RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 DCAF8L2P0C7V8 631 aa17.72■□□□□ 0.43
TRIM44-201ENST00000299413 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
TRIM44-201ENST00000299413 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
TRIM44-201ENST00000299413 SHROOM4Q9ULL8 1493 aa16.08■□□□□ 0.16
TRIM44-201ENST00000299413 TTBK1Q5TCY1 1321 aaPredicted RBP16.01■□□□□ 0.15
TRIM44-201ENST00000299413 RANGAP1P46060 587 aaPredicted RBP15.84■□□□□ 0.13
TRIM44-201ENST00000299413 APLP2Q06481 763 aa15.73■□□□□ 0.11
TRIM44-201ENST00000299413 PELP1Q8IZL8 1130 aaKnown RBP15.68■□□□□ 0.1
TRIM44-201ENST00000299413 ATP1B4Q9UN42 357 aaPredicted RBP15.65■□□□□ 0.1
TRIM44-201ENST00000299413 FAM9AQ8IZU1 332 aaPredicted RBP15.64■□□□□ 0.09
TRIM44-201ENST00000299413 CHIC1Q5VXU3 224 aa15.42■□□□□ 0.06
TRIM44-201ENST00000299413 ERICH6Q7L0X2 663 aa15.4■□□□□ 0.06
TRIM44-201ENST00000299413 PCGF6Q9BYE7 350 aa15.32■□□□□ 0.04
TRIM44-201ENST00000299413 MYT1LQ9UL68 1186 aa15.31■□□□□ 0.04
TRIM44-201ENST00000299413 MYT1Q01538 1121 aa15.12■□□□□ 0.01
TRIM44-201ENST00000299413 POLR3GLQ9BT43 218 aa15.11■□□□□ 0.01
TRIM44-201ENST00000299413 CNGB1Q14028 1251 aaPredicted RBP15.09■□□□□ 0.01
TRIM44-201ENST00000299413 YTHDC1Q96MU7 727 aaKnown RBP15.09■□□□□ 0.01
TRIM44-201ENST00000299413 UBTFP17480 764 aaKnown RBP15.02□□□□□ -0.01
TRIM44-201ENST00000299413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
TRIM44-201ENST00000299413 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
TRIM44-201ENST00000299413 SLC4A1APQ9BWU0 796 aaKnown RBP15□□□□□ -0.01
TRIM44-201ENST00000299413 PPARGC1BQ86YN6 1023 aaKnown RBP15□□□□□ -0.01
TRIM44-201ENST00000299413 CCER1Q8TC90 406 aaPredicted RBP15□□□□□ -0.01
TRIM44-201ENST00000299413 NEFLP07196 543 aa14.89□□□□□ -0.03
TRIM44-201ENST00000299413 NISCHQ9Y2I1 1504 aa14.88□□□□□ -0.03
TRIM44-201ENST00000299413 ITGAEP38570 1179 aa14.87□□□□□ -0.03
TRIM44-201ENST00000299413 TRIM41Q8WV44 630 aa14.81□□□□□ -0.04
TRIM44-201ENST00000299413 CENPBP07199 599 aaPredicted RBP14.79□□□□□ -0.04
TRIM44-201ENST00000299413 DAXXQ9UER7 740 aaPredicted RBP14.77□□□□□ -0.04
TRIM44-201ENST00000299413 BCL11AQ9H165 835 aa14.68□□□□□ -0.06
TRIM44-201ENST00000299413 SLC24A1O60721 1099 aa14.64□□□□□ -0.07
TRIM44-201ENST00000299413 PLPPR3Q6T4P5 718 aa14.61□□□□□ -0.07
TRIM44-201ENST00000299413 BCANQ96GW7 911 aa14.5□□□□□ -0.09
TRIM44-201ENST00000299413 CLSPNQ9HAW4 1339 aa14.49□□□□□ -0.09
TRIM44-201ENST00000299413 ZNF316A6NFI3 1004 aaPredicted RBP14.43□□□□□ -0.1
TRIM44-201ENST00000299413 ZEB1P37275 1124 aaPredicted RBP14.4□□□□□ -0.1
TRIM44-201ENST00000299413 FBLN2P98095 1184 aa14.36□□□□□ -0.11
TRIM44-201ENST00000299413 ZNF326Q5BKZ1 582 aaKnown RBP14.33□□□□□ -0.12
TRIM44-201ENST00000299413 FAM50AQ14320 339 aaKnown RBP14.27□□□□□ -0.13
TRIM44-201ENST00000299413 TRIM52Q96A61 297 aa14.25□□□□□ -0.13
TRIM44-201ENST00000299413 ARID3CA6NKF2 412 aa14.24□□□□□ -0.13
TRIM44-201ENST00000299413 A0A0G2JS52 829 aa14.24□□□□□ -0.13
TRIM44-201ENST00000299413 ZBTB47Q9UFB7 747 aaPredicted RBP14.19□□□□□ -0.14
TRIM44-201ENST00000299413 NEUROD1Q13562 356 aa14.19□□□□□ -0.14
TRIM44-201ENST00000299413 PLEKHG5O94827 1062 aa14.16□□□□□ -0.14
TRIM44-201ENST00000299413 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.14
TRIM44-201ENST00000299413 RTL5Q5HYW3 569 aaPredicted RBP14.14□□□□□ -0.15
TRIM44-201ENST00000299413 CANXP27824 592 aaKnown RBP14.12□□□□□ -0.15
TRIM44-201ENST00000299413 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
TRIM44-201ENST00000299413 SENP3Q9H4L4 574 aaPredicted RBP14.1□□□□□ -0.15
TRIM44-201ENST00000299413 LOC105371045A0A1W2PR82 267 aa14.07□□□□□ -0.16
TRIM44-201ENST00000299413 ESF1Q9H501 851 aaKnown RBP14.06□□□□□ -0.16
TRIM44-201ENST00000299413 STAG3Q9UJ98 1225 aa13.98□□□□□ -0.17
TRIM44-201ENST00000299413 TRIM26Q12899 539 aaPredicted RBP13.96□□□□□ -0.18
TRIM44-201ENST00000299413 NEFMP07197 916 aa13.94□□□□□ -0.18
TRIM44-201ENST00000299413 CHGAP10645 457 aaKnown RBP13.94□□□□□ -0.18
TRIM44-201ENST00000299413 ZNF777Q9ULD5 760 aaPredicted RBP13.93□□□□□ -0.18
TRIM44-201ENST00000299413 HRCP23327 699 aa13.93□□□□□ -0.18
TRIM44-201ENST00000299413 P3H3Q8IVL6 736 aa13.92□□□□□ -0.18
TRIM44-201ENST00000299413 ZBTB7CA1YPR0 619 aa13.92□□□□□ -0.18
TRIM44-201ENST00000299413 TULP1O00294 542 aaPredicted RBP13.85□□□□□ -0.19
TRIM44-201ENST00000299413 NPM2Q86SE8 214 aaKnown RBP13.84□□□□□ -0.19
TRIM44-201ENST00000299413 ABCC9O60706 1549 aa13.84□□□□□ -0.19
TRIM44-201ENST00000299413 C14orf37Q86TY3 774 aa13.78□□□□□ -0.2
TRIM44-201ENST00000299413 ANP32CO43423 234 aa13.77□□□□□ -0.21
TRIM44-201ENST00000299413 DIEXFQ68CQ4 756 aaKnown RBP13.75□□□□□ -0.21
TRIM44-201ENST00000299413 HSP90AA1P07900 732 aaKnown RBP13.74□□□□□ -0.21
TRIM44-201ENST00000299413 ARXQ96QS3 562 aa13.73□□□□□ -0.21
TRIM44-201ENST00000299413 NCBP3Q53F19 620 aaKnown RBP13.71□□□□□ -0.21
TRIM44-201ENST00000299413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.7□□□□□ -0.222e-7■■■■□ 24.2
TRIM44-201ENST00000299413 SALL2Q9Y467 1007 aaPredicted RBP13.7□□□□□ -0.22
TRIM44-201ENST00000299413 HAP1P54257 671 aaPredicted RBP13.67□□□□□ -0.22
TRIM44-201ENST00000299413 CDK11AQ9UQ88 783 aaPredicted RBP13.66□□□□□ -0.22
TRIM44-201ENST00000299413 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRIM44-201ENST00000299413 TAOK2Q9UL54 1235 aa13.61□□□□□ -0.23
TRIM44-201ENST00000299413 NPHP1O15259 732 aa13.6□□□□□ -0.23
TRIM44-201ENST00000299413 ARID4BQ4LE39 1312 aaPredicted RBP13.6□□□□□ -0.23
TRIM44-201ENST00000299413 TPRNQ4KMQ1 711 aa13.59□□□□□ -0.23
TRIM44-201ENST00000299413 CDK11BP21127 795 aaKnown RBP13.58□□□□□ -0.24
TRIM44-201ENST00000299413 EIF5BO60841 1220 aaKnown RBP13.53□□□□□ -0.24
TRIM44-201ENST00000299413 ANP32BQ92688 251 aaKnown RBP13.53□□□□□ -0.24
TRIM44-201ENST00000299413 ANP32AP39687 249 aaKnown RBP13.52□□□□□ -0.25
TRIM44-201ENST00000299413 LMOD2Q6P5Q4 547 aa13.5□□□□□ -0.25
TRIM44-201ENST00000299413 KDM2AQ9Y2K7 1162 aa13.49□□□□□ -0.25
TRIM44-201ENST00000299413 GTF3C3Q9Y5Q9 886 aa13.48□□□□□ -0.25
TRIM44-201ENST00000299413 PPP1R15AO75807 674 aaPredicted RBP13.47□□□□□ -0.25
TRIM44-201ENST00000299413 SENP3-EIF4A1A0A087X0R7 540 aa13.47□□□□□ -0.25
TRIM44-201ENST00000299413 CHIC2Q9UKJ5 165 aa13.46□□□□□ -0.26
TRIM44-201ENST00000299413 FAM9BQ8IZU0 186 aa13.45□□□□□ -0.26
TRIM44-201ENST00000299413 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
TRIM44-201ENST00000299413 NBR1Q14596 966 aa13.41□□□□□ -0.26
TRIM44-201ENST00000299413 CLSTN1O94985 981 aa13.4□□□□□ -0.26
TRIM44-201ENST00000299413 UPF2Q9HAU5 1272 aaKnown RBP13.39□□□□□ -0.27
TRIM44-201ENST00000299413 PPM1GO15355 546 aaPredicted RBP13.38□□□□□ -0.27
TRIM44-201ENST00000299413 KCNH8Q96L42 1107 aa13.38□□□□□ -0.27
TRIM44-201ENST00000299413 MYH16Q9H6N6 1097 aa13.35□□□□□ -0.27
TRIM44-201ENST00000299413 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
TRIM44-201ENST00000299413 TMC1Q8TDI8 760 aa13.33□□□□□ -0.27
TRIM44-201ENST00000299413 WDR43Q15061 677 aaKnown RBP eCLIP13.33□□□□□ -0.282e-7■■■■□ 26.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms