RNA–Protein interactions for RNA: ENST00000511268.6

CLPTM1L-211, Transcript of CLPTM1 like, humanhuman

TSL 2

Gene CLPTM1L, Length 704 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-211ENST00000511268 NISCHQ9Y2I1 1504 aa29.37■■■□□ 2.29
CLPTM1L-211ENST00000511268 CCDC180Q9P1Z9 1646 aa26.13■■□□□ 1.77
CLPTM1L-211ENST00000511268 ABCC9O60706 1549 aa25.98■■□□□ 1.75
CLPTM1L-211ENST00000511268 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
CLPTM1L-211ENST00000511268 RB1CC1Q8TDY2 1594 aa24.79■■□□□ 1.56
CLPTM1L-211ENST00000511268 NACADO15069 1562 aa24.69■■□□□ 1.54
CLPTM1L-211ENST00000511268 MYO15BQ96JP2 1530 aa24.4■■□□□ 1.5
CLPTM1L-211ENST00000511268 ZCCHC6Q5VYS8 1495 aaKnown RBP24.36■■□□□ 1.49
CLPTM1L-211ENST00000511268 PABPN1Q86U42 306 aaKnown RBP eCLIP24.32■■□□□ 1.48
CLPTM1L-211ENST00000511268 UNC13AQ9UPW8 1703 aa24.24■■□□□ 1.47
CLPTM1L-211ENST00000511268 DCAF1Q9Y4B6 1507 aa24.22■■□□□ 1.47
CLPTM1L-211ENST00000511268 DNAJC5BQ9UF47 199 aa24.19■■□□□ 1.46
CLPTM1L-211ENST00000511268 BICRAQ9NZM4 1560 aa24.07■■□□□ 1.44
CLPTM1L-211ENST00000511268 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
CLPTM1L-211ENST00000511268 SHROOM4Q9ULL8 1493 aa23.67■■□□□ 1.38
CLPTM1L-211ENST00000511268 CC2D2AQ9P2K1 1620 aa23.44■■□□□ 1.34
CLPTM1L-211ENST00000511268 EIF4G1Q04637 1599 aaKnown RBP23.44■■□□□ 1.34
CLPTM1L-211ENST00000511268 CECR2Q9BXF3 1484 aa23.34■■□□□ 1.33
CLPTM1L-211ENST00000511268 NCAPD3P42695 1498 aa22.82■■□□□ 1.24
CLPTM1L-211ENST00000511268 SMARCA4P51532 1647 aa22.82■■□□□ 1.24
CLPTM1L-211ENST00000511268 ATAD2BQ9ULI0 1458 aa22.8■■□□□ 1.24
CLPTM1L-211ENST00000511268 BAZ1AQ9NRL2 1556 aaPredicted RBP22.75■■□□□ 1.23
CLPTM1L-211ENST00000511268 SMARCA2P51531 1590 aa22.72■■□□□ 1.23
CLPTM1L-211ENST00000511268 MROH2BQ7Z745 1585 aa22.66■■□□□ 1.22
CLPTM1L-211ENST00000511268 HMGXB3Q12766 1538 aa22.62■■□□□ 1.21
CLPTM1L-211ENST00000511268 BAZ1BQ9UIG0 1483 aaKnown RBP22.59■■□□□ 1.21
CLPTM1L-211ENST00000511268 PEG3Q9GZU2 1588 aa22.56■■□□□ 1.2
CLPTM1L-211ENST00000511268 NESP48681 1621 aa22.41■■□□□ 1.18
CLPTM1L-211ENST00000511268 WIZO95785 1651 aa22.4■■□□□ 1.18
CLPTM1L-211ENST00000511268 ERCC6Q03468 1493 aa22.39■■□□□ 1.17
CLPTM1L-211ENST00000511268 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
CLPTM1L-211ENST00000511268 LAMC3Q9Y6N6 1575 aa22.22■■□□□ 1.15
CLPTM1L-211ENST00000511268 CUX2O14529 1486 aa22.19■■□□□ 1.14
CLPTM1L-211ENST00000511268 CADPSQ9ULU8 1353 aa22.18■■□□□ 1.14
CLPTM1L-211ENST00000511268 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.13
CLPTM1L-211ENST00000511268 TOP2AP11388 1531 aaKnown RBP22.08■■□□□ 1.13
CLPTM1L-211ENST00000511268 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
CLPTM1L-211ENST00000511268 THOC2Q8NI27 1593 aaKnown RBP22.02■■□□□ 1.12
CLPTM1L-211ENST00000511268 DNAJC5Q9H3Z4 198 aa21.96■■□□□ 1.11
CLPTM1L-211ENST00000511268 CFTRP13569 1480 aa21.95■■□□□ 1.1
CLPTM1L-211ENST00000511268 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
CLPTM1L-211ENST00000511268 FANCD2Q9BXW9 1451 aa21.9■■□□□ 1.1
CLPTM1L-211ENST00000511268 MRC2Q9UBG0 1479 aa21.89■■□□□ 1.09
CLPTM1L-211ENST00000511268 CEP164Q9UPV0 1460 aa21.88■■□□□ 1.09
CLPTM1L-211ENST00000511268 AEBP2Q6ZN18 517 aaPredicted RBP21.83■■□□□ 1.09
CLPTM1L-211ENST00000511268 WDR62O43379 1518 aa21.8■■□□□ 1.08
CLPTM1L-211ENST00000511268 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.06
CLPTM1L-211ENST00000511268 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
CLPTM1L-211ENST00000511268 SUPT5HO00267 1087 aaKnown RBP21.68■■□□□ 1.06
CLPTM1L-211ENST00000511268 CHIC1Q5VXU3 224 aa21.53■■□□□ 1.04
CLPTM1L-211ENST00000511268 TOPBP1Q92547 1522 aa21.51■■□□□ 1.03
CLPTM1L-211ENST00000511268 ABCC8Q09428 1581 aa21.48■■□□□ 1.03
CLPTM1L-211ENST00000511268 IFT140Q96RY7 1462 aa21.43■■□□□ 1.02
CLPTM1L-211ENST00000511268 DNMBPQ6XZF7 1577 aa21.42■■□□□ 1.02
CLPTM1L-211ENST00000511268 ZNF608Q9ULD9 1512 aaPredicted RBP21.4■■□□□ 1.02
CLPTM1L-211ENST00000511268 OSCARQ8IYS5 282 aa21.36■■□□□ 1.01
CLPTM1L-211ENST00000511268 POLA1P09884 1462 aaPredicted RBP21.31■■□□□ 1
CLPTM1L-211ENST00000511268 AQRO60306 1485 aaKnown RBP eCLIP21.28■■□□□ 1
CLPTM1L-211ENST00000511268 SOGA1O94964 1423 aa21.28■■□□□ 1
CLPTM1L-211ENST00000511268 RAD54L2Q9Y4B4 1467 aa21.27■■□□□ 1
CLPTM1L-211ENST00000511268 TARBP1Q13395 1621 aaKnown RBP21.27■■□□□ 1
CLPTM1L-211ENST00000511268 CUX1P39880 1505 aa21.25■□□□□ 0.99
CLPTM1L-211ENST00000511268 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
CLPTM1L-211ENST00000511268 FGD5Q6ZNL6 1462 aa21.22■□□□□ 0.99
CLPTM1L-211ENST00000511268 TDRD9Q8NDG6 1382 aaKnown RBP21.22■□□□□ 0.99
CLPTM1L-211ENST00000511268 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
CLPTM1L-211ENST00000511268 FBLN2P98095 1184 aa21.15■□□□□ 0.98
CLPTM1L-211ENST00000511268 CHD1O14646 1710 aa21.04■□□□□ 0.96
CLPTM1L-211ENST00000511268 WRNQ14191 1432 aaPredicted RBP eCLIP21.03■□□□□ 0.96
CLPTM1L-211ENST00000511268 CHMP7Q8WUX9 453 aaPredicted RBP21.02■□□□□ 0.96
CLPTM1L-211ENST00000511268 SNAPC4Q5SXM2 1469 aa21.01■□□□□ 0.95
CLPTM1L-211ENST00000511268 WDR97A6NE52 1622 aa21.01■□□□□ 0.95
CLPTM1L-211ENST00000511268 GRIN2BQ13224 1484 aa21■□□□□ 0.95
CLPTM1L-211ENST00000511268 GAPVD1Q14C86 1478 aa21■□□□□ 0.95
CLPTM1L-211ENST00000511268 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
CLPTM1L-211ENST00000511268 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
CLPTM1L-211ENST00000511268 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
CLPTM1L-211ENST00000511268 RIMBP3CA6NJZ7 1639 aa20.95■□□□□ 0.94
CLPTM1L-211ENST00000511268 RIMBP3BA6NNM3 1639 aa20.95■□□□□ 0.94
CLPTM1L-211ENST00000511268 RIMBP3Q9UFD9 1639 aa20.95■□□□□ 0.94
CLPTM1L-211ENST00000511268 BIVM-ERCC5R4GMW8 1640 aa20.95■□□□□ 0.94
CLPTM1L-211ENST00000511268 MAGI1Q96QZ7 1491 aaPredicted RBP20.94■□□□□ 0.94
CLPTM1L-211ENST00000511268 ARHGEF11O15085 1522 aa20.91■□□□□ 0.94
CLPTM1L-211ENST00000511268 PBRM1Q86U86 1689 aa20.91■□□□□ 0.94
CLPTM1L-211ENST00000511268 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.93
CLPTM1L-211ENST00000511268 SYNJ2O15056 1496 aa20.88■□□□□ 0.93
CLPTM1L-211ENST00000511268 CYB5RLQ6IPT4 315 aa20.88■□□□□ 0.93
CLPTM1L-211ENST00000511268 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
CLPTM1L-211ENST00000511268 ARAP1Q96P48 1450 aa20.74■□□□□ 0.91
CLPTM1L-211ENST00000511268 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
CLPTM1L-211ENST00000511268 GRIN2AQ12879 1464 aa20.72■□□□□ 0.91
CLPTM1L-211ENST00000511268 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
CLPTM1L-211ENST00000511268 ADAMTS12P58397 1594 aa20.71■□□□□ 0.91
CLPTM1L-211ENST00000511268 NUP160Q12769 1436 aa20.63■□□□□ 0.89
CLPTM1L-211ENST00000511268 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
CLPTM1L-211ENST00000511268 IGF1RP08069 1367 aa20.62■□□□□ 0.89
CLPTM1L-211ENST00000511268 KIF27Q86VH2 1401 aa20.61■□□□□ 0.89
CLPTM1L-211ENST00000511268 TRHP20396 242 aaPredicted RBP20.55■□□□□ 0.88
CLPTM1L-211ENST00000511268 JPH4Q96JJ6 628 aa20.55■□□□□ 0.88
CLPTM1L-211ENST00000511268 ERCC6L2Q5T890 1561 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 202.7 ms