RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 NISCHQ9Y2I1 1504 aa19.65■□□□□ 0.74
ARFGEF1-203ENST00000518230 CCDC180Q9P1Z9 1646 aa16.8■□□□□ 0.28
ARFGEF1-203ENST00000518230 SHROOM4Q9ULL8 1493 aa16.67■□□□□ 0.26
ARFGEF1-203ENST00000518230 SUPT5HO00267 1087 aaKnown RBP16.56■□□□□ 0.24
ARFGEF1-203ENST00000518230 ZCCHC6Q5VYS8 1495 aaKnown RBP16.56■□□□□ 0.24
ARFGEF1-203ENST00000518230 HRCP23327 699 aa16.47■□□□□ 0.23
ARFGEF1-203ENST00000518230 DCAF8L2P0C7V8 631 aa16.29■□□□□ 0.2
ARFGEF1-203ENST00000518230 PCGF6Q9BYE7 350 aa16.28■□□□□ 0.2
ARFGEF1-203ENST00000518230 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.2
ARFGEF1-203ENST00000518230 PPARGC1BQ86YN6 1023 aaKnown RBP16.25■□□□□ 0.19
ARFGEF1-203ENST00000518230 CHIC1Q5VXU3 224 aa16.2■□□□□ 0.18
ARFGEF1-203ENST00000518230 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
ARFGEF1-203ENST00000518230 LOC105371045A0A1W2PR82 267 aa15.89■□□□□ 0.13
ARFGEF1-203ENST00000518230 ABCC9O60706 1549 aa15.75■□□□□ 0.11
ARFGEF1-203ENST00000518230 TRIM26Q12899 539 aaPredicted RBP15.71■□□□□ 0.11
ARFGEF1-203ENST00000518230 SCRIBQ14160 1630 aa15.66■□□□□ 0.1
ARFGEF1-203ENST00000518230 NACADO15069 1562 aa15.62■□□□□ 0.09
ARFGEF1-203ENST00000518230 PELP1Q8IZL8 1130 aaKnown RBP15.57■□□□□ 0.08
ARFGEF1-203ENST00000518230 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
ARFGEF1-203ENST00000518230 ZEB1P37275 1124 aaPredicted RBP15.47■□□□□ 0.07
ARFGEF1-203ENST00000518230 RSF1Q96T23 1441 aaPredicted RBP15.45■□□□□ 0.06
ARFGEF1-203ENST00000518230 RB1CC1Q8TDY2 1594 aa15.39■□□□□ 0.05
ARFGEF1-203ENST00000518230 FAM9AQ8IZU1 332 aaPredicted RBP15.35■□□□□ 0.05
ARFGEF1-203ENST00000518230 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
ARFGEF1-203ENST00000518230 CECR2Q9BXF3 1484 aa15.33■□□□□ 0.04
ARFGEF1-203ENST00000518230 TRIM41Q8WV44 630 aa15.28■□□□□ 0.04
ARFGEF1-203ENST00000518230 MROH2BQ7Z745 1585 aa15.25■□□□□ 0.03
ARFGEF1-203ENST00000518230 NEUROD1Q13562 356 aa15.19■□□□□ 0.02
ARFGEF1-203ENST00000518230 ACIN1Q9UKV3 1341 aaKnown RBP15.18■□□□□ 0.02
ARFGEF1-203ENST00000518230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.15■□□□□ 0.02
ARFGEF1-203ENST00000518230 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
ARFGEF1-203ENST00000518230 WIZO95785 1651 aa15.12■□□□□ 0.01
ARFGEF1-203ENST00000518230 GTF3C3Q9Y5Q9 886 aa15.09■□□□□ 0.01
ARFGEF1-203ENST00000518230 BAZ1AQ9NRL2 1556 aaPredicted RBP15.09■□□□□ 0.01
ARFGEF1-203ENST00000518230 CCER1Q8TC90 406 aaPredicted RBP15.07■□□□□ 0
ARFGEF1-203ENST00000518230 PABPN1Q86U42 306 aaKnown RBP eCLIP15.03■□□□□ -0
ARFGEF1-203ENST00000518230 DIEXFQ68CQ4 756 aaKnown RBP15.01□□□□□ -0.01
ARFGEF1-203ENST00000518230 BICRAQ9NZM4 1560 aa15□□□□□ -0.01
ARFGEF1-203ENST00000518230 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
ARFGEF1-203ENST00000518230 CENPBP07199 599 aaPredicted RBP14.96□□□□□ -0.01
ARFGEF1-203ENST00000518230 TTBK1Q5TCY1 1321 aaPredicted RBP14.93□□□□□ -0.02
ARFGEF1-203ENST00000518230 TOP2AP11388 1531 aaKnown RBP14.9□□□□□ -0.02
ARFGEF1-203ENST00000518230 MYT1Q01538 1121 aa14.87□□□□□ -0.03
ARFGEF1-203ENST00000518230 CCDC88BA6NC98 1476 aa14.85□□□□□ -0.03
ARFGEF1-203ENST00000518230 YTHDC1Q96MU7 727 aaKnown RBP14.83□□□□□ -0.04
ARFGEF1-203ENST00000518230 EIF4G1Q04637 1599 aaKnown RBP14.83□□□□□ -0.04
ARFGEF1-203ENST00000518230 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
ARFGEF1-203ENST00000518230 PEG3Q9GZU2 1588 aa14.76□□□□□ -0.05
ARFGEF1-203ENST00000518230 ZNF316A6NFI3 1004 aaPredicted RBP14.74□□□□□ -0.05
ARFGEF1-203ENST00000518230 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
ARFGEF1-203ENST00000518230 ABCC8Q09428 1581 aa14.68□□□□□ -0.06
ARFGEF1-203ENST00000518230 MIER1Q8N108 512 aa14.68□□□□□ -0.06
ARFGEF1-203ENST00000518230 BAZ1BQ9UIG0 1483 aaKnown RBP14.61□□□□□ -0.07
ARFGEF1-203ENST00000518230 WRNQ14191 1432 aaPredicted RBP eCLIP14.59□□□□□ -0.07
ARFGEF1-203ENST00000518230 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
ARFGEF1-203ENST00000518230 HNRNPUL2Q1KMD3 747 aaKnown RBP14.54□□□□□ -0.08
ARFGEF1-203ENST00000518230 UBTFP17480 764 aaKnown RBP14.53□□□□□ -0.08
ARFGEF1-203ENST00000518230 SOGA1O94964 1423 aa14.53□□□□□ -0.08
ARFGEF1-203ENST00000518230 TNIKQ9UKE5 1360 aa14.48□□□□□ -0.09
ARFGEF1-203ENST00000518230 NCAPD3P42695 1498 aa14.48□□□□□ -0.09
ARFGEF1-203ENST00000518230 RUSC2Q8N2Y8 1516 aa14.46□□□□□ -0.09
ARFGEF1-203ENST00000518230 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
ARFGEF1-203ENST00000518230 SYNJ1O43426 1573 aa14.42□□□□□ -0.1
ARFGEF1-203ENST00000518230 HMGXB3Q12766 1538 aa14.42□□□□□ -0.1
ARFGEF1-203ENST00000518230 EEA1Q15075 1411 aa14.42□□□□□ -0.1
ARFGEF1-203ENST00000518230 SUPT16HQ9Y5B9 1047 aaKnown RBP14.37□□□□□ -0.11
ARFGEF1-203ENST00000518230 RANGAP1P46060 587 aaPredicted RBP14.3□□□□□ -0.12
ARFGEF1-203ENST00000518230 GOLGA3Q08378 1498 aa14.3□□□□□ -0.12
ARFGEF1-203ENST00000518230 TOP2BQ02880 1626 aa14.28□□□□□ -0.12
ARFGEF1-203ENST00000518230 CFTRP13569 1480 aa14.28□□□□□ -0.12
ARFGEF1-203ENST00000518230 TSHZ2Q9NRE2 1034 aa14.28□□□□□ -0.12
ARFGEF1-203ENST00000518230 APLP2Q06481 763 aa14.24□□□□□ -0.13
ARFGEF1-203ENST00000518230 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
ARFGEF1-203ENST00000518230 BIVM-ERCC5R4GMW8 1640 aa14.23□□□□□ -0.13
ARFGEF1-203ENST00000518230 CLIP1P30622 1438 aa14.23□□□□□ -0.13
ARFGEF1-203ENST00000518230 KIF21BO75037 1637 aa14.21□□□□□ -0.13
ARFGEF1-203ENST00000518230 ANP32EQ9BTT0 268 aa14.21□□□□□ -0.13
ARFGEF1-203ENST00000518230 CUX1P39880 1505 aa14.21□□□□□ -0.13
ARFGEF1-203ENST00000518230 CC2D2AQ9P2K1 1620 aa14.2□□□□□ -0.14
ARFGEF1-203ENST00000518230 CLSPNQ9HAW4 1339 aa14.19□□□□□ -0.14
ARFGEF1-203ENST00000518230 RAPGEF2Q9Y4G8 1499 aa14.18□□□□□ -0.14
ARFGEF1-203ENST00000518230 KCNH8Q96L42 1107 aa14.18□□□□□ -0.14
ARFGEF1-203ENST00000518230 VPS8Q8N3P4 1428 aa14.17□□□□□ -0.14
ARFGEF1-203ENST00000518230 CADPSQ9ULU8 1353 aa14.17□□□□□ -0.14
ARFGEF1-203ENST00000518230 BCANQ96GW7 911 aa14.16□□□□□ -0.14
ARFGEF1-203ENST00000518230 DHX57Q6P158 1386 aaKnown RBP14.16□□□□□ -0.14
ARFGEF1-203ENST00000518230 BCL11AQ9H165 835 aa14.1□□□□□ -0.15
ARFGEF1-203ENST00000518230 PRXQ9BXM0 1461 aa14.1□□□□□ -0.15
ARFGEF1-203ENST00000518230 KIF27Q86VH2 1401 aa14.08□□□□□ -0.16
ARFGEF1-203ENST00000518230 PRDM2Q13029 1718 aa14.08□□□□□ -0.16
ARFGEF1-203ENST00000518230 KANK4Q5T7N3 995 aaPredicted RBP14.06□□□□□ -0.16
ARFGEF1-203ENST00000518230 FKBP8Q14318 412 aa14.05□□□□□ -0.16
ARFGEF1-203ENST00000518230 ERICH3Q5RHP9 1530 aa14.05□□□□□ -0.16
ARFGEF1-203ENST00000518230 ITGAEP38570 1179 aa14.03□□□□□ -0.16
ARFGEF1-203ENST00000518230 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
ARFGEF1-203ENST00000518230 IGF1RP08069 1367 aa13.99□□□□□ -0.17
ARFGEF1-203ENST00000518230 CUX2O14529 1486 aa13.98□□□□□ -0.17
ARFGEF1-203ENST00000518230 FGD5Q6ZNL6 1462 aa13.98□□□□□ -0.17
ARFGEF1-203ENST00000518230 NESP48681 1621 aa13.98□□□□□ -0.17
ARFGEF1-203ENST00000518230 DDX10Q13206 875 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms