RNA–Protein interactions for RNA: ENST00000527657.1

BRPF3-208, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-208ENST00000527657 AEBP2Q6ZN18 517 aaPredicted RBP17.26■□□□□ 0.35
BRPF3-208ENST00000527657 CHIC1Q5VXU3 224 aa16.67■□□□□ 0.26
BRPF3-208ENST00000527657 SENP3Q9H4L4 574 aaPredicted RBP14.69□□□□□ -0.06
BRPF3-208ENST00000527657 PHF23Q9BUL5 403 aaPredicted RBP14.63□□□□□ -0.07
BRPF3-208ENST00000527657 FOXD1Q16676 465 aa13.64□□□□□ -0.23
BRPF3-208ENST00000527657 PLPPR3Q6T4P5 718 aa13.45□□□□□ -0.26
BRPF3-208ENST00000527657 PPP6R1Q9UPN7 881 aa12.96□□□□□ -0.33
BRPF3-208ENST00000527657 ADRA2BP18089 450 aa12.94□□□□□ -0.34
BRPF3-208ENST00000527657 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
BRPF3-208ENST00000527657 MSH5O43196 834 aa12.67□□□□□ -0.38
BRPF3-208ENST00000527657 NISCHQ9Y2I1 1504 aa12.46□□□□□ -0.42
BRPF3-208ENST00000527657 POTEDQ86YR6 584 aa11.87□□□□□ -0.51
BRPF3-208ENST00000527657 SCAF1Q9H7N4 1312 aaKnown RBP11.86□□□□□ -0.51
BRPF3-208ENST00000527657 PPP4R3CPQ6ZMV5 832 aa11.81□□□□□ -0.52
BRPF3-208ENST00000527657 MAPK8IP2Q13387 824 aaPredicted RBP11.79□□□□□ -0.52
BRPF3-208ENST00000527657 DMRT2Q9Y5R5 561 aa11.69□□□□□ -0.54
BRPF3-208ENST00000527657 CNKSR2Q8WXI2 1034 aa11.54□□□□□ -0.56
BRPF3-208ENST00000527657 NCBP3Q53F19 620 aaKnown RBP11.45□□□□□ -0.58
BRPF3-208ENST00000527657 HOXD11P31277 338 aaPredicted RBP11.37□□□□□ -0.59
BRPF3-208ENST00000527657 RNF216Q9NWF9 866 aaPredicted RBP11.37□□□□□ -0.59
BRPF3-208ENST00000527657 KCNA4P22459 653 aa11.32□□□□□ -0.6
BRPF3-208ENST00000527657 NPM3O75607 178 aaKnown RBP11.29□□□□□ -0.6
BRPF3-208ENST00000527657 DCAF8L1A6NGE4 600 aa11.18□□□□□ -0.62
BRPF3-208ENST00000527657 CCDC180Q9P1Z9 1646 aa11.06□□□□□ -0.64
BRPF3-208ENST00000527657 DNAJC5BQ9UF47 199 aa11.01□□□□□ -0.65
BRPF3-208ENST00000527657 RNF39Q9H2S5 420 aa10.84□□□□□ -0.67
BRPF3-208ENST00000527657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.82□□□□□ -0.68
BRPF3-208ENST00000527657 SLC4A1APQ9BWU0 796 aaKnown RBP10.75□□□□□ -0.69
BRPF3-208ENST00000527657 EHMT2Q96KQ7 1210 aa10.74□□□□□ -0.69
BRPF3-208ENST00000527657 SLC4A2P04920 1241 aa10.71□□□□□ -0.69
BRPF3-208ENST00000527657 C1QBPQ07021 282 aaKnown RBP10.69□□□□□ -0.7
BRPF3-208ENST00000527657 CACNB1Q02641 598 aaPredicted RBP10.68□□□□□ -0.7
BRPF3-208ENST00000527657 ABCC9O60706 1549 aa10.65□□□□□ -0.7
BRPF3-208ENST00000527657 U3KPZ7 1027 aaPredicted RBP10.64□□□□□ -0.71
BRPF3-208ENST00000527657 MYO15BQ96JP2 1530 aa10.53□□□□□ -0.72
BRPF3-208ENST00000527657 FOXD4L1Q9NU39 408 aa10.49□□□□□ -0.73
BRPF3-208ENST00000527657 CSRNP3Q8WYN3 585 aa10.47□□□□□ -0.73
BRPF3-208ENST00000527657 NACADO15069 1562 aa10.45□□□□□ -0.74
BRPF3-208ENST00000527657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.45□□□□□ -0.74
BRPF3-208ENST00000527657 HNRNPUL2Q1KMD3 747 aaKnown RBP10.45□□□□□ -0.74
BRPF3-208ENST00000527657 MYCNP04198 464 aaPredicted RBP10.44□□□□□ -0.74
BRPF3-208ENST00000527657 DCAF1Q9Y4B6 1507 aa10.43□□□□□ -0.74
BRPF3-208ENST00000527657 ZBTB22O15209 634 aa10.43□□□□□ -0.74
BRPF3-208ENST00000527657 SAMD1Q6SPF0 538 aaPredicted RBP10.4□□□□□ -0.74
BRPF3-208ENST00000527657 RB1CC1Q8TDY2 1594 aa10.39□□□□□ -0.75
BRPF3-208ENST00000527657 SPINK5Q9NQ38 1064 aaPredicted RBP10.39□□□□□ -0.75
BRPF3-208ENST00000527657 APLP2Q06481 763 aa10.38□□□□□ -0.75
BRPF3-208ENST00000527657 ZCCHC6Q5VYS8 1495 aaKnown RBP10.36□□□□□ -0.75
BRPF3-208ENST00000527657 CAPN15O75808 1086 aa10.36□□□□□ -0.75
BRPF3-208ENST00000527657 ZNF219Q9P2Y4 722 aaPredicted RBP10.27□□□□□ -0.77
BRPF3-208ENST00000527657 TRHP20396 242 aaPredicted RBP10.26□□□□□ -0.77
BRPF3-208ENST00000527657 DCAF8L2P0C7V8 631 aa10.25□□□□□ -0.77
BRPF3-208ENST00000527657 DSG3P32926 999 aa10.24□□□□□ -0.77
BRPF3-208ENST00000527657 ATF5Q9Y2D1 282 aaPredicted RBP10.17□□□□□ -0.78
BRPF3-208ENST00000527657 SHROOM4Q9ULL8 1493 aa10.15□□□□□ -0.78
BRPF3-208ENST00000527657 ABCB7O75027 752 aa10.14□□□□□ -0.79
BRPF3-208ENST00000527657 ATXN8OSP0DMR3 200 aa10.14□□□□□ -0.79
BRPF3-208ENST00000527657 POLA2Q14181 598 aa10.05□□□□□ -0.8
BRPF3-208ENST00000527657 BICRAQ9NZM4 1560 aa10.01□□□□□ -0.81
BRPF3-208ENST00000527657 UNC13AQ9UPW8 1703 aa9.98□□□□□ -0.81
BRPF3-208ENST00000527657 PABPN1Q86U42 306 aaKnown RBP eCLIP9.96□□□□□ -0.82
BRPF3-208ENST00000527657 SCRIBQ14160 1630 aa9.9□□□□□ -0.82
BRPF3-208ENST00000527657 ZBTB12Q9Y330 459 aaPredicted RBP9.89□□□□□ -0.83
BRPF3-208ENST00000527657 RBM42Q9BTD8 480 aaKnown RBP9.78□□□□□ -0.84
BRPF3-208ENST00000527657 EIF4G1Q04637 1599 aaKnown RBP9.76□□□□□ -0.85
BRPF3-208ENST00000527657 FBLN2P98095 1184 aa9.76□□□□□ -0.85
BRPF3-208ENST00000527657 OSCARQ8IYS5 282 aa9.74□□□□□ -0.85
BRPF3-208ENST00000527657 MKRN4PQ13434 485 aaPredicted RBP9.72□□□□□ -0.85
BRPF3-208ENST00000527657 CC2D2AQ9P2K1 1620 aa9.68□□□□□ -0.86
BRPF3-208ENST00000527657 NCAPD3P42695 1498 aa9.68□□□□□ -0.86
BRPF3-208ENST00000527657 BAZ1AQ9NRL2 1556 aaPredicted RBP9.67□□□□□ -0.86
BRPF3-208ENST00000527657 CECR2Q9BXF3 1484 aa9.66□□□□□ -0.86
BRPF3-208ENST00000527657 PEG3Q9GZU2 1588 aa9.63□□□□□ -0.87
BRPF3-208ENST00000527657 SMARCA2P51531 1590 aa9.61□□□□□ -0.87
BRPF3-208ENST00000527657 ATAD2BQ9ULI0 1458 aa9.6□□□□□ -0.87
BRPF3-208ENST00000527657 SPDYE2BA6NHP3 402 aa9.6□□□□□ -0.87
BRPF3-208ENST00000527657 SPDYE6P0CI01 402 aa9.6□□□□□ -0.87
BRPF3-208ENST00000527657 SPDYE2Q495Y8 402 aa9.6□□□□□ -0.87
BRPF3-208ENST00000527657 AKT1S1Q96B36 256 aa9.6□□□□□ -0.87
BRPF3-208ENST00000527657 SMARCA4P51532 1647 aa9.59□□□□□ -0.87
BRPF3-208ENST00000527657 HMGXB3Q12766 1538 aa9.57□□□□□ -0.88
BRPF3-208ENST00000527657 ZNF692Q9BU19 519 aaPredicted RBP9.52□□□□□ -0.89
BRPF3-208ENST00000527657 MROH2BQ7Z745 1585 aa9.51□□□□□ -0.89
BRPF3-208ENST00000527657 REM2Q8IYK8 340 aaPredicted RBP9.51□□□□□ -0.89
BRPF3-208ENST00000527657 SSUH2Q9Y2M2 353 aa9.51□□□□□ -0.89
BRPF3-208ENST00000527657 RSF1Q96T23 1441 aaPredicted RBP9.48□□□□□ -0.89
BRPF3-208ENST00000527657 BAZ1BQ9UIG0 1483 aaKnown RBP9.47□□□□□ -0.89
BRPF3-208ENST00000527657 CHRDL2Q6WN34 429 aa9.44□□□□□ -0.9
BRPF3-208ENST00000527657 SPDYE4A6NLX3 237 aa9.41□□□□□ -0.9
BRPF3-208ENST00000527657 PITPNM1O00562 1244 aa9.41□□□□□ -0.9
BRPF3-208ENST00000527657 FKBP8Q14318 412 aa9.41□□□□□ -0.9
BRPF3-208ENST00000527657 CADPSQ9ULU8 1353 aa9.37□□□□□ -0.91
BRPF3-208ENST00000527657 TOP2AP11388 1531 aaKnown RBP9.36□□□□□ -0.91
BRPF3-208ENST00000527657 POTEHQ6S545 545 aa9.36□□□□□ -0.91
BRPF3-208ENST00000527657 SPDYE1Q8NFV5 336 aaPredicted RBP9.36□□□□□ -0.91
BRPF3-208ENST00000527657 WIZO95785 1651 aa9.36□□□□□ -0.91
BRPF3-208ENST00000527657 LAMC3Q9Y6N6 1575 aa9.35□□□□□ -0.91
BRPF3-208ENST00000527657 PDS5BQ9NTI5 1447 aa9.33□□□□□ -0.92
BRPF3-208ENST00000527657 CLEC11AQ9Y240 323 aa9.32□□□□□ -0.92
BRPF3-208ENST00000527657 CFTRP13569 1480 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms