□□□□ -0.69
CDC40-207ENST00000606893 KIF27Q86VH2 1401 aa10.67□□□□□ -0.7
CDC40-207ENST00000606893 CARMIL1Q5VZK9 1371 aa10.65□□□□□ -0.71
CDC40-207ENST00000606893 IGF1RP08069 1367 aa10.63□□□□□ -0.71
CDC40-207ENST00000606893 GAPVD1Q14C86 1478 aa10.63□□□□□ -0.71
CDC40-207ENST00000606893 DNMBPQ6XZF7 1577 aa10.63□□□□□ -0.71
CDC40-207ENST00000606893 EEA1Q15075 1411 aa10.62□□□□□ -0.71
CDC40-207ENST00000606893 RAPGEF2Q9Y4G8 1499 aa10.61□□□□□ -0.71
CDC40-207ENST00000606893 TOP2BQ02880 1626 aa10.6□□□□□ -0.71
CDC40-207ENST00000606893 CYB5RLQ6IPT4 315 aa10.6□□□□□ -0.71
CDC40-207ENST00000606893 APLP2Q06481 763 aa10.59□□□□□ -0.71
CDC40-207ENST00000606893 SNAPC4Q5SXM2 1469 aa10.58□□□□□ -0.72
CDC40-207ENST00000606893 OSCARQ8IYS5 282 aa10.56□□□□□ -0.72
CDC40-207ENST00000606893 THOC2Q8NI27 1593 aaKnown RBP10.56□□□□□ -0.72
CDC40-207ENST00000606893 IFT140Q96RY7 1462 aa10.54□□□□□ -0.72
CDC40-207ENST00000606893 ITGAEP38570 1179 aa10.54□□□□□ -0.72
CDC40-207ENST00000606893 WDR62O43379 1518 aa10.53□□□□□ -0.72
CDC40-207ENST00000606893 JPH4Q96JJ6 628 aa10.53□□□□□ -0.72
CDC40-207ENST00000606893 KCNH8Q96L42 1107 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms