RNA–Protein interactions for RNA: ENST00000495517.5

RBM41-208, Transcript of RNA binding motif protein 41, humanhuman

TSL 2

Gene RBM41, Length 3,315 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM41-208ENST00000495517 NISCHQ9Y2I1 1504 aa16.67■□□□□ 0.26
RBM41-208ENST00000495517 CCDC180Q9P1Z9 1646 aa15.07■□□□□ 0
RBM41-208ENST00000495517 CHIC1Q5VXU3 224 aa14.56□□□□□ -0.08
RBM41-208ENST00000495517 AEBP2Q6ZN18 517 aaPredicted RBP14.26□□□□□ -0.13
RBM41-208ENST00000495517 DCAF1Q9Y4B6 1507 aa14.26□□□□□ -0.13
RBM41-208ENST00000495517 MYO15BQ96JP2 1530 aa14.22□□□□□ -0.13
RBM41-208ENST00000495517 ZCCHC6Q5VYS8 1495 aaKnown RBP14.09□□□□□ -0.15
RBM41-208ENST00000495517 NACADO15069 1562 aa13.82□□□□□ -0.2
RBM41-208ENST00000495517 RB1CC1Q8TDY2 1594 aa13.6□□□□□ -0.23
RBM41-208ENST00000495517 SHROOM4Q9ULL8 1493 aa13.54□□□□□ -0.24
RBM41-208ENST00000495517 UNC13AQ9UPW8 1703 aa13.47□□□□□ -0.25
RBM41-208ENST00000495517 ABCC9O60706 1549 aa13.3□□□□□ -0.28
RBM41-208ENST00000495517 PHF23Q9BUL5 403 aaPredicted RBP13.23□□□□□ -0.29
RBM41-208ENST00000495517 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
RBM41-208ENST00000495517 SCRIBQ14160 1630 aa13.1□□□□□ -0.31
RBM41-208ENST00000495517 PEG3Q9GZU2 1588 aa13.07□□□□□ -0.32
RBM41-208ENST00000495517 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
RBM41-208ENST00000495517 BAZ1AQ9NRL2 1556 aaPredicted RBP12.93□□□□□ -0.34
RBM41-208ENST00000495517 SMARCA4P51532 1647 aa12.9□□□□□ -0.35
RBM41-208ENST00000495517 SMARCA2P51531 1590 aa12.85□□□□□ -0.35
RBM41-208ENST00000495517 HMGXB3Q12766 1538 aa12.77□□□□□ -0.36
RBM41-208ENST00000495517 TOP2AP11388 1531 aaKnown RBP12.71□□□□□ -0.38
RBM41-208ENST00000495517 RSF1Q96T23 1441 aaPredicted RBP12.7□□□□□ -0.38
RBM41-208ENST00000495517 EIF4G1Q04637 1599 aaKnown RBP12.68□□□□□ -0.38
RBM41-208ENST00000495517 PRDM2Q13029 1718 aa12.68□□□□□ -0.38
RBM41-208ENST00000495517 MROH2BQ7Z745 1585 aa12.68□□□□□ -0.38
RBM41-208ENST00000495517 NCAPD3P42695 1498 aa12.62□□□□□ -0.39
RBM41-208ENST00000495517 CECR2Q9BXF3 1484 aa12.61□□□□□ -0.39
RBM41-208ENST00000495517 WIZO95785 1651 aa12.6□□□□□ -0.39
RBM41-208ENST00000495517 ATAD2BQ9ULI0 1458 aa12.55□□□□□ -0.4
RBM41-208ENST00000495517 DCAF8L2P0C7V8 631 aa12.48□□□□□ -0.41
RBM41-208ENST00000495517 CC2D2AQ9P2K1 1620 aa12.46□□□□□ -0.41
RBM41-208ENST00000495517 SLC24A1O60721 1099 aa12.41□□□□□ -0.42
RBM41-208ENST00000495517 BAZ1BQ9UIG0 1483 aaKnown RBP12.37□□□□□ -0.43
RBM41-208ENST00000495517 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
RBM41-208ENST00000495517 CCDC88BA6NC98 1476 aa12.3□□□□□ -0.44
RBM41-208ENST00000495517 BIVM-ERCC5R4GMW8 1640 aa12.28□□□□□ -0.44
RBM41-208ENST00000495517 PLPPR3Q6T4P5 718 aa12.28□□□□□ -0.44
RBM41-208ENST00000495517 KCNA4P22459 653 aa12.27□□□□□ -0.44
RBM41-208ENST00000495517 CFTRP13569 1480 aa12.25□□□□□ -0.45
RBM41-208ENST00000495517 WDR97A6NE52 1622 aa12.2□□□□□ -0.46
RBM41-208ENST00000495517 PABPN1Q86U42 306 aaKnown RBP eCLIP12.2□□□□□ -0.46
RBM41-208ENST00000495517 TOP2BQ02880 1626 aa12.15□□□□□ -0.47
RBM41-208ENST00000495517 ABCC8Q09428 1581 aa12.08□□□□□ -0.48
RBM41-208ENST00000495517 CSRNP3Q8WYN3 585 aa12.06□□□□□ -0.48
RBM41-208ENST00000495517 CADPSQ9ULU8 1353 aa12.04□□□□□ -0.48
RBM41-208ENST00000495517 DNMBPQ6XZF7 1577 aa12.03□□□□□ -0.48
RBM41-208ENST00000495517 KIF21AQ7Z4S6 1674 aa11.99□□□□□ -0.49
RBM41-208ENST00000495517 ADRA2BP18089 450 aa11.99□□□□□ -0.49
RBM41-208ENST00000495517 WDR62O43379 1518 aa11.98□□□□□ -0.49
RBM41-208ENST00000495517 SYNJ1O43426 1573 aa11.98□□□□□ -0.49
RBM41-208ENST00000495517 THOC2Q8NI27 1593 aaKnown RBP11.98□□□□□ -0.49
RBM41-208ENST00000495517 EEA1Q15075 1411 aa11.97□□□□□ -0.49
RBM41-208ENST00000495517 RTN4Q9NQC3 1192 aaKnown RBP11.94□□□□□ -0.5
RBM41-208ENST00000495517 CUX1P39880 1505 aa11.93□□□□□ -0.5
RBM41-208ENST00000495517 KIF21BO75037 1637 aa11.91□□□□□ -0.5
RBM41-208ENST00000495517 PDS5BQ9NTI5 1447 aa11.9□□□□□ -0.5
RBM41-208ENST00000495517 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
RBM41-208ENST00000495517 ABCA5Q8WWZ7 1642 aa11.89□□□□□ -0.51
RBM41-208ENST00000495517 SUPT5HO00267 1087 aaKnown RBP11.88□□□□□ -0.51
RBM41-208ENST00000495517 FANCD2Q9BXW9 1451 aa11.88□□□□□ -0.51
RBM41-208ENST00000495517 WRNQ14191 1432 aaPredicted RBP eCLIP11.88□□□□□ -0.51
RBM41-208ENST00000495517 CEP164Q9UPV0 1460 aa11.86□□□□□ -0.51
RBM41-208ENST00000495517 ERICH3Q5RHP9 1530 aa11.86□□□□□ -0.51
RBM41-208ENST00000495517 CUL7Q14999 1698 aa11.85□□□□□ -0.51
RBM41-208ENST00000495517 ABCA10Q8WWZ4 1543 aa11.85□□□□□ -0.51
RBM41-208ENST00000495517 MRC2Q9UBG0 1479 aa11.84□□□□□ -0.51
RBM41-208ENST00000495517 TOPBP1Q92547 1522 aa11.84□□□□□ -0.51
RBM41-208ENST00000495517 URB2Q14146 1524 aaKnown RBP11.81□□□□□ -0.52
RBM41-208ENST00000495517 PBRM1Q86U86 1689 aa11.79□□□□□ -0.52
RBM41-208ENST00000495517 NESP48681 1621 aa11.73□□□□□ -0.53
RBM41-208ENST00000495517 POLA1P09884 1462 aaPredicted RBP11.72□□□□□ -0.53
RBM41-208ENST00000495517 IFT140Q96RY7 1462 aa11.72□□□□□ -0.53
RBM41-208ENST00000495517 FGD5Q6ZNL6 1462 aa11.71□□□□□ -0.53
RBM41-208ENST00000495517 PRXQ9BXM0 1461 aa11.7□□□□□ -0.54
RBM41-208ENST00000495517 CUX2O14529 1486 aa11.69□□□□□ -0.54
RBM41-208ENST00000495517 CTTNBP2Q8WZ74 1663 aa11.69□□□□□ -0.54
RBM41-208ENST00000495517 SLC4A1APQ9BWU0 796 aaKnown RBP11.66□□□□□ -0.54
RBM41-208ENST00000495517 ADAMTS12P58397 1594 aa11.65□□□□□ -0.54
RBM41-208ENST00000495517 DNAJC5BQ9UF47 199 aa11.65□□□□□ -0.54
RBM41-208ENST00000495517 KIF27Q86VH2 1401 aa11.62□□□□□ -0.55
RBM41-208ENST00000495517 EIF4G3O43432 1585 aaKnown RBP11.61□□□□□ -0.55
RBM41-208ENST00000495517 MAGI1Q96QZ7 1491 aaPredicted RBP11.58□□□□□ -0.56
RBM41-208ENST00000495517 GOLGA3Q08378 1498 aa11.57□□□□□ -0.56
RBM41-208ENST00000495517 SAMD9Q5K651 1589 aa11.56□□□□□ -0.56
RBM41-208ENST00000495517 EFCAB5A4FU69 1503 aa11.55□□□□□ -0.56
RBM41-208ENST00000495517 SHROOM2Q13796 1616 aa11.54□□□□□ -0.56
RBM41-208ENST00000495517 SOGA1O94964 1423 aa11.53□□□□□ -0.56
RBM41-208ENST00000495517 GRIN2BQ13224 1484 aa11.52□□□□□ -0.57
RBM41-208ENST00000495517 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.57
RBM41-208ENST00000495517 GAPVD1Q14C86 1478 aa11.5□□□□□ -0.57
RBM41-208ENST00000495517 RAPGEF2Q9Y4G8 1499 aa11.5□□□□□ -0.57
RBM41-208ENST00000495517 MAP3K1Q13233 1512 aa11.5□□□□□ -0.57
RBM41-208ENST00000495517 PPP6R1Q9UPN7 881 aa11.5□□□□□ -0.57
RBM41-208ENST00000495517 IGF1RP08069 1367 aa11.49□□□□□ -0.57
RBM41-208ENST00000495517 TRIM41Q8WV44 630 aa11.48□□□□□ -0.57
RBM41-208ENST00000495517 RUSC2Q8N2Y8 1516 aa11.48□□□□□ -0.57
RBM41-208ENST00000495517 FHAD1B1AJZ9 1412 aa11.48□□□□□ -0.57
RBM41-208ENST00000495517 UGGT2Q9NYU1 1516 aa11.47□□□□□ -0.57
RBM41-208ENST00000495517 SENP3Q9H4L4 574 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms