RNA–Protein interactions for RNA: ENST00000343327.6

PTBP3-203, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 2 BASIC

Gene PTBP3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-203ENST00000343327 NISCHQ9Y2I1 1504 aa18.24■□□□□ 0.51
PTBP3-203ENST00000343327 CCDC180Q9P1Z9 1646 aa16.41■□□□□ 0.22
PTBP3-203ENST00000343327 ABCC9O60706 1549 aa15.6■□□□□ 0.09
PTBP3-203ENST00000343327 MYO15BQ96JP2 1530 aa15.47■□□□□ 0.07
PTBP3-203ENST00000343327 NACADO15069 1562 aa15.38■□□□□ 0.05
PTBP3-203ENST00000343327 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
PTBP3-203ENST00000343327 RB1CC1Q8TDY2 1594 aa15.33■□□□□ 0.04
PTBP3-203ENST00000343327 ZCCHC6Q5VYS8 1495 aaKnown RBP15.23■□□□□ 0.03
PTBP3-203ENST00000343327 SHROOM4Q9ULL8 1493 aa15□□□□□ -0.01
PTBP3-203ENST00000343327 UNC13AQ9UPW8 1703 aa14.85□□□□□ -0.03
PTBP3-203ENST00000343327 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.04
PTBP3-203ENST00000343327 DCAF8L2P0C7V8 631 aa14.7□□□□□ -0.06
PTBP3-203ENST00000343327 SCRIBQ14160 1630 aa14.6□□□□□ -0.07
PTBP3-203ENST00000343327 PABPN1Q86U42 306 aaKnown RBP eCLIP14.44□□□□□ -0.1
PTBP3-203ENST00000343327 EIF4G1Q04637 1599 aaKnown RBP14.38□□□□□ -0.11
PTBP3-203ENST00000343327 SUPT5HO00267 1087 aaKnown RBP14.29□□□□□ -0.12
PTBP3-203ENST00000343327 CC2D2AQ9P2K1 1620 aa14.27□□□□□ -0.13
PTBP3-203ENST00000343327 DNAJC5BQ9UF47 199 aa14.22□□□□□ -0.13
PTBP3-203ENST00000343327 PEG3Q9GZU2 1588 aa14.18□□□□□ -0.14
PTBP3-203ENST00000343327 BAZ1AQ9NRL2 1556 aaPredicted RBP14.18□□□□□ -0.14
PTBP3-203ENST00000343327 CECR2Q9BXF3 1484 aa14.15□□□□□ -0.14
PTBP3-203ENST00000343327 NCAPD3P42695 1498 aa14.14□□□□□ -0.15
PTBP3-203ENST00000343327 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
PTBP3-203ENST00000343327 SMARCA2P51531 1590 aa14.14□□□□□ -0.15
PTBP3-203ENST00000343327 HMGXB3Q12766 1538 aa14.12□□□□□ -0.15
PTBP3-203ENST00000343327 HRCP23327 699 aa14.07□□□□□ -0.16
PTBP3-203ENST00000343327 PPARGC1BQ86YN6 1023 aaKnown RBP14.06□□□□□ -0.16
PTBP3-203ENST00000343327 PCGF6Q9BYE7 350 aa14.05□□□□□ -0.16
PTBP3-203ENST00000343327 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
PTBP3-203ENST00000343327 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
PTBP3-203ENST00000343327 BAZ1BQ9UIG0 1483 aaKnown RBP13.9□□□□□ -0.18
PTBP3-203ENST00000343327 CHIC1Q5VXU3 224 aa13.84□□□□□ -0.19
PTBP3-203ENST00000343327 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
PTBP3-203ENST00000343327 TOP2AP11388 1531 aaKnown RBP13.78□□□□□ -0.2
PTBP3-203ENST00000343327 LAMC3Q9Y6N6 1575 aa13.78□□□□□ -0.2
PTBP3-203ENST00000343327 WIZO95785 1651 aa13.74□□□□□ -0.21
PTBP3-203ENST00000343327 LOC105371045A0A1W2PR82 267 aa13.71□□□□□ -0.21
PTBP3-203ENST00000343327 CUX2O14529 1486 aa13.64□□□□□ -0.23
PTBP3-203ENST00000343327 CADPSQ9ULU8 1353 aa13.63□□□□□ -0.23
PTBP3-203ENST00000343327 PDS5BQ9NTI5 1447 aa13.62□□□□□ -0.23
PTBP3-203ENST00000343327 CFTRP13569 1480 aa13.6□□□□□ -0.23
PTBP3-203ENST00000343327 PRDM2Q13029 1718 aa13.6□□□□□ -0.23
PTBP3-203ENST00000343327 THOC2Q8NI27 1593 aaKnown RBP13.53□□□□□ -0.24
PTBP3-203ENST00000343327 ERCC6Q03468 1493 aa13.53□□□□□ -0.24
PTBP3-203ENST00000343327 CCDC88BA6NC98 1476 aa13.49□□□□□ -0.25
PTBP3-203ENST00000343327 NESP48681 1621 aa13.49□□□□□ -0.25
PTBP3-203ENST00000343327 WDR62O43379 1518 aa13.48□□□□□ -0.25
PTBP3-203ENST00000343327 MRC2Q9UBG0 1479 aa13.47□□□□□ -0.25
PTBP3-203ENST00000343327 KIF21AQ7Z4S6 1674 aa13.46□□□□□ -0.26
PTBP3-203ENST00000343327 CEP164Q9UPV0 1460 aa13.44□□□□□ -0.26
PTBP3-203ENST00000343327 ABCC8Q09428 1581 aa13.44□□□□□ -0.26
PTBP3-203ENST00000343327 FANCD2Q9BXW9 1451 aa13.43□□□□□ -0.26
PTBP3-203ENST00000343327 EHMT2Q96KQ7 1210 aa13.41□□□□□ -0.26
PTBP3-203ENST00000343327 TRIM26Q12899 539 aaPredicted RBP13.4□□□□□ -0.26
PTBP3-203ENST00000343327 SCAF1Q9H7N4 1312 aaKnown RBP13.36□□□□□ -0.27
PTBP3-203ENST00000343327 WDR97A6NE52 1622 aa13.32□□□□□ -0.28
PTBP3-203ENST00000343327 DNMBPQ6XZF7 1577 aa13.3□□□□□ -0.28
PTBP3-203ENST00000343327 FAM9AQ8IZU1 332 aaPredicted RBP13.29□□□□□ -0.28
PTBP3-203ENST00000343327 URB2Q14146 1524 aaKnown RBP13.28□□□□□ -0.28
PTBP3-203ENST00000343327 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
PTBP3-203ENST00000343327 TOPBP1Q92547 1522 aa13.23□□□□□ -0.29
PTBP3-203ENST00000343327 PELP1Q8IZL8 1130 aaKnown RBP13.2□□□□□ -0.3
PTBP3-203ENST00000343327 TARBP1Q13395 1621 aaKnown RBP13.14□□□□□ -0.31
PTBP3-203ENST00000343327 ZEB1P37275 1124 aaPredicted RBP13.13□□□□□ -0.31
PTBP3-203ENST00000343327 BIVM-ERCC5R4GMW8 1640 aa13.13□□□□□ -0.31
PTBP3-203ENST00000343327 CUX1P39880 1505 aa13.1□□□□□ -0.31
PTBP3-203ENST00000343327 POLA1P09884 1462 aaPredicted RBP13.09□□□□□ -0.31
PTBP3-203ENST00000343327 TRIM41Q8WV44 630 aa13.09□□□□□ -0.31
PTBP3-203ENST00000343327 TOP2BQ02880 1626 aa13.09□□□□□ -0.31
PTBP3-203ENST00000343327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
PTBP3-203ENST00000343327 NEUROD1Q13562 356 aa13.06□□□□□ -0.32
PTBP3-203ENST00000343327 ABCA10Q8WWZ4 1543 aa13.05□□□□□ -0.32
PTBP3-203ENST00000343327 FGD5Q6ZNL6 1462 aa13.04□□□□□ -0.32
PTBP3-203ENST00000343327 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
PTBP3-203ENST00000343327 SOGA1O94964 1423 aa13.02□□□□□ -0.33
PTBP3-203ENST00000343327 WRNQ14191 1432 aaPredicted RBP eCLIP13.02□□□□□ -0.33
PTBP3-203ENST00000343327 DNAJC5Q9H3Z4 198 aa13.02□□□□□ -0.33
PTBP3-203ENST00000343327 TTBK1Q5TCY1 1321 aaPredicted RBP13.01□□□□□ -0.33
PTBP3-203ENST00000343327 MAGI1Q96QZ7 1491 aaPredicted RBP12.99□□□□□ -0.33
PTBP3-203ENST00000343327 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
PTBP3-203ENST00000343327 GTF3C3Q9Y5Q9 886 aa12.98□□□□□ -0.33
PTBP3-203ENST00000343327 ACIN1Q9UKV3 1341 aaKnown RBP12.98□□□□□ -0.33
PTBP3-203ENST00000343327 GRIN2BQ13224 1484 aa12.96□□□□□ -0.33
PTBP3-203ENST00000343327 ZNF608Q9ULD9 1512 aaPredicted RBP12.95□□□□□ -0.34
PTBP3-203ENST00000343327 CCER1Q8TC90 406 aaPredicted RBP12.95□□□□□ -0.34
PTBP3-203ENST00000343327 SYNJ1O43426 1573 aa12.95□□□□□ -0.34
PTBP3-203ENST00000343327 ERICH3Q5RHP9 1530 aa12.93□□□□□ -0.34
PTBP3-203ENST00000343327 PBRM1Q86U86 1689 aa12.91□□□□□ -0.34
PTBP3-203ENST00000343327 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
PTBP3-203ENST00000343327 GAPVD1Q14C86 1478 aa12.9□□□□□ -0.34
PTBP3-203ENST00000343327 SYNJ2O15056 1496 aa12.88□□□□□ -0.35
PTBP3-203ENST00000343327 DIEXFQ68CQ4 756 aaKnown RBP12.88□□□□□ -0.35
PTBP3-203ENST00000343327 AQRO60306 1485 aaKnown RBP eCLIP12.86□□□□□ -0.353e-6■□□□□ 10.9
PTBP3-203ENST00000343327 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
PTBP3-203ENST00000343327 YTHDC1Q96MU7 727 aaKnown RBP12.85□□□□□ -0.35
PTBP3-203ENST00000343327 ADAMTS12P58397 1594 aa12.84□□□□□ -0.35
PTBP3-203ENST00000343327 SNAPC4Q5SXM2 1469 aa12.83□□□□□ -0.36
PTBP3-203ENST00000343327 CHD1O14646 1710 aa12.83□□□□□ -0.36
PTBP3-203ENST00000343327 CLASP1Q7Z460 1538 aa12.83□□□□□ -0.36
PTBP3-203ENST00000343327 FHAD1B1AJZ9 1412 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms