RNA–Protein interactions for RNA: ENST00000533305.5

LMO7-224, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-224ENST00000533305 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
LMO7-224ENST00000533305 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
LMO7-224ENST00000533305 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
LMO7-224ENST00000533305 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.52
LMO7-224ENST00000533305 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
LMO7-224ENST00000533305 NISCHQ9Y2I1 1504 aa16.99■□□□□ 0.31
LMO7-224ENST00000533305 FOXD1Q16676 465 aa16.84■□□□□ 0.29
LMO7-224ENST00000533305 PPP6R1Q9UPN7 881 aa16.24■□□□□ 0.19
LMO7-224ENST00000533305 ADRA2BP18089 450 aa16.22■□□□□ 0.19
LMO7-224ENST00000533305 PIAS4Q8N2W9 510 aaPredicted RBP15.92■□□□□ 0.14
LMO7-224ENST00000533305 MSH5O43196 834 aa15.66■□□□□ 0.1
LMO7-224ENST00000533305 PPP4R3CPQ6ZMV5 832 aa15.18■□□□□ 0.02
LMO7-224ENST00000533305 POTEDQ86YR6 584 aa15.14■□□□□ 0.01
LMO7-224ENST00000533305 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
LMO7-224ENST00000533305 NCBP3Q53F19 620 aaKnown RBP14.96□□□□□ -0.01
LMO7-224ENST00000533305 KCNA4P22459 653 aa14.9□□□□□ -0.02
LMO7-224ENST00000533305 CNKSR2Q8WXI2 1034 aa14.82□□□□□ -0.04
LMO7-224ENST00000533305 CCDC180Q9P1Z9 1646 aa14.67□□□□□ -0.06
LMO7-224ENST00000533305 MAPK8IP2Q13387 824 aaPredicted RBP14.63□□□□□ -0.07
LMO7-224ENST00000533305 DMRT2Q9Y5R5 561 aa14.62□□□□□ -0.07
LMO7-224ENST00000533305 NPM3O75607 178 aaKnown RBP14.58□□□□□ -0.08
LMO7-224ENST00000533305 RNF216Q9NWF9 866 aaPredicted RBP14.51□□□□□ -0.09
LMO7-224ENST00000533305 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
LMO7-224ENST00000533305 ZCCHC6Q5VYS8 1495 aaKnown RBP14.44□□□□□ -0.1
LMO7-224ENST00000533305 HOXD11P31277 338 aaPredicted RBP14.41□□□□□ -0.1
LMO7-224ENST00000533305 SLC4A1APQ9BWU0 796 aaKnown RBP14.28□□□□□ -0.12
LMO7-224ENST00000533305 DCAF1Q9Y4B6 1507 aa14.23□□□□□ -0.13
LMO7-224ENST00000533305 SHROOM4Q9ULL8 1493 aa13.94□□□□□ -0.18
LMO7-224ENST00000533305 EHMT2Q96KQ7 1210 aa13.87□□□□□ -0.19
LMO7-224ENST00000533305 MYO15BQ96JP2 1530 aa13.84□□□□□ -0.19
LMO7-224ENST00000533305 FOXD4L1Q9NU39 408 aa13.8□□□□□ -0.2
LMO7-224ENST00000533305 DCAF8L1A6NGE4 600 aa13.79□□□□□ -0.2
LMO7-224ENST00000533305 CSRNP3Q8WYN3 585 aa13.77□□□□□ -0.21
LMO7-224ENST00000533305 SUPT5HO00267 1087 aaKnown RBP13.75□□□□□ -0.21
LMO7-224ENST00000533305 SLC4A2P04920 1241 aa13.71□□□□□ -0.21
LMO7-224ENST00000533305 ABCC9O60706 1549 aa13.66□□□□□ -0.22
LMO7-224ENST00000533305 ZBTB22O15209 634 aa13.66□□□□□ -0.22
LMO7-224ENST00000533305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.231e-8■□□□□ 11.3
LMO7-224ENST00000533305 MYCNP04198 464 aaPredicted RBP13.58□□□□□ -0.24
LMO7-224ENST00000533305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.25
LMO7-224ENST00000533305 HNRNPUL2Q1KMD3 747 aaKnown RBP13.52□□□□□ -0.25
LMO7-224ENST00000533305 HRCP23327 699 aa13.48□□□□□ -0.25
LMO7-224ENST00000533305 ATXN8OSP0DMR3 200 aa13.46□□□□□ -0.25
LMO7-224ENST00000533305 NACADO15069 1562 aa13.42□□□□□ -0.26
LMO7-224ENST00000533305 SAMD1Q6SPF0 538 aaPredicted RBP13.42□□□□□ -0.26
LMO7-224ENST00000533305 U3KPZ7 1027 aaPredicted RBP13.4□□□□□ -0.26
LMO7-224ENST00000533305 RB1CC1Q8TDY2 1594 aa13.4□□□□□ -0.26
LMO7-224ENST00000533305 APLP2Q06481 763 aa13.38□□□□□ -0.27
LMO7-224ENST00000533305 RSF1Q96T23 1441 aaPredicted RBP13.37□□□□□ -0.27
LMO7-224ENST00000533305 DCAF8L2P0C7V8 631 aa13.35□□□□□ -0.27
LMO7-224ENST00000533305 RNF39Q9H2S5 420 aa13.35□□□□□ -0.27
LMO7-224ENST00000533305 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
LMO7-224ENST00000533305 C1QBPQ07021 282 aaKnown RBP13.3□□□□□ -0.28
LMO7-224ENST00000533305 SCRIBQ14160 1630 aa13.3□□□□□ -0.28
LMO7-224ENST00000533305 TRIM26Q12899 539 aaPredicted RBP13.16□□□□□ -0.3
LMO7-224ENST00000533305 PCGF6Q9BYE7 350 aa13.16□□□□□ -0.3
LMO7-224ENST00000533305 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.3
LMO7-224ENST00000533305 EIF4G1Q04637 1599 aaKnown RBP13.13□□□□□ -0.31
LMO7-224ENST00000533305 MROH2BQ7Z745 1585 aa13.07□□□□□ -0.32
LMO7-224ENST00000533305 ZEB1P37275 1124 aaPredicted RBP13.07□□□□□ -0.32
LMO7-224ENST00000533305 LOC105371045A0A1W2PR82 267 aa13.05□□□□□ -0.32
LMO7-224ENST00000533305 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
LMO7-224ENST00000533305 WIZO95785 1651 aa13.03□□□□□ -0.32
LMO7-224ENST00000533305 CECR2Q9BXF3 1484 aa13.02□□□□□ -0.33
LMO7-224ENST00000533305 TRIM41Q8WV44 630 aa12.99□□□□□ -0.33
LMO7-224ENST00000533305 ATF5Q9Y2D1 282 aaPredicted RBP12.98□□□□□ -0.33
LMO7-224ENST00000533305 TOP2AP11388 1531 aaKnown RBP12.98□□□□□ -0.33
LMO7-224ENST00000533305 UNC13AQ9UPW8 1703 aa12.96□□□□□ -0.33
LMO7-224ENST00000533305 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
LMO7-224ENST00000533305 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
LMO7-224ENST00000533305 CAPN15O75808 1086 aa12.9□□□□□ -0.34
LMO7-224ENST00000533305 PEG3Q9GZU2 1588 aa12.89□□□□□ -0.35
LMO7-224ENST00000533305 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
LMO7-224ENST00000533305 SMARCA2P51531 1590 aa12.86□□□□□ -0.35
LMO7-224ENST00000533305 EEA1Q15075 1411 aa12.85□□□□□ -0.35
LMO7-224ENST00000533305 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
LMO7-224ENST00000533305 PPARGC1BQ86YN6 1023 aaKnown RBP12.83□□□□□ -0.36
LMO7-224ENST00000533305 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
LMO7-224ENST00000533305 CCDC88BA6NC98 1476 aa12.76□□□□□ -0.37
LMO7-224ENST00000533305 DSG3P32926 999 aa12.72□□□□□ -0.37
LMO7-224ENST00000533305 POLA2Q14181 598 aa12.72□□□□□ -0.37
LMO7-224ENST00000533305 TNIKQ9UKE5 1360 aa12.7□□□□□ -0.38
LMO7-224ENST00000533305 BICRAQ9NZM4 1560 aa12.7□□□□□ -0.38
LMO7-224ENST00000533305 KIF21BO75037 1637 aa12.66□□□□□ -0.38
LMO7-224ENST00000533305 ABCC8Q09428 1581 aa12.65□□□□□ -0.38
LMO7-224ENST00000533305 FBLN2P98095 1184 aa12.65□□□□□ -0.38
LMO7-224ENST00000533305 CEP162Q5TB80 1403 aa12.61□□□□□ -0.39
LMO7-224ENST00000533305 FAM9AQ8IZU1 332 aaPredicted RBP12.6□□□□□ -0.39
LMO7-224ENST00000533305 GOLGA3Q08378 1498 aa12.59□□□□□ -0.39
LMO7-224ENST00000533305 PELP1Q8IZL8 1130 aaKnown RBP12.59□□□□□ -0.39
LMO7-224ENST00000533305 BAZ1BQ9UIG0 1483 aaKnown RBP12.59□□□□□ -0.39
LMO7-224ENST00000533305 ABCB7O75027 752 aa12.57□□□□□ -0.4
LMO7-224ENST00000533305 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
LMO7-224ENST00000533305 SOGA1O94964 1423 aa12.53□□□□□ -0.4
LMO7-224ENST00000533305 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
LMO7-224ENST00000533305 ATAD2BQ9ULI0 1458 aa12.5□□□□□ -0.41
LMO7-224ENST00000533305 SYNJ1O43426 1573 aa12.5□□□□□ -0.41
LMO7-224ENST00000533305 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
LMO7-224ENST00000533305 TOP2BQ02880 1626 aa12.48□□□□□ -0.41
LMO7-224ENST00000533305 ERICH3Q5RHP9 1530 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms