Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 POU2F1-216ENST00000560232 1195 ntTSL 210.38□□□□□ -0.753e-7■■■□□ 17.4
LSM11P83369 POU2F1-207ENST00000442313 496 ntTSL 310.37□□□□□ -0.753e-7■■■□□ 17.4
LSM11P83369 KIF13B-205ENST00000523968 1750 ntTSL 510.08□□□□□ -0.83e-7■■■□□ 17.4
LSM11P83369 ZNF431-205ENST00000598331 1082 ntTSL 510.06□□□□□ -0.83e-7■■■□□ 17.4
LSM11P83369 PCNP-204ENST00000469941 2028 ntTSL 1 (best) BASIC9.84□□□□□ -0.833e-10■■■□□ 17.4
LSM11P83369 KIF13B-201ENST00000521515 2765 ntTSL 5 BASIC9.48□□□□□ -0.893e-7■■■□□ 17.4
LSM11P83369 RICTOR-206ENST00000510711 3126 ntTSL 29.29□□□□□ -0.923e-7■■■□□ 17.4
LSM11P83369 POU2F1-213ENST00000557909 588 ntTSL 49.25□□□□□ -0.933e-7■■■□□ 17.4
LSM11P83369 ZNF431-207ENST00000600692 1971 ntTSL 5 BASIC8.48□□□□□ -1.053e-7■■■□□ 17.4
LSM11P83369 POU2F1-214ENST00000559038 557 ntTSL 48.48□□□□□ -1.053e-7■■■□□ 17.4
LSM11P83369 RICTOR-208ENST00000513566 1762 ntTSL 1 (best)8.44□□□□□ -1.063e-7■■■□□ 17.4
LSM11P83369 RICTOR-209ENST00000514735 686 ntTSL 38.19□□□□□ -1.13e-7■■■□□ 17.4
LSM11P83369 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.75□□□□□ -1.333e-7■■■□□ 17.4
LSM11P83369 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.333e-7■■■□□ 17.4
LSM11P83369 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.6□□□□□ -1.353e-7■■■□□ 17.4
LSM11P83369 POU2F1-201ENST00000271411 13945 ntTSL 1 (best)5.96□□□□□ -1.463e-7■■■□□ 17.4
LSM11P83369 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.623e-7■■■□□ 17.4
LSM11P83369 POU2F1-203ENST00000367865 14332 ntTSL 24.3□□□□□ -1.723e-7■■■□□ 17.4
LSM11P83369 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.723e-7■■■□□ 17.4
LSM11P83369 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.753e-7■■■□□ 17.4
LSM11P83369 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.823e-7■■■□□ 17.4
LSM11P83369 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.09□□□□□ -1.913e-10■■■□□ 17.4
LSM11P83369 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.83□□□□□ -1.963e-7■■■□□ 17.4
LSM11P83369 RICTOR-207ENST00000511516 7312 ntTSL 1 (best)2.57□□□□□ -23e-7■■■□□ 17.4
LSM11P83369 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.053e-7■■■□□ 17.4
LSM11P83369 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.168e-7■■■□□ 17.4
LSM11P83369 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.07□□□□□ -0.168e-7■■■□□ 17.4
LSM11P83369 UNKL-207ENST00000403703 4281 ntTSL 1 (best)12.31□□□□□ -0.448e-7■■■□□ 17.4
LSM11P83369 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.223e-11■■■□□ 17.4
LSM11P83369 TOP3B-213ENST00000457179 3061 ntTSL 512.64□□□□□ -0.393e-11■■■□□ 17.4
LSM11P83369 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.453e-11■■■□□ 17.4
LSM11P83369 TOP3B-210ENST00000444502 4163 ntTSL 29.77□□□□□ -0.853e-11■■■□□ 17.4
LSM11P83369 PHKA2-203ENST00000469485 1945 ntTSL 215.84■□□□□ 0.134e-8■■■□□ 17.3
LSM11P83369 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.489e-9■■■□□ 17.3
LSM11P83369 SPATA20-205ENST00000503127 2734 ntTSL 1 (best)15.81■□□□□ 0.129e-9■■■□□ 17.3
LSM11P83369 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.94□□□□□ -0.029e-9■■■□□ 17.3
LSM11P83369 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.09□□□□□ -0.159e-9■■■□□ 17.3
LSM11P83369 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.289e-9■■■□□ 17.3
LSM11P83369 SPATA20-220ENST00000511937 2669 ntTSL 1 (best)12.49□□□□□ -0.419e-9■■■□□ 17.3
LSM11P83369 SPATA20-208ENST00000504334 3539 ntTSL 212.15□□□□□ -0.469e-9■■■□□ 17.3
LSM11P83369 SPATA20-204ENST00000503063 3232 ntTSL 211.88□□□□□ -0.519e-9■■■□□ 17.3
LSM11P83369 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.34■■□□□ 1.011e-6■■■□□ 17.3
LSM11P83369 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.351e-6■■■□□ 17.3
LSM11P83369 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.361e-6■■■□□ 17.3
LSM11P83369 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.521e-6■■■□□ 17.3
LSM11P83369 AC015813.1-201ENST00000582096 2483 nt7.29□□□□□ -1.248e-7■■■□□ 17.3
LSM11P83369 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.88□□□□□ -1.638e-7■■■□□ 17.3
LSM11P83369 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.81□□□□□ -1.648e-7■■■□□ 17.3
LSM11P83369 KDM4B-208ENST00000589104 3470 ntTSL 212.63□□□□□ -0.396e-7■■■□□ 17.3
LSM11P83369 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.35■□□□□ 0.694e-10■■■□□ 17.3
LSM11P83369 RHOF-206ENST00000545544 826 ntTSL 514.56□□□□□ -0.084e-10■■■□□ 17.3
LSM11P83369 RHOF-205ENST00000541657 1626 ntTSL 514.55□□□□□ -0.084e-10■■■□□ 17.3
LSM11P83369 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.6□□□□□ -0.234e-10■■■□□ 17.3
LSM11P83369 CORO7-PAM16-201ENST00000572274 672 ntTSL 513.94□□□□□ -0.184e-6■■■□□ 17.3
LSM11P83369 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.334e-6■■■□□ 17.3
LSM11P83369 THAP9-AS1-202ENST00000504520 2770 ntTSL 1 (best) BASIC11.59□□□□□ -0.551e-323■■■□□ 17.3
LSM11P83369 THAP9-AS1-208ENST00000508772 566 ntTSL 410.64□□□□□ -0.711e-323■■■□□ 17.3
LSM11P83369 THAP9-AS1-211ENST00000512932 971 ntTSL 210.48□□□□□ -0.731e-323■■■□□ 17.3
LSM11P83369 THAP9-AS1-210ENST00000511271 516 ntTSL 28.99□□□□□ -0.971e-323■■■□□ 17.3
LSM11P83369 SEC31A-218ENST00000506495 541 ntTSL 48.85□□□□□ -0.991e-323■■■□□ 17.3
LSM11P83369 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC8.63□□□□□ -1.031e-323■■■□□ 17.3
LSM11P83369 SEC31A-211ENST00000503210 553 ntTSL 48.4□□□□□ -1.061e-323■■■□□ 17.3
LSM11P83369 SEC31A-220ENST00000507051 458 ntTSL 48.14□□□□□ -1.111e-323■■■□□ 17.3
LSM11P83369 SEC31A-222ENST00000507676 551 ntTSL 46.71□□□□□ -1.341e-323■■■□□ 17.3
LSM11P83369 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.592e-7■■■□□ 17.3
LSM11P83369 UNC13D-215ENST00000591563 4382 ntTSL 211.6□□□□□ -0.552e-6■■■□□ 17.3
LSM11P83369 COL2A1-208ENST00000493991 3756 ntTSL 210.36□□□□□ -0.753e-8■■■□□ 17.3
LSM11P83369 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.182e-8■■■□□ 17.3
LSM11P83369 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.38e-10■■■□□ 17.3
LSM11P83369 BNIP3-202ENST00000540159 3066 ntTSL 1 (best)13.08□□□□□ -0.322e-8■■■□□ 17.3
LSM11P83369 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.01■□□□□ 0.479e-7■■■□□ 17.3
LSM11P83369 PTBP1-210ENST00000586944 4661 ntTSL 215.84■□□□□ 0.139e-7■■■□□ 17.3
LSM11P83369 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.079e-7■■■□□ 17.3
LSM11P83369 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.6□□□□□ -0.079e-7■■■□□ 17.3
LSM11P83369 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.099e-7■■■□□ 17.3
LSM11P83369 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.66□□□□□ -0.229e-7■■■□□ 17.3
LSM11P83369 PTBP1-213ENST00000587191 357 ntTSL 510.18□□□□□ -0.789e-7■■■□□ 17.3
LSM11P83369 TRO-221ENST00000475183 632 ntTSL 310.78□□□□□ -0.685e-6■■■□□ 17.3
LSM11P83369 COL27A1-206ENST00000490831 666 ntTSL 313.21□□□□□ -0.291e-12■■■□□ 17.2
LSM11P83369 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.554e-6■■■□□ 17.2
LSM11P83369 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.654e-6■■■□□ 17.2
LSM11P83369 MICALL2-209ENST00000479007 1855 ntTSL 218.24■□□□□ 0.515e-9■■■□□ 17.2
LSM11P83369 MICALL2-215ENST00000496184 2722 ntTSL 216.59■□□□□ 0.255e-9■■■□□ 17.2
LSM11P83369 MICALL2-205ENST00000467783 639 ntTSL 315.7■□□□□ 0.15e-9■■■□□ 17.2
LSM11P83369 MICALL2-206ENST00000470807 668 ntTSL 314.99□□□□□ -0.015e-9■■■□□ 17.2
LSM11P83369 MICALL2-207ENST00000471899 899 ntTSL 213.61□□□□□ -0.235e-9■■■□□ 17.2
LSM11P83369 MICALL2-214ENST00000493998 404 ntTSL 211.08□□□□□ -0.645e-9■■■□□ 17.2
LSM11P83369 HGS-203ENST00000570652 523 ntTSL 518.04■□□□□ 0.483e-14■■■□□ 17.1
LSM11P83369 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.173e-14■■■□□ 17.1
LSM11P83369 HGS-210ENST00000573320 547 ntTSL 313.3□□□□□ -0.283e-14■■■□□ 17.1
LSM11P83369 HGS-211ENST00000573949 461 ntTSL 511.99□□□□□ -0.493e-14■■■□□ 17.1
LSM11P83369 LINC00355-201ENST00000456627 1878 ntTSL 2 BASIC11.78□□□□□ -0.529e-12■■■□□ 17.1
LSM11P83369 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.921e-7■■■□□ 17.1
LSM11P83369 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.931e-7■■■□□ 17.1
LSM11P83369 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.28■■□□□ 19e-9■■■□□ 17.1
LSM11P83369 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.349e-9■■■□□ 17.1
LSM11P83369 UBE2D2-204ENST00000505007 1170 ntTSL 316.55■□□□□ 0.249e-9■■■□□ 17.1
LSM11P83369 UBE2D2-203ENST00000398734 901 ntTSL 512.38□□□□□ -0.439e-9■■■□□ 17.1
LSM11P83369 PSME2-205ENST00000559005 496 ntTSL 210.33□□□□□ -0.764e-10■■■□□ 17.1
LSM11P83369 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.87■□□□□ 0.453e-9■■■□□ 17.1
Retrieved 100 of 11,495 protein–RNA pairs in 54.8 ms