RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 NISCHQ9Y2I1 1504 aa16.4■□□□□ 0.22
CTDSPL-208ENST00000486978 ABCC9O60706 1549 aa15.58■□□□□ 0.08
CTDSPL-208ENST00000486978 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.04
CTDSPL-208ENST00000486978 AEBP2Q6ZN18 517 aaPredicted RBP15.12■□□□□ 0.01
CTDSPL-208ENST00000486978 CCDC180Q9P1Z9 1646 aa14.92□□□□□ -0.02
CTDSPL-208ENST00000486978 CHIC1Q5VXU3 224 aa14.61□□□□□ -0.07
CTDSPL-208ENST00000486978 RB1CC1Q8TDY2 1594 aa14.47□□□□□ -0.09
CTDSPL-208ENST00000486978 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
CTDSPL-208ENST00000486978 UNC13AQ9UPW8 1703 aa14.33□□□□□ -0.12
CTDSPL-208ENST00000486978 DNAJC5Q9H3Z4 198 aa14.3□□□□□ -0.12
CTDSPL-208ENST00000486978 NACADO15069 1562 aa14.22□□□□□ -0.13
CTDSPL-208ENST00000486978 BICRAQ9NZM4 1560 aa14.22□□□□□ -0.13
CTDSPL-208ENST00000486978 DCAF8L2P0C7V8 631 aa14.11□□□□□ -0.15
CTDSPL-208ENST00000486978 CC2D2AQ9P2K1 1620 aa14.04□□□□□ -0.16
CTDSPL-208ENST00000486978 CECR2Q9BXF3 1484 aa14.04□□□□□ -0.16
CTDSPL-208ENST00000486978 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.19
CTDSPL-208ENST00000486978 MYO15BQ96JP2 1530 aa13.8□□□□□ -0.2
CTDSPL-208ENST00000486978 SHROOM4Q9ULL8 1493 aa13.71□□□□□ -0.21
CTDSPL-208ENST00000486978 SCRIBQ14160 1630 aa13.64□□□□□ -0.23
CTDSPL-208ENST00000486978 CUX2O14529 1486 aa13.55□□□□□ -0.24
CTDSPL-208ENST00000486978 TRIM41Q8WV44 630 aa13.45□□□□□ -0.26
CTDSPL-208ENST00000486978 ZCCHC6Q5VYS8 1495 aaKnown RBP13.44□□□□□ -0.26
CTDSPL-208ENST00000486978 DCAF1Q9Y4B6 1507 aa13.43□□□□□ -0.26
CTDSPL-208ENST00000486978 ERCC6Q03468 1493 aa13.38□□□□□ -0.27
CTDSPL-208ENST00000486978 NESP48681 1621 aa13.27□□□□□ -0.29
CTDSPL-208ENST00000486978 THOC2Q8NI27 1593 aaKnown RBP13.2□□□□□ -0.3
CTDSPL-208ENST00000486978 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
CTDSPL-208ENST00000486978 ATAD2BQ9ULI0 1458 aa13.08□□□□□ -0.32
CTDSPL-208ENST00000486978 KIF21AQ7Z4S6 1674 aa13.06□□□□□ -0.32
CTDSPL-208ENST00000486978 SMARCA2P51531 1590 aa13.05□□□□□ -0.32
CTDSPL-208ENST00000486978 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
CTDSPL-208ENST00000486978 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
CTDSPL-208ENST00000486978 BAZ1AQ9NRL2 1556 aaPredicted RBP12.93□□□□□ -0.34
CTDSPL-208ENST00000486978 SMARCA4P51532 1647 aa12.92□□□□□ -0.34
CTDSPL-208ENST00000486978 BAZ1BQ9UIG0 1483 aaKnown RBP12.87□□□□□ -0.35
CTDSPL-208ENST00000486978 SENP3Q9H4L4 574 aaPredicted RBP12.87□□□□□ -0.35
CTDSPL-208ENST00000486978 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
CTDSPL-208ENST00000486978 RIMBP3CA6NJZ7 1639 aa12.85□□□□□ -0.35
CTDSPL-208ENST00000486978 RIMBP3BA6NNM3 1639 aa12.85□□□□□ -0.35
CTDSPL-208ENST00000486978 RIMBP3Q9UFD9 1639 aa12.85□□□□□ -0.35
CTDSPL-208ENST00000486978 PDS5BQ9NTI5 1447 aa12.85□□□□□ -0.35
CTDSPL-208ENST00000486978 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
CTDSPL-208ENST00000486978 WDR62O43379 1518 aa12.83□□□□□ -0.36
CTDSPL-208ENST00000486978 MRC2Q9UBG0 1479 aa12.82□□□□□ -0.36
CTDSPL-208ENST00000486978 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.37
CTDSPL-208ENST00000486978 CADPSQ9ULU8 1353 aa12.73□□□□□ -0.37
CTDSPL-208ENST00000486978 ARHGEF11O15085 1522 aa12.7□□□□□ -0.38
CTDSPL-208ENST00000486978 MROH2BQ7Z745 1585 aa12.69□□□□□ -0.38
CTDSPL-208ENST00000486978 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
CTDSPL-208ENST00000486978 CYB5RLQ6IPT4 315 aa12.66□□□□□ -0.38
CTDSPL-208ENST00000486978 CEP164Q9UPV0 1460 aa12.64□□□□□ -0.39
CTDSPL-208ENST00000486978 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
CTDSPL-208ENST00000486978 URB2Q14146 1524 aaKnown RBP12.6□□□□□ -0.39
CTDSPL-208ENST00000486978 ARAP1Q96P48 1450 aa12.57□□□□□ -0.4
CTDSPL-208ENST00000486978 ZNF608Q9ULD9 1512 aaPredicted RBP12.57□□□□□ -0.4
CTDSPL-208ENST00000486978 WIZO95785 1651 aa12.54□□□□□ -0.4
CTDSPL-208ENST00000486978 CHD1O14646 1710 aa12.48□□□□□ -0.41
CTDSPL-208ENST00000486978 CFTRP13569 1480 aa12.47□□□□□ -0.41
CTDSPL-208ENST00000486978 EIF4G3O43432 1585 aaKnown RBP12.41□□□□□ -0.42
CTDSPL-208ENST00000486978 IFT140Q96RY7 1462 aa12.4□□□□□ -0.43
CTDSPL-208ENST00000486978 AQRO60306 1485 aaKnown RBP eCLIP12.36□□□□□ -0.435e-9■■■■■ 26.9
CTDSPL-208ENST00000486978 ILDR1Q86SU0 546 aaPredicted RBP12.35□□□□□ -0.43
CTDSPL-208ENST00000486978 RSF1Q96T23 1441 aaPredicted RBP12.35□□□□□ -0.43
CTDSPL-208ENST00000486978 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
CTDSPL-208ENST00000486978 FBLN2P98095 1184 aa12.33□□□□□ -0.44
CTDSPL-208ENST00000486978 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
CTDSPL-208ENST00000486978 TARBP1Q13395 1621 aaKnown RBP12.3□□□□□ -0.44
CTDSPL-208ENST00000486978 CLASP1Q7Z460 1538 aa12.28□□□□□ -0.44
CTDSPL-208ENST00000486978 TOP2AP11388 1531 aaKnown RBP12.21□□□□□ -0.45
CTDSPL-208ENST00000486978 DNMBPQ6XZF7 1577 aa12.19□□□□□ -0.46
CTDSPL-208ENST00000486978 RAD54L2Q9Y4B4 1467 aa12.19□□□□□ -0.46
CTDSPL-208ENST00000486978 TDRD9Q8NDG6 1382 aaKnown RBP12.17□□□□□ -0.46
CTDSPL-208ENST00000486978 CCDC88BA6NC98 1476 aa12.16□□□□□ -0.46
CTDSPL-208ENST00000486978 POLA1P09884 1462 aaPredicted RBP12.16□□□□□ -0.46
CTDSPL-208ENST00000486978 GAPVD1Q14C86 1478 aa12.16□□□□□ -0.46
CTDSPL-208ENST00000486978 SNAPC4Q5SXM2 1469 aa12.16□□□□□ -0.46
CTDSPL-208ENST00000486978 ERCC6L2Q5T890 1561 aa12.15□□□□□ -0.46
CTDSPL-208ENST00000486978 KIF13AQ9H1H9 1805 aa12.15□□□□□ -0.46
CTDSPL-208ENST00000486978 KDM4FA0A1W2PPD8 638 aa12.14□□□□□ -0.47
CTDSPL-208ENST00000486978 SYNJ1O43426 1573 aa12.13□□□□□ -0.47
CTDSPL-208ENST00000486978 ABCC8Q09428 1581 aa12.13□□□□□ -0.47
CTDSPL-208ENST00000486978 CHMP7Q8WUX9 453 aaPredicted RBP12.11□□□□□ -0.47
CTDSPL-208ENST00000486978 SOGA1O94964 1423 aa12.08□□□□□ -0.48
CTDSPL-208ENST00000486978 SYNJ2O15056 1496 aa12.03□□□□□ -0.48
CTDSPL-208ENST00000486978 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
CTDSPL-208ENST00000486978 GRIN2BQ13224 1484 aa12□□□□□ -0.49
CTDSPL-208ENST00000486978 FGD5Q6ZNL6 1462 aa12□□□□□ -0.49
CTDSPL-208ENST00000486978 PBRM1Q86U86 1689 aa12□□□□□ -0.49
CTDSPL-208ENST00000486978 FOXD1Q16676 465 aa11.98□□□□□ -0.49
CTDSPL-208ENST00000486978 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
CTDSPL-208ENST00000486978 CEP170Q5SW79 1584 aa11.96□□□□□ -0.49
CTDSPL-208ENST00000486978 CUX1P39880 1505 aa11.94□□□□□ -0.5
CTDSPL-208ENST00000486978 FAM69CQ0P6D2 419 aa11.93□□□□□ -0.5
CTDSPL-208ENST00000486978 TSPOAP1O95153 1857 aa11.91□□□□□ -0.5
CTDSPL-208ENST00000486978 KDM6BO15054 1643 aa11.9□□□□□ -0.5
CTDSPL-208ENST00000486978 SHROOM2Q13796 1616 aa11.9□□□□□ -0.5
CTDSPL-208ENST00000486978 ABCC10Q5T3U5 1492 aa11.89□□□□□ -0.51
CTDSPL-208ENST00000486978 DIP2BQ9P265 1576 aa11.88□□□□□ -0.51
CTDSPL-208ENST00000486978 HECW2Q9P2P5 1572 aa11.88□□□□□ -0.51
CTDSPL-208ENST00000486978 ABCA5Q8WWZ7 1642 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms