RNA–Protein interactions for RNA: ENST00000458258.5

PTBP3-207, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene PTBP3, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-207ENST00000458258 NISCHQ9Y2I1 1504 aa12.43□□□□□ -0.42
PTBP3-207ENST00000458258 SHROOM4Q9ULL8 1493 aa11.01□□□□□ -0.65
PTBP3-207ENST00000458258 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
PTBP3-207ENST00000458258 SUPT5HO00267 1087 aaKnown RBP10.61□□□□□ -0.71
PTBP3-207ENST00000458258 ABCC9O60706 1549 aa10.49□□□□□ -0.73
PTBP3-207ENST00000458258 ZCCHC6Q5VYS8 1495 aaKnown RBP10.42□□□□□ -0.74
PTBP3-207ENST00000458258 PABPN1Q86U42 306 aaKnown RBP eCLIP10.21□□□□□ -0.78
PTBP3-207ENST00000458258 CCDC180Q9P1Z9 1646 aa10.16□□□□□ -0.78
PTBP3-207ENST00000458258 CECR2Q9BXF3 1484 aa10.08□□□□□ -0.8
PTBP3-207ENST00000458258 EHMT2Q96KQ7 1210 aa10.08□□□□□ -0.8
PTBP3-207ENST00000458258 SCRIBQ14160 1630 aa10.05□□□□□ -0.8
PTBP3-207ENST00000458258 CHIC1Q5VXU3 224 aa10.04□□□□□ -0.8
PTBP3-207ENST00000458258 MYO15BQ96JP2 1530 aa9.99□□□□□ -0.81
PTBP3-207ENST00000458258 LOC105371045A0A1W2PR82 267 aa9.98□□□□□ -0.81
PTBP3-207ENST00000458258 RSF1Q96T23 1441 aaPredicted RBP9.93□□□□□ -0.82
PTBP3-207ENST00000458258 FAM9AQ8IZU1 332 aaPredicted RBP9.92□□□□□ -0.82
PTBP3-207ENST00000458258 DNAJC5BQ9UF47 199 aa9.88□□□□□ -0.83
PTBP3-207ENST00000458258 DCAF1Q9Y4B6 1507 aa9.88□□□□□ -0.83
PTBP3-207ENST00000458258 MROH2BQ7Z745 1585 aa9.85□□□□□ -0.83
PTBP3-207ENST00000458258 PPARGC1BQ86YN6 1023 aaKnown RBP9.71□□□□□ -0.86
PTBP3-207ENST00000458258 RB1CC1Q8TDY2 1594 aa9.69□□□□□ -0.86
PTBP3-207ENST00000458258 NACADO15069 1562 aa9.66□□□□□ -0.86
PTBP3-207ENST00000458258 BICRAQ9NZM4 1560 aa9.64□□□□□ -0.87
PTBP3-207ENST00000458258 TRIM41Q8WV44 630 aa9.64□□□□□ -0.87
PTBP3-207ENST00000458258 WIZO95785 1651 aa9.62□□□□□ -0.87
PTBP3-207ENST00000458258 TTBK1Q5TCY1 1321 aaPredicted RBP9.58□□□□□ -0.88
PTBP3-207ENST00000458258 RUSC2Q8N2Y8 1516 aa9.53□□□□□ -0.88
PTBP3-207ENST00000458258 RANGAP1P46060 587 aaPredicted RBP9.53□□□□□ -0.88
PTBP3-207ENST00000458258 CCDC88BA6NC98 1476 aa9.53□□□□□ -0.88
PTBP3-207ENST00000458258 ABCC8Q09428 1581 aa9.5□□□□□ -0.89
PTBP3-207ENST00000458258 PCGF6Q9BYE7 350 aa9.5□□□□□ -0.89
PTBP3-207ENST00000458258 SOGA1O94964 1423 aa9.49□□□□□ -0.89
PTBP3-207ENST00000458258 ATAD2BQ9ULI0 1458 aa9.45□□□□□ -0.9
PTBP3-207ENST00000458258 BAZ1AQ9NRL2 1556 aaPredicted RBP9.41□□□□□ -0.9
PTBP3-207ENST00000458258 SMARCA4P51532 1647 aa9.39□□□□□ -0.91
PTBP3-207ENST00000458258 SMARCA2P51531 1590 aa9.36□□□□□ -0.91
PTBP3-207ENST00000458258 UNC13AQ9UPW8 1703 aa9.34□□□□□ -0.91
PTBP3-207ENST00000458258 TOP2AP11388 1531 aaKnown RBP9.3□□□□□ -0.92
PTBP3-207ENST00000458258 NESP48681 1621 aa9.3□□□□□ -0.92
PTBP3-207ENST00000458258 BAZ1BQ9UIG0 1483 aaKnown RBP9.29□□□□□ -0.92
PTBP3-207ENST00000458258 EIF4G1Q04637 1599 aaKnown RBP9.28□□□□□ -0.92
PTBP3-207ENST00000458258 CSRNP3Q8WYN3 585 aa9.27□□□□□ -0.93
PTBP3-207ENST00000458258 UBTFP17480 764 aaKnown RBP9.25□□□□□ -0.93
PTBP3-207ENST00000458258 WRNQ14191 1432 aaPredicted RBP eCLIP9.24□□□□□ -0.93
PTBP3-207ENST00000458258 NCAPD3P42695 1498 aa9.21□□□□□ -0.93
PTBP3-207ENST00000458258 SYNJ1O43426 1573 aa9.2□□□□□ -0.94
PTBP3-207ENST00000458258 P3H3Q8IVL6 736 aa9.19□□□□□ -0.94
PTBP3-207ENST00000458258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.14□□□□□ -0.95
PTBP3-207ENST00000458258 RAD54L2Q9Y4B4 1467 aa9.13□□□□□ -0.95
PTBP3-207ENST00000458258 RAPGEF2Q9Y4G8 1499 aa9.13□□□□□ -0.95
PTBP3-207ENST00000458258 TDRD9Q8NDG6 1382 aaKnown RBP9.12□□□□□ -0.95
PTBP3-207ENST00000458258 CADPSQ9ULU8 1353 aa9.11□□□□□ -0.95
PTBP3-207ENST00000458258 CC2D2AQ9P2K1 1620 aa9.11□□□□□ -0.95
PTBP3-207ENST00000458258 KANK4Q5T7N3 995 aaPredicted RBP9.11□□□□□ -0.95
PTBP3-207ENST00000458258 ARID3CA6NKF2 412 aa9.1□□□□□ -0.95
PTBP3-207ENST00000458258 CUX1P39880 1505 aa9.1□□□□□ -0.95
PTBP3-207ENST00000458258 PEG3Q9GZU2 1588 aa9.1□□□□□ -0.95
PTBP3-207ENST00000458258 HRCP23327 699 aa9.09□□□□□ -0.95
PTBP3-207ENST00000458258 CEP162Q5TB80 1403 aa9.09□□□□□ -0.95
PTBP3-207ENST00000458258 CFTRP13569 1480 aa9.07□□□□□ -0.96
PTBP3-207ENST00000458258 HNRNPUL2Q1KMD3 747 aaKnown RBP9.05□□□□□ -0.96
PTBP3-207ENST00000458258 TRIM26Q12899 539 aaPredicted RBP9.05□□□□□ -0.96
PTBP3-207ENST00000458258 IGF1RP08069 1367 aa9.05□□□□□ -0.96
PTBP3-207ENST00000458258 CUX2O14529 1486 aa9.01□□□□□ -0.97
PTBP3-207ENST00000458258 FANCD2Q9BXW9 1451 aa9□□□□□ -0.97
PTBP3-207ENST00000458258 TNIKQ9UKE5 1360 aa8.99□□□□□ -0.97
PTBP3-207ENST00000458258 ITGAEP38570 1179 aa8.99□□□□□ -0.97
PTBP3-207ENST00000458258 FGD5Q6ZNL6 1462 aa8.98□□□□□ -0.97
PTBP3-207ENST00000458258 ATP1B4Q9UN42 357 aaPredicted RBP8.98□□□□□ -0.97
PTBP3-207ENST00000458258 AQRO60306 1485 aaKnown RBP eCLIP8.96□□□□□ -0.972e-6■□□□□ 10.5
PTBP3-207ENST00000458258 HMGXB3Q12766 1538 aa8.96□□□□□ -0.97
PTBP3-207ENST00000458258 URB2Q14146 1524 aaKnown RBP8.96□□□□□ -0.97
PTBP3-207ENST00000458258 CLIP1P30622 1438 aa8.95□□□□□ -0.98
PTBP3-207ENST00000458258 ARAP1Q96P48 1450 aa8.94□□□□□ -0.98
PTBP3-207ENST00000458258 PRXQ9BXM0 1461 aa8.93□□□□□ -0.98
PTBP3-207ENST00000458258 ZNF608Q9ULD9 1512 aaPredicted RBP8.93□□□□□ -0.98
PTBP3-207ENST00000458258 POLA1P09884 1462 aaPredicted RBP8.92□□□□□ -0.98
PTBP3-207ENST00000458258 CARMIL1Q5VZK9 1371 aa8.91□□□□□ -0.98
PTBP3-207ENST00000458258 GOLGA3Q08378 1498 aa8.91□□□□□ -0.98
PTBP3-207ENST00000458258 FBLN2P98095 1184 aa8.9□□□□□ -0.98
PTBP3-207ENST00000458258 TOPBP1Q92547 1522 aa8.88□□□□□ -0.99
PTBP3-207ENST00000458258 FHOD3Q2V2M9 1422 aa8.88□□□□□ -0.99
PTBP3-207ENST00000458258 PDS5BQ9NTI5 1447 aa8.87□□□□□ -0.99
PTBP3-207ENST00000458258 TOP2BQ02880 1626 aa8.87□□□□□ -0.99
PTBP3-207ENST00000458258 KIF21BO75037 1637 aa8.86□□□□□ -0.99
PTBP3-207ENST00000458258 KIF27Q86VH2 1401 aa8.86□□□□□ -0.99
PTBP3-207ENST00000458258 CEP164Q9UPV0 1460 aa8.86□□□□□ -0.99
PTBP3-207ENST00000458258 ARHGAP35Q9NRY4 1499 aa8.84□□□□□ -0.99
PTBP3-207ENST00000458258 CCER1Q8TC90 406 aaPredicted RBP8.82□□□□□ -1
PTBP3-207ENST00000458258 VPS8Q8N3P4 1428 aa8.8□□□□□ -1
PTBP3-207ENST00000458258 EEA1Q15075 1411 aa8.79□□□□□ -1
PTBP3-207ENST00000458258 PHLDB1Q86UU1 1377 aa8.78□□□□□ -1
PTBP3-207ENST00000458258 ZNF644Q9H582 1327 aaPredicted RBP8.75□□□□□ -1.01
PTBP3-207ENST00000458258 HIRIP3Q9BW71 556 aaPredicted RBP8.74□□□□□ -1.01
PTBP3-207ENST00000458258 CHIC2Q9UKJ5 165 aa8.74□□□□□ -1.01
PTBP3-207ENST00000458258 SIN3AQ96ST3 1273 aa8.74□□□□□ -1.01
PTBP3-207ENST00000458258 BIVM-ERCC5R4GMW8 1640 aa8.73□□□□□ -1.01
PTBP3-207ENST00000458258 ABCA10Q8WWZ4 1543 aa8.73□□□□□ -1.01
PTBP3-207ENST00000458258 FAM50AQ14320 339 aaKnown RBP8.73□□□□□ -1.01
PTBP3-207ENST00000458258 GAPVD1Q14C86 1478 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms