Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 AGAP1-203ENST00000402604 563 ntTSL 49.09□□□□□ -0.952e-6■■■□□ 16.7
EWSR1Q01844 PKP3-210ENST00000533249 1111 ntTSL 316.99■□□□□ 0.317e-6■■■□□ 16.7
EWSR1Q01844 PKP3-206ENST00000528036 940 ntTSL 216.92■□□□□ 0.37e-6■■■□□ 16.7
EWSR1Q01844 PKP3-205ENST00000527442 847 ntTSL 316.21■□□□□ 0.197e-6■■■□□ 16.7
EWSR1Q01844 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.137e-6■■■□□ 16.7
EWSR1Q01844 PKP3-211ENST00000534401 756 ntTSL 315.58■□□□□ 0.087e-6■■■□□ 16.7
EWSR1Q01844 PKP3-208ENST00000531857 687 ntTSL 412.96□□□□□ -0.337e-6■■■□□ 16.7
EWSR1Q01844 PKP3-209ENST00000533069 590 ntTSL 212.52□□□□□ -0.417e-6■■■□□ 16.7
EWSR1Q01844 MATR3-213ENST00000508689 561 ntTSL 412.05□□□□□ -0.486e-9■■■□□ 16.7
EWSR1Q01844 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.57■□□□□ 0.241e-7■■■□□ 16.7
EWSR1Q01844 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -01e-7■■■□□ 16.7
EWSR1Q01844 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.46■□□□□ 0.712e-7■■■□□ 16.6
EWSR1Q01844 TRIM28-204ENST00000594806 861 ntTSL 519.2■□□□□ 0.662e-7■■■□□ 16.6
EWSR1Q01844 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.522e-7■■■□□ 16.6
EWSR1Q01844 TRIM28-203ENST00000593582 533 ntTSL 311.18□□□□□ -0.622e-7■■■□□ 16.6
EWSR1Q01844 MED15-218ENST00000451058 418 ntTSL 314.01□□□□□ -0.172e-6■■■□□ 16.6
EWSR1Q01844 MED15-221ENST00000473028 556 ntTSL 412.83□□□□□ -0.362e-6■■■□□ 16.6
EWSR1Q01844 MED15-216ENST00000445189 596 ntTSL 412.22□□□□□ -0.452e-6■■■□□ 16.6
EWSR1Q01844 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.132e-6■■■□□ 16.6
EWSR1Q01844 DHRS3-203ENST00000482265 1036 ntTSL 311.35□□□□□ -0.592e-6■■■□□ 16.6
EWSR1Q01844 DHRS3-202ENST00000464917 539 ntTSL 39.88□□□□□ -0.832e-6■■■□□ 16.6
EWSR1Q01844 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.26■□□□□ 0.357e-7■■■□□ 16.6
EWSR1Q01844 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.027e-7■■■□□ 16.6
EWSR1Q01844 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.1■□□□□ 0.338e-8■■■□□ 16.6
EWSR1Q01844 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.42■□□□□ 0.228e-8■■■□□ 16.6
EWSR1Q01844 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.1■□□□□ 0.178e-8■■■□□ 16.6
EWSR1Q01844 SREBF1-203ENST00000395751 4653 ntTSL 215.19■□□□□ 0.028e-8■■■□□ 16.6
EWSR1Q01844 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11.33□□□□□ -0.64e-6■■■□□ 16.6
EWSR1Q01844 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.2□□□□□ -0.628e-8■■■□□ 16.6
EWSR1Q01844 TMEM74B-202ENST00000429036 983 ntAPPRIS ALT2 TSL 312.25□□□□□ -0.456e-7■■■□□ 16.6
EWSR1Q01844 BCR-214ENST00000487679 231 ntTSL 1 (best)6.33□□□□□ -1.49e-7■■■□□ 16.6
EWSR1Q01844 EHBP1L1-208ENST00000533237 2267 ntTSL 521.4■■□□□ 1.021e-6■■■□□ 16.6
EWSR1Q01844 EHBP1L1-211ENST00000634639 1643 ntTSL 519.43■□□□□ 0.71e-6■■■□□ 16.6
EWSR1Q01844 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.691e-6■■■□□ 16.6
EWSR1Q01844 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.46□□□□□ -0.099e-12■■■□□ 16.6
EWSR1Q01844 PFKFB3-205ENST00000379789 4157 ntTSL 1 (best) BASIC9.45□□□□□ -0.99e-12■■■□□ 16.6
EWSR1Q01844 PFKFB3-218ENST00000639949 587 ntTSL 46.85□□□□□ -1.319e-12■■■□□ 16.6
EWSR1Q01844 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.267e-7■■■□□ 16.6
EWSR1Q01844 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.04■□□□□ 0.167e-7■■■□□ 16.6
EWSR1Q01844 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC10.06□□□□□ -0.83e-7■■■□□ 16.6
EWSR1Q01844 ARFGAP1-211ENST00000519531 1490 ntTSL 313.66□□□□□ -0.223e-7■■■□□ 16.5
EWSR1Q01844 INPP5E-202ENST00000635815 4311 nt12.8□□□□□ -0.363e-6■■■□□ 16.5
EWSR1Q01844 TMC6-217ENST00000590934 386 ntTSL 59.5□□□□□ -0.898e-8■■■□□ 16.5
EWSR1Q01844 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.57■■□□□ 1.523e-6■■■□□ 16.5
EWSR1Q01844 SLC25A10-207ENST00000574129 1523 ntTSL 524.2■■□□□ 1.463e-6■■■□□ 16.5
EWSR1Q01844 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.733e-6■■■□□ 16.5
EWSR1Q01844 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.41■□□□□ 0.223e-6■■■□□ 16.5
EWSR1Q01844 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.772e-6■■■□□ 16.5
EWSR1Q01844 NR2F6-202ENST00000596878 731 ntTSL 318.46■□□□□ 0.552e-6■■■□□ 16.5
EWSR1Q01844 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.062e-6■■■□□ 16.5
EWSR1Q01844 PTTG1IP-206ENST00000480234 398 ntTSL 315.05■□□□□ -05e-7■■■□□ 16.5
EWSR1Q01844 SEPT5-208ENST00000431124 920 ntTSL 511.75□□□□□ -0.532e-6■■■□□ 16.5
EWSR1Q01844 TCF25-206ENST00000562193 627 ntTSL 38.34□□□□□ -1.072e-7■■■□□ 16.5
EWSR1Q01844 AKT2-228ENST00000537834 1402 ntTSL 214.47□□□□□ -0.092e-6■■■□□ 16.5
EWSR1Q01844 AC004687.1-201ENST00000579003 1625 ntBASIC17.32■□□□□ 0.366e-19■■■□□ 16.5
EWSR1Q01844 TRIM65-202ENST00000540128 886 ntTSL 316.46■□□□□ 0.231e-6■■■□□ 16.5
EWSR1Q01844 TRIM65-204ENST00000543309 865 ntTSL 212.54□□□□□ -0.41e-6■■■□□ 16.5
EWSR1Q01844 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.421e-6■■■□□ 16.5
EWSR1Q01844 TRIM65-203ENST00000540812 385 ntTSL 212.1□□□□□ -0.471e-6■■■□□ 16.5
EWSR1Q01844 UVSSA-204ENST00000505716 549 ntTSL 38.34□□□□□ -1.076e-8■■■□□ 16.5
EWSR1Q01844 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.77■□□□□ 0.125e-7■■■□□ 16.5
EWSR1Q01844 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.15e-7■■■□□ 16.5
EWSR1Q01844 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.39■□□□□ 0.055e-7■■■□□ 16.5
EWSR1Q01844 ESRRA-205ENST00000468670 742 ntTSL 215.16■□□□□ 0.022e-7■■■□□ 16.4
EWSR1Q01844 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC9.19□□□□□ -0.944e-8■■■□□ 16.4
EWSR1Q01844 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.62■□□□□ 0.253e-6■■■□□ 16.4
EWSR1Q01844 UBE2I-215ENST00000567074 884 ntTSL 1 (best)14.7□□□□□ -0.063e-6■■■□□ 16.4
EWSR1Q01844 UBE2I-212ENST00000566159 2642 nt13.66□□□□□ -0.223e-6■■■□□ 16.4
EWSR1Q01844 UBE2I-214ENST00000566775 396 ntTSL 36.45□□□□□ -1.383e-6■■■□□ 16.4
EWSR1Q01844 ARFGAP1-214ENST00000520485 1548 ntTSL 217.86■□□□□ 0.452e-7■■■□□ 16.4
EWSR1Q01844 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.062e-7■■■□□ 16.4
EWSR1Q01844 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.89□□□□□ -0.192e-7■■■□□ 16.4
EWSR1Q01844 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.4□□□□□ -0.262e-7■■■□□ 16.4
EWSR1Q01844 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.322e-7■■■□□ 16.4
EWSR1Q01844 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.42e-7■■■□□ 16.4
EWSR1Q01844 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.3□□□□□ -0.442e-7■■■□□ 16.4
EWSR1Q01844 ARFGAP1-215ENST00000522403 995 ntTSL 511.93□□□□□ -0.52e-7■■■□□ 16.4
EWSR1Q01844 ARFGAP1-221ENST00000549047 1040 ntTSL 511.17□□□□□ -0.622e-7■■■□□ 16.4
EWSR1Q01844 ARFGAP1-218ENST00000523460 572 ntTSL 410.51□□□□□ -0.732e-7■■■□□ 16.4
EWSR1Q01844 ARFGAP1-206ENST00000518601 905 ntTSL 510.13□□□□□ -0.792e-7■■■□□ 16.4
EWSR1Q01844 MICALL2-210ENST00000482839 852 ntTSL 211.34□□□□□ -0.592e-6■■■□□ 16.4
EWSR1Q01844 GNB1-202ENST00000434686 684 ntTSL 37.86□□□□□ -1.154e-7■■■□□ 16.4
EWSR1Q01844 SEMA4C-206ENST00000482925 3776 ntTSL 211.83□□□□□ -0.515e-8■■■□□ 16.4
EWSR1Q01844 GATAD2A-210ENST00000457895 729 ntTSL 216.26■□□□□ 0.193e-6■■■□□ 16.4
EWSR1Q01844 GATAD2A-213ENST00000609040 1652 ntTSL 215.77■□□□□ 0.123e-6■■■□□ 16.4
EWSR1Q01844 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.023e-6■■■□□ 16.4
EWSR1Q01844 GATAD2A-204ENST00000417582 655 ntTSL 214.59□□□□□ -0.073e-6■■■□□ 16.4
EWSR1Q01844 CLPTM1L-211ENST00000511268 704 ntTSL 29.09□□□□□ -0.954e-8■■■□□ 16.4
EWSR1Q01844 CLPTM1L-205ENST00000505605 386 ntTSL 28.76□□□□□ -1.014e-8■■■□□ 16.4
EWSR1Q01844 CLPTM1L-206ENST00000505914 519 ntTSL 38.55□□□□□ -1.044e-8■■■□□ 16.4
EWSR1Q01844 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.223e-6■■■□□ 16.4
EWSR1Q01844 KMT5A-207ENST00000478781 725 ntTSL 520.84■□□□□ 0.936e-10■■■□□ 16.4
EWSR1Q01844 KMT5A-205ENST00000461103 1000 ntTSL 216.01■□□□□ 0.156e-10■■■□□ 16.4
EWSR1Q01844 KMT5A-206ENST00000462311 747 ntTSL 515.3■□□□□ 0.046e-10■■■□□ 16.4
EWSR1Q01844 AKT2-227ENST00000498350 562 ntTSL 411.62□□□□□ -0.552e-6■■■□□ 16.4
EWSR1Q01844 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.542e-8■■■□□ 16.3
EWSR1Q01844 ICAM5-203ENST00000586480 2599 ntTSL 1 (best)16.58■□□□□ 0.242e-8■■■□□ 16.3
EWSR1Q01844 TANGO2-219ENST00000471707 745 ntTSL 512.11□□□□□ -0.476e-7■■■□□ 16.3
EWSR1Q01844 SMG1P3-202ENST00000437413 589 ntTSL 416.49■□□□□ 0.237e-7■■■□□ 16.3
EWSR1Q01844 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.93□□□□□ -0.187e-7■■■□□ 16.3
Retrieved 100 of 7,101 protein–RNA pairs in 40.5 ms