RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 AEBP2Q6ZN18 517 aaPredicted RBP13.44□□□□□ -0.26
PDLIM5-214ENST00000510099 CHIC1Q5VXU3 224 aa12.57□□□□□ -0.4
PDLIM5-214ENST00000510099 SENP3Q9H4L4 574 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-214ENST00000510099 PHF23Q9BUL5 403 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-214ENST00000510099 FOXD1Q16676 465 aa10.76□□□□□ -0.69
PDLIM5-214ENST00000510099 NISCHQ9Y2I1 1504 aa10.53□□□□□ -0.72
PDLIM5-214ENST00000510099 POTEDQ86YR6 584 aa10.39□□□□□ -0.75
PDLIM5-214ENST00000510099 MSH5O43196 834 aa10.16□□□□□ -0.78
PDLIM5-214ENST00000510099 PIAS4Q8N2W9 510 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-214ENST00000510099 PLPPR3Q6T4P5 718 aa9.87□□□□□ -0.83
PDLIM5-214ENST00000510099 PPP6R1Q9UPN7 881 aa9.86□□□□□ -0.83
PDLIM5-214ENST00000510099 ADRA2BP18089 450 aa9.85□□□□□ -0.83
PDLIM5-214ENST00000510099 MAPK8IP2Q13387 824 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-214ENST00000510099 CCDC180Q9P1Z9 1646 aa9.12□□□□□ -0.95
PDLIM5-214ENST00000510099 DMRT2Q9Y5R5 561 aa9.06□□□□□ -0.96
PDLIM5-214ENST00000510099 SCAF1Q9H7N4 1312 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-214ENST00000510099 CACNB1Q02641 598 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-214ENST00000510099 ZCCHC6Q5VYS8 1495 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-214ENST00000510099 DCAF8L1A6NGE4 600 aa8.85□□□□□ -0.99
PDLIM5-214ENST00000510099 DCAF1Q9Y4B6 1507 aa8.75□□□□□ -1.01
PDLIM5-214ENST00000510099 SHROOM4Q9ULL8 1493 aa8.65□□□□□ -1.02
PDLIM5-214ENST00000510099 PPP4R3CPQ6ZMV5 832 aa8.64□□□□□ -1.03
PDLIM5-214ENST00000510099 RNF39Q9H2S5 420 aa8.63□□□□□ -1.03
PDLIM5-214ENST00000510099 HOXD11P31277 338 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-214ENST00000510099 MYO15BQ96JP2 1530 aa8.59□□□□□ -1.03
PDLIM5-214ENST00000510099 DCAF8L2P0C7V8 631 aa8.51□□□□□ -1.05
PDLIM5-214ENST00000510099 CNKSR2Q8WXI2 1034 aa8.51□□□□□ -1.05
PDLIM5-214ENST00000510099 C1QBPQ07021 282 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-214ENST00000510099 RNF216Q9NWF9 866 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-214ENST00000510099 ABCC9O60706 1549 aa8.45□□□□□ -1.06
PDLIM5-214ENST00000510099 NACADO15069 1562 aa8.45□□□□□ -1.06
PDLIM5-214ENST00000510099 SCRIBQ14160 1630 aa8.4□□□□□ -1.07
PDLIM5-214ENST00000510099 SUPT5HO00267 1087 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-214ENST00000510099 RB1CC1Q8TDY2 1594 aa8.33□□□□□ -1.08
PDLIM5-214ENST00000510099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.3□□□□□ -1.08
PDLIM5-214ENST00000510099 DNAJC5BQ9UF47 199 aa8.29□□□□□ -1.08
PDLIM5-214ENST00000510099 RSF1Q96T23 1441 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-214ENST00000510099 NCBP3Q53F19 620 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-214ENST00000510099 CECR2Q9BXF3 1484 aa8.16□□□□□ -1.1
PDLIM5-214ENST00000510099 MROH2BQ7Z745 1585 aa8.14□□□□□ -1.11
PDLIM5-214ENST00000510099 UNC13AQ9UPW8 1703 aa8.12□□□□□ -1.11
PDLIM5-214ENST00000510099 BAZ1AQ9NRL2 1556 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-214ENST00000510099 NPM3O75607 178 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-214ENST00000510099 POTEHQ6S545 545 aa8.1□□□□□ -1.11
PDLIM5-214ENST00000510099 BICRAQ9NZM4 1560 aa8.1□□□□□ -1.11
PDLIM5-214ENST00000510099 CAPN15O75808 1086 aa8.07□□□□□ -1.12
PDLIM5-214ENST00000510099 SMARCA4P51532 1647 aa8.07□□□□□ -1.12
PDLIM5-214ENST00000510099 WIZO95785 1651 aa8.05□□□□□ -1.12
PDLIM5-214ENST00000510099 SPINK5Q9NQ38 1064 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-214ENST00000510099 U3KPZ7 1027 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-214ENST00000510099 TOP2AP11388 1531 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-214ENST00000510099 DSG3P32926 999 aa8.01□□□□□ -1.13
PDLIM5-214ENST00000510099 EIF4G1Q04637 1599 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-214ENST00000510099 PEG3Q9GZU2 1588 aa7.99□□□□□ -1.13
PDLIM5-214ENST00000510099 PABPN1Q86U42 306 aaKnown RBP eCLIP7.97□□□□□ -1.13
PDLIM5-214ENST00000510099 SMARCA2P51531 1590 aa7.94□□□□□ -1.14
PDLIM5-214ENST00000510099 CCDC88BA6NC98 1476 aa7.91□□□□□ -1.14
PDLIM5-214ENST00000510099 ATAD2BQ9ULI0 1458 aa7.9□□□□□ -1.14
PDLIM5-214ENST00000510099 TRHP20396 242 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-214ENST00000510099 ABCB7O75027 752 aa7.88□□□□□ -1.15
PDLIM5-214ENST00000510099 TRIM41Q8WV44 630 aa7.86□□□□□ -1.15
PDLIM5-214ENST00000510099 BAZ1BQ9UIG0 1483 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-214ENST00000510099 HMGXB3Q12766 1538 aa7.83□□□□□ -1.16
PDLIM5-214ENST00000510099 NCAPD3P42695 1498 aa7.81□□□□□ -1.16
PDLIM5-214ENST00000510099 ZNF219Q9P2Y4 722 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-214ENST00000510099 APLP2Q06481 763 aa7.79□□□□□ -1.16
PDLIM5-214ENST00000510099 ABCC8Q09428 1581 aa7.79□□□□□ -1.16
PDLIM5-214ENST00000510099 SLC4A2P04920 1241 aa7.78□□□□□ -1.16
PDLIM5-214ENST00000510099 LOC105371045A0A1W2PR82 267 aa7.77□□□□□ -1.17
PDLIM5-214ENST00000510099 WRNQ14191 1432 aaPredicted RBP eCLIP7.74□□□□□ -1.17
PDLIM5-214ENST00000510099 KCNA4P22459 653 aa7.73□□□□□ -1.17
PDLIM5-214ENST00000510099 EEA1Q15075 1411 aa7.72□□□□□ -1.17
PDLIM5-214ENST00000510099 SYNJ1O43426 1573 aa7.71□□□□□ -1.17
PDLIM5-214ENST00000510099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-214ENST00000510099 HNRNPUL2Q1KMD3 747 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-214ENST00000510099 FAM9AQ8IZU1 332 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-214ENST00000510099 CFTRP13569 1480 aa7.68□□□□□ -1.18
PDLIM5-214ENST00000510099 SOGA1O94964 1423 aa7.68□□□□□ -1.18
PDLIM5-214ENST00000510099 SAMD1Q6SPF0 538 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-214ENST00000510099 TOP2BQ02880 1626 aa7.67□□□□□ -1.18
PDLIM5-214ENST00000510099 RBM42Q9BTD8 480 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-214ENST00000510099 CC2D2AQ9P2K1 1620 aa7.66□□□□□ -1.18
PDLIM5-214ENST00000510099 BIVM-ERCC5R4GMW8 1640 aa7.65□□□□□ -1.18
PDLIM5-214ENST00000510099 RUSC2Q8N2Y8 1516 aa7.62□□□□□ -1.19
PDLIM5-214ENST00000510099 GOLGA3Q08378 1498 aa7.62□□□□□ -1.19
PDLIM5-214ENST00000510099 KIF21BO75037 1637 aa7.62□□□□□ -1.19
PDLIM5-214ENST00000510099 CUX1P39880 1505 aa7.62□□□□□ -1.19
PDLIM5-214ENST00000510099 TNIKQ9UKE5 1360 aa7.61□□□□□ -1.19
PDLIM5-214ENST00000510099 CHRDL2Q6WN34 429 aa7.61□□□□□ -1.19
PDLIM5-214ENST00000510099 CEP164Q9UPV0 1460 aa7.61□□□□□ -1.19
PDLIM5-214ENST00000510099 PRDM2Q13029 1718 aa7.61□□□□□ -1.19
PDLIM5-214ENST00000510099 CADPSQ9ULU8 1353 aa7.6□□□□□ -1.19
PDLIM5-214ENST00000510099 CSRNP3Q8WYN3 585 aa7.6□□□□□ -1.19
PDLIM5-214ENST00000510099 CEP162Q5TB80 1403 aa7.6□□□□□ -1.19
PDLIM5-214ENST00000510099 PCGF6Q9BYE7 350 aa7.58□□□□□ -1.2
PDLIM5-214ENST00000510099 TRIM26Q12899 539 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-214ENST00000510099 POLA2Q14181 598 aa7.56□□□□□ -1.2
PDLIM5-214ENST00000510099 EHMT2Q96KQ7 1210 aa7.56□□□□□ -1.2
PDLIM5-214ENST00000510099 ERICH3Q5RHP9 1530 aa7.54□□□□□ -1.2
PDLIM5-214ENST00000510099 HRCP23327 699 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms