RNA–Protein interactions for RNA: ENST00000442034.5

RAB3GAP1-203, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-203ENST00000442034 NISCHQ9Y2I1 1504 aa17.42■□□□□ 0.38
RAB3GAP1-203ENST00000442034 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
RAB3GAP1-203ENST00000442034 DCAF8L2P0C7V8 631 aa15.69■□□□□ 0.1
RAB3GAP1-203ENST00000442034 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
RAB3GAP1-203ENST00000442034 PCGF6Q9BYE7 350 aa14.97□□□□□ -0.01
RAB3GAP1-203ENST00000442034 CHIC1Q5VXU3 224 aa14.86□□□□□ -0.03
RAB3GAP1-203ENST00000442034 HRCP23327 699 aa14.81□□□□□ -0.04
RAB3GAP1-203ENST00000442034 ZCCHC6Q5VYS8 1495 aaKnown RBP14.64□□□□□ -0.07
RAB3GAP1-203ENST00000442034 ZEB1P37275 1124 aaPredicted RBP14.61□□□□□ -0.07
RAB3GAP1-203ENST00000442034 TRIM41Q8WV44 630 aa14.61□□□□□ -0.07
RAB3GAP1-203ENST00000442034 EHMT2Q96KQ7 1210 aa14.6□□□□□ -0.07
RAB3GAP1-203ENST00000442034 FAM9AQ8IZU1 332 aaPredicted RBP14.59□□□□□ -0.07
RAB3GAP1-203ENST00000442034 TRIM26Q12899 539 aaPredicted RBP14.57□□□□□ -0.08
RAB3GAP1-203ENST00000442034 LOC105371045A0A1W2PR82 267 aa14.55□□□□□ -0.08
RAB3GAP1-203ENST00000442034 CCDC180Q9P1Z9 1646 aa14.48□□□□□ -0.09
RAB3GAP1-203ENST00000442034 PPARGC1BQ86YN6 1023 aaKnown RBP14.41□□□□□ -0.1
RAB3GAP1-203ENST00000442034 MYO15BQ96JP2 1530 aa14.29□□□□□ -0.12
RAB3GAP1-203ENST00000442034 DCAF1Q9Y4B6 1507 aa14.28□□□□□ -0.12
RAB3GAP1-203ENST00000442034 CCER1Q8TC90 406 aaPredicted RBP14.27□□□□□ -0.13
RAB3GAP1-203ENST00000442034 PELP1Q8IZL8 1130 aaKnown RBP14.24□□□□□ -0.13
RAB3GAP1-203ENST00000442034 TTBK1Q5TCY1 1321 aaPredicted RBP14.18□□□□□ -0.14
RAB3GAP1-203ENST00000442034 CENPBP07199 599 aaPredicted RBP14.16□□□□□ -0.14
RAB3GAP1-203ENST00000442034 APLP2Q06481 763 aa14.15□□□□□ -0.14
RAB3GAP1-203ENST00000442034 UBTFP17480 764 aaKnown RBP14.09□□□□□ -0.15
RAB3GAP1-203ENST00000442034 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
RAB3GAP1-203ENST00000442034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.17
RAB3GAP1-203ENST00000442034 RSF1Q96T23 1441 aaPredicted RBP13.94□□□□□ -0.18
RAB3GAP1-203ENST00000442034 ABCC9O60706 1549 aa13.93□□□□□ -0.18
RAB3GAP1-203ENST00000442034 RANGAP1P46060 587 aaPredicted RBP13.86□□□□□ -0.19
RAB3GAP1-203ENST00000442034 DIEXFQ68CQ4 756 aaKnown RBP13.86□□□□□ -0.19
RAB3GAP1-203ENST00000442034 YTHDC1Q96MU7 727 aaKnown RBP13.8□□□□□ -0.2
RAB3GAP1-203ENST00000442034 MYT1Q01538 1121 aa13.76□□□□□ -0.21
RAB3GAP1-203ENST00000442034 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
RAB3GAP1-203ENST00000442034 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
RAB3GAP1-203ENST00000442034 CSRNP3Q8WYN3 585 aa13.72□□□□□ -0.21
RAB3GAP1-203ENST00000442034 ACIN1Q9UKV3 1341 aaKnown RBP13.71□□□□□ -0.21
RAB3GAP1-203ENST00000442034 GTF3C3Q9Y5Q9 886 aa13.66□□□□□ -0.22
RAB3GAP1-203ENST00000442034 ZNF316A6NFI3 1004 aaPredicted RBP13.66□□□□□ -0.22
RAB3GAP1-203ENST00000442034 NACADO15069 1562 aa13.66□□□□□ -0.22
RAB3GAP1-203ENST00000442034 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
RAB3GAP1-203ENST00000442034 SCAF1Q9H7N4 1312 aaKnown RBP13.62□□□□□ -0.23
RAB3GAP1-203ENST00000442034 CECR2Q9BXF3 1484 aa13.6□□□□□ -0.23
RAB3GAP1-203ENST00000442034 NEUROD1Q13562 356 aa13.53□□□□□ -0.24
RAB3GAP1-203ENST00000442034 EEA1Q15075 1411 aa13.53□□□□□ -0.24
RAB3GAP1-203ENST00000442034 ATP1B4Q9UN42 357 aaPredicted RBP13.52□□□□□ -0.25
RAB3GAP1-203ENST00000442034 MROH2BQ7Z745 1585 aa13.52□□□□□ -0.25
RAB3GAP1-203ENST00000442034 CEP162Q5TB80 1403 aa13.51□□□□□ -0.25
RAB3GAP1-203ENST00000442034 BAZ1AQ9NRL2 1556 aaPredicted RBP13.5□□□□□ -0.25
RAB3GAP1-203ENST00000442034 ITGAEP38570 1179 aa13.49□□□□□ -0.25
RAB3GAP1-203ENST00000442034 TNIKQ9UKE5 1360 aa13.48□□□□□ -0.25
RAB3GAP1-203ENST00000442034 NEFLP07196 543 aa13.44□□□□□ -0.26
RAB3GAP1-203ENST00000442034 GOLGA3Q08378 1498 aa13.42□□□□□ -0.26
RAB3GAP1-203ENST00000442034 CLIP1P30622 1438 aa13.38□□□□□ -0.27
RAB3GAP1-203ENST00000442034 WIZO95785 1651 aa13.37□□□□□ -0.27
RAB3GAP1-203ENST00000442034 WRNQ14191 1432 aaPredicted RBP eCLIP13.36□□□□□ -0.27
RAB3GAP1-203ENST00000442034 SOGA1O94964 1423 aa13.34□□□□□ -0.27
RAB3GAP1-203ENST00000442034 CCDC88BA6NC98 1476 aa13.33□□□□□ -0.28
RAB3GAP1-203ENST00000442034 MIER1Q8N108 512 aa13.32□□□□□ -0.28
RAB3GAP1-203ENST00000442034 CEP164Q9UPV0 1460 aa13.31□□□□□ -0.28
RAB3GAP1-203ENST00000442034 ABCC8Q09428 1581 aa13.3□□□□□ -0.28
RAB3GAP1-203ENST00000442034 CLSPNQ9HAW4 1339 aa13.29□□□□□ -0.28
RAB3GAP1-203ENST00000442034 TOP2AP11388 1531 aaKnown RBP13.28□□□□□ -0.28
RAB3GAP1-203ENST00000442034 FAM50AQ14320 339 aaKnown RBP13.28□□□□□ -0.28
RAB3GAP1-203ENST00000442034 ERICH6Q7L0X2 663 aa13.24□□□□□ -0.29
RAB3GAP1-203ENST00000442034 VPS8Q8N3P4 1428 aa13.17□□□□□ -0.3
RAB3GAP1-203ENST00000442034 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
RAB3GAP1-203ENST00000442034 ANP32CO43423 234 aa13.15□□□□□ -0.3
RAB3GAP1-203ENST00000442034 SMARCA4P51532 1647 aa13.15□□□□□ -0.3
RAB3GAP1-203ENST00000442034 BCANQ96GW7 911 aa13.1□□□□□ -0.31
RAB3GAP1-203ENST00000442034 RUSC2Q8N2Y8 1516 aa13.1□□□□□ -0.31
RAB3GAP1-203ENST00000442034 SMARCA2P51531 1590 aa13.09□□□□□ -0.31
RAB3GAP1-203ENST00000442034 P3H3Q8IVL6 736 aa13.09□□□□□ -0.31
RAB3GAP1-203ENST00000442034 KIF27Q86VH2 1401 aa13.07□□□□□ -0.32
RAB3GAP1-203ENST00000442034 DDX10Q13206 875 aaKnown RBP13.05□□□□□ -0.32
RAB3GAP1-203ENST00000442034 TRIM52Q96A61 297 aa13.01□□□□□ -0.33
RAB3GAP1-203ENST00000442034 CCNB3Q8WWL7 1395 aa13□□□□□ -0.33
RAB3GAP1-203ENST00000442034 FKBP8Q14318 412 aa13□□□□□ -0.33
RAB3GAP1-203ENST00000442034 TONSLQ96HA7 1378 aa12.99□□□□□ -0.33
RAB3GAP1-203ENST00000442034 RAPGEF2Q9Y4G8 1499 aa12.99□□□□□ -0.33
RAB3GAP1-203ENST00000442034 KANK4Q5T7N3 995 aaPredicted RBP12.97□□□□□ -0.33
RAB3GAP1-203ENST00000442034 ATAD2BQ9ULI0 1458 aa12.95□□□□□ -0.34
RAB3GAP1-203ENST00000442034 FBLN2P98095 1184 aa12.94□□□□□ -0.34
RAB3GAP1-203ENST00000442034 SUPT16HQ9Y5B9 1047 aaKnown RBP12.94□□□□□ -0.34
RAB3GAP1-203ENST00000442034 POLR3GLQ9BT43 218 aa12.94□□□□□ -0.34
RAB3GAP1-203ENST00000442034 CDK11AQ9UQ88 783 aaPredicted RBP12.93□□□□□ -0.34
RAB3GAP1-203ENST00000442034 DHX57Q6P158 1386 aaKnown RBP12.91□□□□□ -0.34
RAB3GAP1-203ENST00000442034 KIF21BO75037 1637 aa12.89□□□□□ -0.35
RAB3GAP1-203ENST00000442034 TIMELESSQ9UNS1 1208 aa12.89□□□□□ -0.35
RAB3GAP1-203ENST00000442034 MTUS2Q5JR59 1369 aa12.88□□□□□ -0.35
RAB3GAP1-203ENST00000442034 FHAD1B1AJZ9 1412 aa12.87□□□□□ -0.35
RAB3GAP1-203ENST00000442034 HIRIP3Q9BW71 556 aaPredicted RBP12.87□□□□□ -0.35
RAB3GAP1-203ENST00000442034 HNRNPUQ00839 825 aaKnown RBP eCLIP12.86□□□□□ -0.35
RAB3GAP1-203ENST00000442034 SIN3AQ96ST3 1273 aa12.86□□□□□ -0.35
RAB3GAP1-203ENST00000442034 CNGB1Q14028 1251 aaPredicted RBP12.86□□□□□ -0.35
RAB3GAP1-203ENST00000442034 CARMIL1Q5VZK9 1371 aa12.86□□□□□ -0.35
RAB3GAP1-203ENST00000442034 SETD5Q9C0A6 1442 aa12.86□□□□□ -0.35
RAB3GAP1-203ENST00000442034 CUX2O14529 1486 aa12.85□□□□□ -0.35
RAB3GAP1-203ENST00000442034 RAB3GAP2Q9H2M9 1393 aa12.84□□□□□ -0.35
RAB3GAP1-203ENST00000442034 SYNJ1O43426 1573 aa12.82□□□□□ -0.36
RAB3GAP1-203ENST00000442034 MYT1LQ9UL68 1186 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms