RNA–Protein interactions for RNA: ENST00000511937.5

SPATA20-220, Transcript of spermatogenesis associated 20, humanhuman

TSL 1 (best)

Gene SPATA20, Length 2,669 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA20-220ENST00000511937 NISCHQ9Y2I1 1504 aa28.14■■■□□ 2.1
SPATA20-220ENST00000511937 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.5
SPATA20-220ENST00000511937 DCAF8L2P0C7V8 631 aa23.6■■□□□ 1.37
SPATA20-220ENST00000511937 ZCCHC6Q5VYS8 1495 aaKnown RBP23.58■■□□□ 1.36
SPATA20-220ENST00000511937 ABCC9O60706 1549 aa23.56■■□□□ 1.36
SPATA20-220ENST00000511937 SHROOM4Q9ULL8 1493 aa23.28■■□□□ 1.32
SPATA20-220ENST00000511937 DCAF1Q9Y4B6 1507 aa23.12■■□□□ 1.29
SPATA20-220ENST00000511937 MYO15BQ96JP2 1530 aa22.87■■□□□ 1.25
SPATA20-220ENST00000511937 NACADO15069 1562 aa22.87■■□□□ 1.25
SPATA20-220ENST00000511937 SUPT5HO00267 1087 aaKnown RBP22.84■■□□□ 1.25
SPATA20-220ENST00000511937 RB1CC1Q8TDY2 1594 aa22.73■■□□□ 1.23
SPATA20-220ENST00000511937 SCRIBQ14160 1630 aa22.69■■□□□ 1.22
SPATA20-220ENST00000511937 UNC13AQ9UPW8 1703 aa22.33■■□□□ 1.17
SPATA20-220ENST00000511937 PABPN1Q86U42 306 aaKnown RBP eCLIP22.3■■□□□ 1.166e-7■■■■■ 27.5
SPATA20-220ENST00000511937 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
SPATA20-220ENST00000511937 BICRAQ9NZM4 1560 aa22.14■■□□□ 1.13
SPATA20-220ENST00000511937 CECR2Q9BXF3 1484 aa22.01■■□□□ 1.11
SPATA20-220ENST00000511937 RSF1Q96T23 1441 aaPredicted RBP21.84■■□□□ 1.09
SPATA20-220ENST00000511937 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
SPATA20-220ENST00000511937 BAZ1AQ9NRL2 1556 aaPredicted RBP21.69■■□□□ 1.06
SPATA20-220ENST00000511937 HRCP23327 699 aa21.68■■□□□ 1.06
SPATA20-220ENST00000511937 SMARCA4P51532 1647 aa21.65■■□□□ 1.06
SPATA20-220ENST00000511937 PCGF6Q9BYE7 350 aa21.64■■□□□ 1.05
SPATA20-220ENST00000511937 LOC105371045A0A1W2PR82 267 aa21.63■■□□□ 1.05
SPATA20-220ENST00000511937 WIZO95785 1651 aa21.62■■□□□ 1.05
SPATA20-220ENST00000511937 EIF4G1Q04637 1599 aaKnown RBP21.47■■□□□ 1.03
SPATA20-220ENST00000511937 ATAD2BQ9ULI0 1458 aa21.37■■□□□ 1.01
SPATA20-220ENST00000511937 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
SPATA20-220ENST00000511937 PPARGC1BQ86YN6 1023 aaKnown RBP21.3■■□□□ 1
SPATA20-220ENST00000511937 TOP2AP11388 1531 aaKnown RBP21.28■■□□□ 1
SPATA20-220ENST00000511937 SMARCA2P51531 1590 aa21.26■□□□□ 0.99
SPATA20-220ENST00000511937 BAZ1BQ9UIG0 1483 aaKnown RBP21.23■□□□□ 0.99
SPATA20-220ENST00000511937 TRIM41Q8WV44 630 aa21.22■□□□□ 0.99
SPATA20-220ENST00000511937 CC2D2AQ9P2K1 1620 aa21.22■□□□□ 0.99
SPATA20-220ENST00000511937 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
SPATA20-220ENST00000511937 NCAPD3P42695 1498 aa21.17■□□□□ 0.98
SPATA20-220ENST00000511937 TRIM26Q12899 539 aaPredicted RBP21.16■□□□□ 0.98
SPATA20-220ENST00000511937 FAM9AQ8IZU1 332 aaPredicted RBP21.12■□□□□ 0.97
SPATA20-220ENST00000511937 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
SPATA20-220ENST00000511937 HMGXB3Q12766 1538 aa21.06■□□□□ 0.96
SPATA20-220ENST00000511937 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
SPATA20-220ENST00000511937 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
SPATA20-220ENST00000511937 ABCC8Q09428 1581 aa20.73■□□□□ 0.91
SPATA20-220ENST00000511937 CFTRP13569 1480 aa20.67■□□□□ 0.9
SPATA20-220ENST00000511937 CADPSQ9ULU8 1353 aa20.67■□□□□ 0.9
SPATA20-220ENST00000511937 ZEB1P37275 1124 aaPredicted RBP20.66■□□□□ 0.9
SPATA20-220ENST00000511937 NESP48681 1621 aa20.65■□□□□ 0.9
SPATA20-220ENST00000511937 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
SPATA20-220ENST00000511937 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
SPATA20-220ENST00000511937 FANCD2Q9BXW9 1451 aa20.45■□□□□ 0.86
SPATA20-220ENST00000511937 SOGA1O94964 1423 aa20.44■□□□□ 0.86
SPATA20-220ENST00000511937 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
SPATA20-220ENST00000511937 PRDM2Q13029 1718 aa20.42■□□□□ 0.86
SPATA20-220ENST00000511937 CUX1P39880 1505 aa20.38■□□□□ 0.85
SPATA20-220ENST00000511937 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
SPATA20-220ENST00000511937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.37■□□□□ 0.85
SPATA20-220ENST00000511937 CEP162Q5TB80 1403 aa20.36■□□□□ 0.85
SPATA20-220ENST00000511937 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.84
SPATA20-220ENST00000511937 TOP2BQ02880 1626 aa20.32■□□□□ 0.84
SPATA20-220ENST00000511937 TTBK1Q5TCY1 1321 aaPredicted RBP20.3■□□□□ 0.84
SPATA20-220ENST00000511937 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
SPATA20-220ENST00000511937 TNIKQ9UKE5 1360 aa20.3■□□□□ 0.84
SPATA20-220ENST00000511937 CSRNP3Q8WYN3 585 aa20.29■□□□□ 0.84
SPATA20-220ENST00000511937 KIF21AQ7Z4S6 1674 aa20.28■□□□□ 0.84
SPATA20-220ENST00000511937 BIVM-ERCC5R4GMW8 1640 aa20.26■□□□□ 0.83
SPATA20-220ENST00000511937 EEA1Q15075 1411 aa20.25■□□□□ 0.83
SPATA20-220ENST00000511937 CCER1Q8TC90 406 aaPredicted RBP20.25■□□□□ 0.83
SPATA20-220ENST00000511937 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
SPATA20-220ENST00000511937 UBTFP17480 764 aaKnown RBP20.21■□□□□ 0.83
SPATA20-220ENST00000511937 MYT1Q01538 1121 aa20.2■□□□□ 0.82
SPATA20-220ENST00000511937 TOPBP1Q92547 1522 aa20.2■□□□□ 0.82
SPATA20-220ENST00000511937 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
SPATA20-220ENST00000511937 DNMBPQ6XZF7 1577 aa20.16■□□□□ 0.82
SPATA20-220ENST00000511937 GOLGA3Q08378 1498 aa20.16■□□□□ 0.82
SPATA20-220ENST00000511937 ERCC6Q03468 1493 aa20.15■□□□□ 0.82
SPATA20-220ENST00000511937 RAD54L2Q9Y4B4 1467 aa20.12■□□□□ 0.81
SPATA20-220ENST00000511937 POLA1P09884 1462 aaPredicted RBP20.11■□□□□ 0.81
SPATA20-220ENST00000511937 MRC2Q9UBG0 1479 aa20.07■□□□□ 0.8
SPATA20-220ENST00000511937 SCAF1Q9H7N4 1312 aaKnown RBP20.05■□□□□ 0.8
SPATA20-220ENST00000511937 CUX2O14529 1486 aa20.04■□□□□ 0.8
SPATA20-220ENST00000511937 KIF21BO75037 1637 aa20.02■□□□□ 0.79
SPATA20-220ENST00000511937 KIF27Q86VH2 1401 aa20■□□□□ 0.79
SPATA20-220ENST00000511937 TDRD9Q8NDG6 1382 aaKnown RBP19.97■□□□□ 0.79
SPATA20-220ENST00000511937 CLIP1P30622 1438 aa19.95■□□□□ 0.78
SPATA20-220ENST00000511937 WDR62O43379 1518 aa19.94■□□□□ 0.78
SPATA20-220ENST00000511937 THOC2Q8NI27 1593 aaKnown RBP19.94■□□□□ 0.78
SPATA20-220ENST00000511937 ABCA10Q8WWZ4 1543 aa19.93■□□□□ 0.78
SPATA20-220ENST00000511937 RAPGEF2Q9Y4G8 1499 aa19.93■□□□□ 0.78
SPATA20-220ENST00000511937 IGF1RP08069 1367 aa19.92■□□□□ 0.78
SPATA20-220ENST00000511937 DIEXFQ68CQ4 756 aaKnown RBP19.91■□□□□ 0.78
SPATA20-220ENST00000511937 TARBP1Q13395 1621 aaKnown RBP19.88■□□□□ 0.77
SPATA20-220ENST00000511937 VPS8Q8N3P4 1428 aa19.87■□□□□ 0.77
SPATA20-220ENST00000511937 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.777e-8■■■□□ 18.3
SPATA20-220ENST00000511937 HNRNPUL2Q1KMD3 747 aaKnown RBP19.84■□□□□ 0.77
SPATA20-220ENST00000511937 RANGAP1P46060 587 aaPredicted RBP19.84■□□□□ 0.77
SPATA20-220ENST00000511937 ZNF608Q9ULD9 1512 aaPredicted RBP19.84■□□□□ 0.77
SPATA20-220ENST00000511937 WDR97A6NE52 1622 aa19.83■□□□□ 0.77
SPATA20-220ENST00000511937 PRXQ9BXM0 1461 aa19.83■□□□□ 0.76
SPATA20-220ENST00000511937 NEUROD1Q13562 356 aa19.81■□□□□ 0.76
SPATA20-220ENST00000511937 GAPVD1Q14C86 1478 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms