RNA–Protein interactions for RNA: ENST00000613370.1

IDH3B-212, Transcript of isocitrate dehydrogenase 3 (NAD(+)) beta, humanhuman

TSL 1 (best) BASIC

Gene IDH3B, Length 1,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3B-212ENST00000613370 NISCHQ9Y2I1 1504 aa34.87■■■■□ 3.17
IDH3B-212ENST00000613370 CCDC180Q9P1Z9 1646 aa31.32■■■□□ 2.61
IDH3B-212ENST00000613370 ABCC9O60706 1549 aa30.92■■■□□ 2.54
IDH3B-212ENST00000613370 RB1CC1Q8TDY2 1594 aa29.62■■■□□ 2.33
IDH3B-212ENST00000613370 NACADO15069 1562 aa29.47■■■□□ 2.31
IDH3B-212ENST00000613370 MYO15BQ96JP2 1530 aa29.17■■■□□ 2.26
IDH3B-212ENST00000613370 DCAF8L2P0C7V8 631 aa29.11■■■□□ 2.25
IDH3B-212ENST00000613370 UNC13AQ9UPW8 1703 aa29.08■■■□□ 2.25
IDH3B-212ENST00000613370 ZCCHC6Q5VYS8 1495 aaKnown RBP28.99■■■□□ 2.23
IDH3B-212ENST00000613370 DNAJC5BQ9UF47 199 aa28.91■■■□□ 2.22
IDH3B-212ENST00000613370 DCAF1Q9Y4B6 1507 aa28.88■■■□□ 2.21
IDH3B-212ENST00000613370 BICRAQ9NZM4 1560 aa28.76■■■□□ 2.19
IDH3B-212ENST00000613370 PABPN1Q86U42 306 aaKnown RBP eCLIP28.72■■■□□ 2.19
IDH3B-212ENST00000613370 SCRIBQ14160 1630 aa28.45■■■□□ 2.15
IDH3B-212ENST00000613370 SHROOM4Q9ULL8 1493 aa28.42■■■□□ 2.14
IDH3B-212ENST00000613370 CC2D2AQ9P2K1 1620 aa28.02■■■□□ 2.08
IDH3B-212ENST00000613370 EIF4G1Q04637 1599 aaKnown RBP28.02■■■□□ 2.08
IDH3B-212ENST00000613370 CECR2Q9BXF3 1484 aa27.84■■■□□ 2.05
IDH3B-212ENST00000613370 SMARCA4P51532 1647 aa27.21■■□□□ 1.95
IDH3B-212ENST00000613370 NCAPD3P42695 1498 aa27.15■■□□□ 1.94
IDH3B-212ENST00000613370 ATAD2BQ9ULI0 1458 aa27.1■■□□□ 1.93
IDH3B-212ENST00000613370 SMARCA2P51531 1590 aa27.08■■□□□ 1.93
IDH3B-212ENST00000613370 BAZ1AQ9NRL2 1556 aaPredicted RBP27.08■■□□□ 1.93
IDH3B-212ENST00000613370 HMGXB3Q12766 1538 aa27.05■■□□□ 1.92
IDH3B-212ENST00000613370 PEG3Q9GZU2 1588 aa26.97■■□□□ 1.91
IDH3B-212ENST00000613370 MROH2BQ7Z745 1585 aa26.86■■□□□ 1.89
IDH3B-212ENST00000613370 BAZ1BQ9UIG0 1483 aaKnown RBP26.86■■□□□ 1.89
IDH3B-212ENST00000613370 ERCC6Q03468 1493 aa26.67■■□□□ 1.86
IDH3B-212ENST00000613370 NESP48681 1621 aa26.64■■□□□ 1.86
IDH3B-212ENST00000613370 CUX2O14529 1486 aa26.61■■□□□ 1.85
IDH3B-212ENST00000613370 WIZO95785 1651 aa26.6■■□□□ 1.85
IDH3B-212ENST00000613370 LAMC3Q9Y6N6 1575 aa26.57■■□□□ 1.84
IDH3B-212ENST00000613370 DNAJC5Q9H3Z4 198 aa26.56■■□□□ 1.84
IDH3B-212ENST00000613370 THOC2Q8NI27 1593 aaKnown RBP26.44■■□□□ 1.82
IDH3B-212ENST00000613370 KIF21AQ7Z4S6 1674 aa26.43■■□□□ 1.82
IDH3B-212ENST00000613370 RSF1Q96T23 1441 aaPredicted RBP26.35■■□□□ 1.81
IDH3B-212ENST00000613370 PDS5BQ9NTI5 1447 aa26.31■■□□□ 1.8
IDH3B-212ENST00000613370 CADPSQ9ULU8 1353 aa26.3■■□□□ 1.8
IDH3B-212ENST00000613370 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
IDH3B-212ENST00000613370 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
IDH3B-212ENST00000613370 CFTRP13569 1480 aa26.1■■□□□ 1.77
IDH3B-212ENST00000613370 WDR62O43379 1518 aa26.09■■□□□ 1.77
IDH3B-212ENST00000613370 SUPT5HO00267 1087 aaKnown RBP26.06■■□□□ 1.76
IDH3B-212ENST00000613370 CEP164Q9UPV0 1460 aa26.06■■□□□ 1.76
IDH3B-212ENST00000613370 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
IDH3B-212ENST00000613370 FANCD2Q9BXW9 1451 aa26.03■■□□□ 1.76
IDH3B-212ENST00000613370 CCDC88BA6NC98 1476 aa25.91■■□□□ 1.74
IDH3B-212ENST00000613370 URB2Q14146 1524 aaKnown RBP25.82■■□□□ 1.72
IDH3B-212ENST00000613370 TOPBP1Q92547 1522 aa25.59■■□□□ 1.69
IDH3B-212ENST00000613370 DNMBPQ6XZF7 1577 aa25.55■■□□□ 1.68
IDH3B-212ENST00000613370 ABCC8Q09428 1581 aa25.55■■□□□ 1.68
IDH3B-212ENST00000613370 IFT140Q96RY7 1462 aa25.52■■□□□ 1.68
IDH3B-212ENST00000613370 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
IDH3B-212ENST00000613370 TRIM41Q8WV44 630 aa25.41■■□□□ 1.66
IDH3B-212ENST00000613370 EIF4G3O43432 1585 aaKnown RBP25.4■■□□□ 1.66
IDH3B-212ENST00000613370 TARBP1Q13395 1621 aaKnown RBP25.4■■□□□ 1.66
IDH3B-212ENST00000613370 POLA1P09884 1462 aaPredicted RBP25.34■■□□□ 1.65
IDH3B-212ENST00000613370 OSCARQ8IYS5 282 aa25.3■■□□□ 1.64
IDH3B-212ENST00000613370 CUX1P39880 1505 aa25.23■■□□□ 1.63
IDH3B-212ENST00000613370 FGD5Q6ZNL6 1462 aa25.21■■□□□ 1.63
IDH3B-212ENST00000613370 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.632e-8■■■■□ 19.7
IDH3B-212ENST00000613370 CHD1O14646 1710 aa25.2■■□□□ 1.63
IDH3B-212ENST00000613370 RAD54L2Q9Y4B4 1467 aa25.2■■□□□ 1.62
IDH3B-212ENST00000613370 WDR97A6NE52 1622 aa25.2■■□□□ 1.62
IDH3B-212ENST00000613370 SOGA1O94964 1423 aa25.16■■□□□ 1.62
IDH3B-212ENST00000613370 RIMBP3CA6NJZ7 1639 aa25.1■■□□□ 1.61
IDH3B-212ENST00000613370 RIMBP3BA6NNM3 1639 aa25.1■■□□□ 1.61
IDH3B-212ENST00000613370 RIMBP3Q9UFD9 1639 aa25.1■■□□□ 1.61
IDH3B-212ENST00000613370 TDRD9Q8NDG6 1382 aaKnown RBP25.06■■□□□ 1.6
IDH3B-212ENST00000613370 PBRM1Q86U86 1689 aa25.02■■□□□ 1.6
IDH3B-212ENST00000613370 ARHGEF11O15085 1522 aa25.02■■□□□ 1.6
IDH3B-212ENST00000613370 SNAPC4Q5SXM2 1469 aa25■■□□□ 1.59
IDH3B-212ENST00000613370 BIVM-ERCC5R4GMW8 1640 aa24.99■■□□□ 1.59
IDH3B-212ENST00000613370 MAGI1Q96QZ7 1491 aaPredicted RBP24.97■■□□□ 1.59
IDH3B-212ENST00000613370 GRIN2BQ13224 1484 aa24.97■■□□□ 1.59
IDH3B-212ENST00000613370 ABCA5Q8WWZ7 1642 aa24.96■■□□□ 1.59
IDH3B-212ENST00000613370 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
IDH3B-212ENST00000613370 TOP2BQ02880 1626 aa24.94■■□□□ 1.58
IDH3B-212ENST00000613370 GAPVD1Q14C86 1478 aa24.9■■□□□ 1.58
IDH3B-212ENST00000613370 SYNJ1O43426 1573 aa24.9■■□□□ 1.58
IDH3B-212ENST00000613370 FBLN2P98095 1184 aa24.9■■□□□ 1.58
IDH3B-212ENST00000613370 CLASP1Q7Z460 1538 aa24.87■■□□□ 1.57
IDH3B-212ENST00000613370 SYNJ2O15056 1496 aa24.87■■□□□ 1.57
IDH3B-212ENST00000613370 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
IDH3B-212ENST00000613370 CHMP7Q8WUX9 453 aaPredicted RBP24.79■■□□□ 1.56
IDH3B-212ENST00000613370 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
IDH3B-212ENST00000613370 ADAMTS12P58397 1594 aa24.74■■□□□ 1.55
IDH3B-212ENST00000613370 CYB5RLQ6IPT4 315 aa24.71■■□□□ 1.55
IDH3B-212ENST00000613370 GRIN2AQ12879 1464 aa24.66■■□□□ 1.54
IDH3B-212ENST00000613370 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
IDH3B-212ENST00000613370 CEP170Q5SW79 1584 aa24.6■■□□□ 1.53
IDH3B-212ENST00000613370 FHAD1B1AJZ9 1412 aa24.59■■□□□ 1.53
IDH3B-212ENST00000613370 CHIC1Q5VXU3 224 aa24.57■■□□□ 1.52
IDH3B-212ENST00000613370 NUP160Q12769 1436 aa24.57■■□□□ 1.52
IDH3B-212ENST00000613370 SHROOM2Q13796 1616 aa24.52■■□□□ 1.52
IDH3B-212ENST00000613370 TRHP20396 242 aaPredicted RBP24.47■■□□□ 1.51
IDH3B-212ENST00000613370 ERCC6L2Q5T890 1561 aa24.47■■□□□ 1.51
IDH3B-212ENST00000613370 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
IDH3B-212ENST00000613370 CUL7Q14999 1698 aa24.4■■□□□ 1.5
IDH3B-212ENST00000613370 KIF27Q86VH2 1401 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms