RNA–Protein interactions for RNA: ENST00000507676.5

SEC31A-222, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 4

Gene SEC31A, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-222ENST00000507676 NISCHQ9Y2I1 1504 aa18.09■□□□□ 0.49
SEC31A-222ENST00000507676 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
SEC31A-222ENST00000507676 ABCC9O60706 1549 aa15.51■□□□□ 0.07
SEC31A-222ENST00000507676 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
SEC31A-222ENST00000507676 NACADO15069 1562 aa14.98□□□□□ -0.01
SEC31A-222ENST00000507676 DCAF1Q9Y4B6 1507 aa14.97□□□□□ -0.01
SEC31A-222ENST00000507676 MYO15BQ96JP2 1530 aa14.96□□□□□ -0.02
SEC31A-222ENST00000507676 AEBP2Q6ZN18 517 aaPredicted RBP14.95□□□□□ -0.02
SEC31A-222ENST00000507676 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
SEC31A-222ENST00000507676 DCAF8L2P0C7V8 631 aa14.9□□□□□ -0.02
SEC31A-222ENST00000507676 UNC13AQ9UPW8 1703 aa14.66□□□□□ -0.06
SEC31A-222ENST00000507676 SCRIBQ14160 1630 aa14.65□□□□□ -0.06
SEC31A-222ENST00000507676 BICRAQ9NZM4 1560 aa14.59□□□□□ -0.07
SEC31A-222ENST00000507676 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
SEC31A-222ENST00000507676 SHROOM4Q9ULL8 1493 aa14.39□□□□□ -0.11
SEC31A-222ENST00000507676 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
SEC31A-222ENST00000507676 CECR2Q9BXF3 1484 aa14.12□□□□□ -0.15
SEC31A-222ENST00000507676 DNAJC5BQ9UF47 199 aa14.11□□□□□ -0.15
SEC31A-222ENST00000507676 CC2D2AQ9P2K1 1620 aa14.04□□□□□ -0.16
SEC31A-222ENST00000507676 SMARCA4P51532 1647 aa14.01□□□□□ -0.17
SEC31A-222ENST00000507676 MROH2BQ7Z745 1585 aa13.98□□□□□ -0.17
SEC31A-222ENST00000507676 BAZ1AQ9NRL2 1556 aaPredicted RBP13.98□□□□□ -0.17
SEC31A-222ENST00000507676 ATAD2BQ9ULI0 1458 aa13.89□□□□□ -0.19
SEC31A-222ENST00000507676 PEG3Q9GZU2 1588 aa13.88□□□□□ -0.19
SEC31A-222ENST00000507676 RSF1Q96T23 1441 aaPredicted RBP13.86□□□□□ -0.19
SEC31A-222ENST00000507676 SMARCA2P51531 1590 aa13.83□□□□□ -0.19
SEC31A-222ENST00000507676 NCAPD3P42695 1498 aa13.83□□□□□ -0.2
SEC31A-222ENST00000507676 WIZO95785 1651 aa13.82□□□□□ -0.2
SEC31A-222ENST00000507676 CHIC1Q5VXU3 224 aa13.82□□□□□ -0.2
SEC31A-222ENST00000507676 HMGXB3Q12766 1538 aa13.8□□□□□ -0.2
SEC31A-222ENST00000507676 BAZ1BQ9UIG0 1483 aaKnown RBP13.75□□□□□ -0.21
SEC31A-222ENST00000507676 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
SEC31A-222ENST00000507676 SUPT5HO00267 1087 aaKnown RBP13.54□□□□□ -0.24
SEC31A-222ENST00000507676 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
SEC31A-222ENST00000507676 NESP48681 1621 aa13.5□□□□□ -0.25
SEC31A-222ENST00000507676 LAMC3Q9Y6N6 1575 aa13.42□□□□□ -0.26
SEC31A-222ENST00000507676 CADPSQ9ULU8 1353 aa13.42□□□□□ -0.26
SEC31A-222ENST00000507676 CFTRP13569 1480 aa13.41□□□□□ -0.26
SEC31A-222ENST00000507676 KIF21AQ7Z4S6 1674 aa13.32□□□□□ -0.28
SEC31A-222ENST00000507676 ERCC6Q03468 1493 aa13.29□□□□□ -0.28
SEC31A-222ENST00000507676 FANCD2Q9BXW9 1451 aa13.29□□□□□ -0.28
SEC31A-222ENST00000507676 PRDM2Q13029 1718 aa13.29□□□□□ -0.28
SEC31A-222ENST00000507676 PDS5BQ9NTI5 1447 aa13.29□□□□□ -0.28
SEC31A-222ENST00000507676 THOC2Q8NI27 1593 aaKnown RBP13.28□□□□□ -0.28
SEC31A-222ENST00000507676 CEP164Q9UPV0 1460 aa13.24□□□□□ -0.29
SEC31A-222ENST00000507676 MRC2Q9UBG0 1479 aa13.21□□□□□ -0.3
SEC31A-222ENST00000507676 WDR62O43379 1518 aa13.19□□□□□ -0.3
SEC31A-222ENST00000507676 URB2Q14146 1524 aaKnown RBP13.19□□□□□ -0.3
SEC31A-222ENST00000507676 CUX2O14529 1486 aa13.12□□□□□ -0.31
SEC31A-222ENST00000507676 TOPBP1Q92547 1522 aa13.12□□□□□ -0.31
SEC31A-222ENST00000507676 CUX1P39880 1505 aa13.11□□□□□ -0.31
SEC31A-222ENST00000507676 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
SEC31A-222ENST00000507676 ABCC8Q09428 1581 aa13.1□□□□□ -0.31
SEC31A-222ENST00000507676 SYNJ1O43426 1573 aa13.06□□□□□ -0.32
SEC31A-222ENST00000507676 WRNQ14191 1432 aaPredicted RBP eCLIP13.03□□□□□ -0.32
SEC31A-222ENST00000507676 POLA1P09884 1462 aaPredicted RBP13.03□□□□□ -0.32
SEC31A-222ENST00000507676 FGD5Q6ZNL6 1462 aa13.01□□□□□ -0.33
SEC31A-222ENST00000507676 BIVM-ERCC5R4GMW8 1640 aa13.01□□□□□ -0.33
SEC31A-222ENST00000507676 TOP2BQ02880 1626 aa13□□□□□ -0.33
SEC31A-222ENST00000507676 RAD54L2Q9Y4B4 1467 aa12.97□□□□□ -0.33
SEC31A-222ENST00000507676 TARBP1Q13395 1621 aaKnown RBP12.97□□□□□ -0.33
SEC31A-222ENST00000507676 IFT140Q96RY7 1462 aa12.96□□□□□ -0.34
SEC31A-222ENST00000507676 ZNF608Q9ULD9 1512 aaPredicted RBP12.95□□□□□ -0.34
SEC31A-222ENST00000507676 WDR97A6NE52 1622 aa12.93□□□□□ -0.34
SEC31A-222ENST00000507676 SOGA1O94964 1423 aa12.91□□□□□ -0.34
SEC31A-222ENST00000507676 EIF4G3O43432 1585 aaKnown RBP12.9□□□□□ -0.35
SEC31A-222ENST00000507676 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
SEC31A-222ENST00000507676 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.353e-8■■■■■ 30.5
SEC31A-222ENST00000507676 ABCA5Q8WWZ7 1642 aa12.85□□□□□ -0.35
SEC31A-222ENST00000507676 TDRD9Q8NDG6 1382 aaKnown RBP12.84□□□□□ -0.35
SEC31A-222ENST00000507676 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
SEC31A-222ENST00000507676 SNAPC4Q5SXM2 1469 aa12.77□□□□□ -0.37
SEC31A-222ENST00000507676 PBRM1Q86U86 1689 aa12.77□□□□□ -0.37
SEC31A-222ENST00000507676 GRIN2BQ13224 1484 aa12.76□□□□□ -0.37
SEC31A-222ENST00000507676 RUSC2Q8N2Y8 1516 aa12.74□□□□□ -0.37
SEC31A-222ENST00000507676 TRIM41Q8WV44 630 aa12.74□□□□□ -0.37
SEC31A-222ENST00000507676 ADAMTS12P58397 1594 aa12.73□□□□□ -0.37
SEC31A-222ENST00000507676 SENP3Q9H4L4 574 aaPredicted RBP12.72□□□□□ -0.37
SEC31A-222ENST00000507676 ERICH3Q5RHP9 1530 aa12.71□□□□□ -0.38
SEC31A-222ENST00000507676 MAGI1Q96QZ7 1491 aaPredicted RBP12.71□□□□□ -0.38
SEC31A-222ENST00000507676 KIF27Q86VH2 1401 aa12.71□□□□□ -0.38
SEC31A-222ENST00000507676 CHD1O14646 1710 aa12.67□□□□□ -0.38
SEC31A-222ENST00000507676 IGF1RP08069 1367 aa12.67□□□□□ -0.38
SEC31A-222ENST00000507676 SYNJ2O15056 1496 aa12.66□□□□□ -0.38
SEC31A-222ENST00000507676 FHAD1B1AJZ9 1412 aa12.64□□□□□ -0.39
SEC31A-222ENST00000507676 CUL7Q14999 1698 aa12.62□□□□□ -0.39
SEC31A-222ENST00000507676 GRIN2AQ12879 1464 aa12.62□□□□□ -0.39
SEC31A-222ENST00000507676 CEP170Q5SW79 1584 aa12.6□□□□□ -0.39
SEC31A-222ENST00000507676 CLASP1Q7Z460 1538 aa12.58□□□□□ -0.4
SEC31A-222ENST00000507676 PRXQ9BXM0 1461 aa12.58□□□□□ -0.4
SEC31A-222ENST00000507676 NUP160Q12769 1436 aa12.57□□□□□ -0.4
SEC31A-222ENST00000507676 FBLN2P98095 1184 aa12.57□□□□□ -0.4
SEC31A-222ENST00000507676 CARMIL1Q5VZK9 1371 aa12.56□□□□□ -0.4
SEC31A-222ENST00000507676 EEA1Q15075 1411 aa12.56□□□□□ -0.4
SEC31A-222ENST00000507676 CHMP7Q8WUX9 453 aaPredicted RBP12.56□□□□□ -0.4
SEC31A-222ENST00000507676 PHF23Q9BUL5 403 aaPredicted RBP12.54□□□□□ -0.4
SEC31A-222ENST00000507676 FAM9AQ8IZU1 332 aaPredicted RBP12.53□□□□□ -0.4
SEC31A-222ENST00000507676 RAPGEF2Q9Y4G8 1499 aa12.53□□□□□ -0.4
SEC31A-222ENST00000507676 OSCARQ8IYS5 282 aa12.52□□□□□ -0.41
SEC31A-222ENST00000507676 CSRNP3Q8WYN3 585 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms