RNA–Protein interactions for RNA: ENST00000368932.5

CDC40-203, Transcript of cell division cycle 40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC40, Length 3,933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-203ENST00000368932 NISCHQ9Y2I1 1504 aa14.8□□□□□ -0.04
CDC40-203ENST00000368932 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
CDC40-203ENST00000368932 SHROOM4Q9ULL8 1493 aa13.89□□□□□ -0.19
CDC40-203ENST00000368932 SUPT5HO00267 1087 aaKnown RBP13.65□□□□□ -0.22
CDC40-203ENST00000368932 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
CDC40-203ENST00000368932 ABCC9O60706 1549 aa13.07□□□□□ -0.32
CDC40-203ENST00000368932 PABPN1Q86U42 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDC40-203ENST00000368932 FAM9AQ8IZU1 332 aaPredicted RBP12.88□□□□□ -0.35
CDC40-203ENST00000368932 RANGAP1P46060 587 aaPredicted RBP12.67□□□□□ -0.38
CDC40-203ENST00000368932 TTBK1Q5TCY1 1321 aaPredicted RBP12.63□□□□□ -0.39
CDC40-203ENST00000368932 CCDC180Q9P1Z9 1646 aa12.56□□□□□ -0.4
CDC40-203ENST00000368932 CHIC1Q5VXU3 224 aa12.53□□□□□ -0.4
CDC40-203ENST00000368932 TRIM41Q8WV44 630 aa12.43□□□□□ -0.42
CDC40-203ENST00000368932 PPARGC1BQ86YN6 1023 aaKnown RBP12.41□□□□□ -0.42
CDC40-203ENST00000368932 LOC105371045A0A1W2PR82 267 aa12.36□□□□□ -0.43
CDC40-203ENST00000368932 ZCCHC6Q5VYS8 1495 aaKnown RBP12.34□□□□□ -0.43
CDC40-203ENST00000368932 AEBP2Q6ZN18 517 aaPredicted RBP12.3□□□□□ -0.44
CDC40-203ENST00000368932 SCRIBQ14160 1630 aa12.3□□□□□ -0.44
CDC40-203ENST00000368932 ATP1B4Q9UN42 357 aaPredicted RBP12.23□□□□□ -0.45
CDC40-203ENST00000368932 UBTFP17480 764 aaKnown RBP12.2□□□□□ -0.46
CDC40-203ENST00000368932 PCGF6Q9BYE7 350 aa12.15□□□□□ -0.47
CDC40-203ENST00000368932 DCAF1Q9Y4B6 1507 aa12.09□□□□□ -0.47
CDC40-203ENST00000368932 APLP2Q06481 763 aa11.98□□□□□ -0.49
CDC40-203ENST00000368932 CECR2Q9BXF3 1484 aa11.95□□□□□ -0.5
CDC40-203ENST00000368932 FBLN2P98095 1184 aa11.92□□□□□ -0.5
CDC40-203ENST00000368932 ARID3CA6NKF2 412 aa11.9□□□□□ -0.51
CDC40-203ENST00000368932 ITGAEP38570 1179 aa11.89□□□□□ -0.51
CDC40-203ENST00000368932 P3H3Q8IVL6 736 aa11.86□□□□□ -0.51
CDC40-203ENST00000368932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
CDC40-203ENST00000368932 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
CDC40-203ENST00000368932 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
CDC40-203ENST00000368932 RSF1Q96T23 1441 aaPredicted RBP11.82□□□□□ -0.52
CDC40-203ENST00000368932 MYO15BQ96JP2 1530 aa11.81□□□□□ -0.52
CDC40-203ENST00000368932 NACADO15069 1562 aa11.73□□□□□ -0.53
CDC40-203ENST00000368932 DNAJC5BQ9UF47 199 aa11.7□□□□□ -0.54
CDC40-203ENST00000368932 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
CDC40-203ENST00000368932 CCER1Q8TC90 406 aaPredicted RBP11.66□□□□□ -0.54
CDC40-203ENST00000368932 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
CDC40-203ENST00000368932 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.56
CDC40-203ENST00000368932 BAZ1BQ9UIG0 1483 aaKnown RBP11.55□□□□□ -0.56
CDC40-203ENST00000368932 FAM50AQ14320 339 aaKnown RBP11.51□□□□□ -0.57
CDC40-203ENST00000368932 CNGB1Q14028 1251 aaPredicted RBP11.5□□□□□ -0.57
CDC40-203ENST00000368932 WIZO95785 1651 aa11.49□□□□□ -0.57
CDC40-203ENST00000368932 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
CDC40-203ENST00000368932 CCDC88BA6NC98 1476 aa11.44□□□□□ -0.58
CDC40-203ENST00000368932 ABCC8Q09428 1581 aa11.43□□□□□ -0.58
CDC40-203ENST00000368932 BAZ1AQ9NRL2 1556 aaPredicted RBP11.43□□□□□ -0.58
CDC40-203ENST00000368932 SOGA1O94964 1423 aa11.41□□□□□ -0.58
CDC40-203ENST00000368932 ZNF777Q9ULD5 760 aaPredicted RBP11.41□□□□□ -0.58
CDC40-203ENST00000368932 CHMP7Q8WUX9 453 aaPredicted RBP11.39□□□□□ -0.59
CDC40-203ENST00000368932 HRCP23327 699 aa11.38□□□□□ -0.59
CDC40-203ENST00000368932 WRNQ14191 1432 aaPredicted RBP eCLIP11.37□□□□□ -0.59
CDC40-203ENST00000368932 TDRD9Q8NDG6 1382 aaKnown RBP11.35□□□□□ -0.59
CDC40-203ENST00000368932 PLPPR3Q6T4P5 718 aa11.35□□□□□ -0.59
CDC40-203ENST00000368932 POLR3GLQ9BT43 218 aa11.34□□□□□ -0.59
CDC40-203ENST00000368932 SENP3Q9H4L4 574 aaPredicted RBP11.33□□□□□ -0.6
CDC40-203ENST00000368932 ATAD2BQ9ULI0 1458 aa11.33□□□□□ -0.6
CDC40-203ENST00000368932 ERCC6Q03468 1493 aa11.33□□□□□ -0.6
CDC40-203ENST00000368932 NEUROD1Q13562 356 aa11.33□□□□□ -0.6
CDC40-203ENST00000368932 CHIC2Q9UKJ5 165 aa11.3□□□□□ -0.6
CDC40-203ENST00000368932 PELP1Q8IZL8 1130 aaKnown RBP11.29□□□□□ -0.6
CDC40-203ENST00000368932 TRIM52Q96A61 297 aa11.29□□□□□ -0.6
CDC40-203ENST00000368932 YTHDC1Q96MU7 727 aaKnown RBP11.29□□□□□ -0.6
CDC40-203ENST00000368932 KCNH8Q96L42 1107 aa11.29□□□□□ -0.6
CDC40-203ENST00000368932 RUSC2Q8N2Y8 1516 aa11.28□□□□□ -0.6
CDC40-203ENST00000368932 PHF23Q9BUL5 403 aaPredicted RBP11.28□□□□□ -0.6
CDC40-203ENST00000368932 NESP48681 1621 aa11.24□□□□□ -0.61
CDC40-203ENST00000368932 SMARCA4P51532 1647 aa11.23□□□□□ -0.61
CDC40-203ENST00000368932 ZNF326Q5BKZ1 582 aaKnown RBP11.23□□□□□ -0.61
CDC40-203ENST00000368932 CUX2O14529 1486 aa11.21□□□□□ -0.61
CDC40-203ENST00000368932 CADPSQ9ULU8 1353 aa11.19□□□□□ -0.62
CDC40-203ENST00000368932 EIF4G1Q04637 1599 aaKnown RBP11.18□□□□□ -0.62
CDC40-203ENST00000368932 BICRAQ9NZM4 1560 aa11.17□□□□□ -0.62
CDC40-203ENST00000368932 CLIP1P30622 1438 aa11.16□□□□□ -0.62
CDC40-203ENST00000368932 SMARCA2P51531 1590 aa11.14□□□□□ -0.63
CDC40-203ENST00000368932 TOP2AP11388 1531 aaKnown RBP11.14□□□□□ -0.63
CDC40-203ENST00000368932 CEP162Q5TB80 1403 aa11.14□□□□□ -0.63
CDC40-203ENST00000368932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDC40-203ENST00000368932 KIF27Q86VH2 1401 aa11.12□□□□□ -0.63
CDC40-203ENST00000368932 RRP7BPQ9NSQ0 103 aa11.12□□□□□ -0.63
CDC40-203ENST00000368932 CARMIL1Q5VZK9 1371 aa11.11□□□□□ -0.63
CDC40-203ENST00000368932 RAD54L2Q9Y4B4 1467 aa11.11□□□□□ -0.63
CDC40-203ENST00000368932 KANK4Q5T7N3 995 aaPredicted RBP11.11□□□□□ -0.63
CDC40-203ENST00000368932 HIRIP3Q9BW71 556 aaPredicted RBP11.11□□□□□ -0.63
CDC40-203ENST00000368932 CC2D2AQ9P2K1 1620 aa11.07□□□□□ -0.64
CDC40-203ENST00000368932 CENPBP07199 599 aaPredicted RBP11.07□□□□□ -0.64
CDC40-203ENST00000368932 UNC13AQ9UPW8 1703 aa11.07□□□□□ -0.64
CDC40-203ENST00000368932 FANCD2Q9BXW9 1451 aa11.07□□□□□ -0.64
CDC40-203ENST00000368932 PDS5BQ9NTI5 1447 aa11.06□□□□□ -0.64
CDC40-203ENST00000368932 NPM1P06748 294 aaKnown RBP eCLIP11.06□□□□□ -0.64
CDC40-203ENST00000368932 SLC4A1APQ9BWU0 796 aaKnown RBP11.04□□□□□ -0.64
CDC40-203ENST00000368932 ZEB1P37275 1124 aaPredicted RBP11.04□□□□□ -0.64
CDC40-203ENST00000368932 MTUS2Q5JR59 1369 aa11.04□□□□□ -0.64
CDC40-203ENST00000368932 AQRO60306 1485 aaKnown RBP eCLIP11.04□□□□□ -0.64
CDC40-203ENST00000368932 GOLGA3Q08378 1498 aa11.02□□□□□ -0.64
CDC40-203ENST00000368932 RAPGEF2Q9Y4G8 1499 aa11.02□□□□□ -0.65
CDC40-203ENST00000368932 CHGAP10645 457 aaKnown RBP11.02□□□□□ -0.65
CDC40-203ENST00000368932 NCAPD3P42695 1498 aa11.02□□□□□ -0.65
CDC40-203ENST00000368932 CDK11AQ9UQ88 783 aaPredicted RBP11.01□□□□□ -0.65
CDC40-203ENST00000368932 CYB5RLQ6IPT4 315 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms