RNA–Protein interactions for RNA: ENST00000469941.5

PCNP-204, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best) BASIC

Gene PCNP, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-204ENST00000469941 NISCHQ9Y2I1 1504 aa27.34■■□□□ 1.97
PCNP-204ENST00000469941 CCDC180Q9P1Z9 1646 aa24.23■■□□□ 1.47
PCNP-204ENST00000469941 ABCC9O60706 1549 aa23.99■■□□□ 1.43
PCNP-204ENST00000469941 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
PCNP-204ENST00000469941 RB1CC1Q8TDY2 1594 aa22.88■■□□□ 1.25
PCNP-204ENST00000469941 NACADO15069 1562 aa22.82■■□□□ 1.24
PCNP-204ENST00000469941 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
PCNP-204ENST00000469941 MYO15BQ96JP2 1530 aa22.61■■□□□ 1.21
PCNP-204ENST00000469941 UNC13AQ9UPW8 1703 aa22.53■■□□□ 1.2
PCNP-204ENST00000469941 DCAF1Q9Y4B6 1507 aa22.5■■□□□ 1.19
PCNP-204ENST00000469941 PABPN1Q86U42 306 aaKnown RBP eCLIP22.49■■□□□ 1.19
PCNP-204ENST00000469941 BICRAQ9NZM4 1560 aa22.34■■□□□ 1.17
PCNP-204ENST00000469941 DNAJC5BQ9UF47 199 aa22.28■■□□□ 1.16
PCNP-204ENST00000469941 SCRIBQ14160 1630 aa22.25■■□□□ 1.15
PCNP-204ENST00000469941 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
PCNP-204ENST00000469941 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
PCNP-204ENST00000469941 CC2D2AQ9P2K1 1620 aa21.67■■□□□ 1.06
PCNP-204ENST00000469941 CECR2Q9BXF3 1484 aa21.51■■□□□ 1.03
PCNP-204ENST00000469941 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
PCNP-204ENST00000469941 ATAD2BQ9ULI0 1458 aa21.16■□□□□ 0.98
PCNP-204ENST00000469941 MROH2BQ7Z745 1585 aa21.14■□□□□ 0.98
PCNP-204ENST00000469941 BAZ1AQ9NRL2 1556 aaPredicted RBP21.13■□□□□ 0.97
PCNP-204ENST00000469941 NCAPD3P42695 1498 aa21.12■□□□□ 0.97
PCNP-204ENST00000469941 SMARCA2P51531 1590 aa21.02■□□□□ 0.96
PCNP-204ENST00000469941 PEG3Q9GZU2 1588 aa20.97■□□□□ 0.95
PCNP-204ENST00000469941 HMGXB3Q12766 1538 aa20.95■□□□□ 0.94
PCNP-204ENST00000469941 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
PCNP-204ENST00000469941 WIZO95785 1651 aa20.92■□□□□ 0.94
PCNP-204ENST00000469941 RSF1Q96T23 1441 aaPredicted RBP20.84■□□□□ 0.93
PCNP-204ENST00000469941 NESP48681 1621 aa20.79■□□□□ 0.92
PCNP-204ENST00000469941 ERCC6Q03468 1493 aa20.58■□□□□ 0.89
PCNP-204ENST00000469941 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
PCNP-204ENST00000469941 LAMC3Q9Y6N6 1575 aa20.53■□□□□ 0.88
PCNP-204ENST00000469941 CADPSQ9ULU8 1353 aa20.52■□□□□ 0.88
PCNP-204ENST00000469941 KIF21AQ7Z4S6 1674 aa20.47■□□□□ 0.87
PCNP-204ENST00000469941 CCDC88BA6NC98 1476 aa20.42■□□□□ 0.86
PCNP-204ENST00000469941 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.86
PCNP-204ENST00000469941 THOC2Q8NI27 1593 aaKnown RBP20.38■□□□□ 0.85
PCNP-204ENST00000469941 CFTRP13569 1480 aa20.38■□□□□ 0.85
PCNP-204ENST00000469941 SUPT5HO00267 1087 aaKnown RBP20.34■□□□□ 0.85
PCNP-204ENST00000469941 CUX2O14529 1486 aa20.33■□□□□ 0.85
PCNP-204ENST00000469941 FANCD2Q9BXW9 1451 aa20.28■□□□□ 0.84
PCNP-204ENST00000469941 CEP164Q9UPV0 1460 aa20.22■□□□□ 0.83
PCNP-204ENST00000469941 MRC2Q9UBG0 1479 aa20.21■□□□□ 0.83
PCNP-204ENST00000469941 WDR62O43379 1518 aa20.16■□□□□ 0.82
PCNP-204ENST00000469941 PRDM2Q13029 1718 aa20.15■□□□□ 0.82
PCNP-204ENST00000469941 URB2Q14146 1524 aaKnown RBP20.14■□□□□ 0.81
PCNP-204ENST00000469941 DNAJC5Q9H3Z4 198 aa19.98■□□□□ 0.79
PCNP-204ENST00000469941 TOPBP1Q92547 1522 aa19.96■□□□□ 0.79
PCNP-204ENST00000469941 DNMBPQ6XZF7 1577 aa19.87■□□□□ 0.77
PCNP-204ENST00000469941 ZNF608Q9ULD9 1512 aaPredicted RBP19.87■□□□□ 0.77
PCNP-204ENST00000469941 ABCC8Q09428 1581 aa19.81■□□□□ 0.76
PCNP-204ENST00000469941 CUX1P39880 1505 aa19.81■□□□□ 0.76
PCNP-204ENST00000469941 POLA1P09884 1462 aaPredicted RBP19.8■□□□□ 0.76
PCNP-204ENST00000469941 RAD54L2Q9Y4B4 1467 aa19.78■□□□□ 0.76
PCNP-204ENST00000469941 IFT140Q96RY7 1462 aa19.78■□□□□ 0.76
PCNP-204ENST00000469941 TARBP1Q13395 1621 aaKnown RBP19.77■□□□□ 0.75
PCNP-204ENST00000469941 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.757e-14■■■■□ 21.5
PCNP-204ENST00000469941 FGD5Q6ZNL6 1462 aa19.73■□□□□ 0.75
PCNP-204ENST00000469941 SOGA1O94964 1423 aa19.71■□□□□ 0.75
PCNP-204ENST00000469941 EIF4G3O43432 1585 aaKnown RBP19.69■□□□□ 0.74
PCNP-204ENST00000469941 TDRD9Q8NDG6 1382 aaKnown RBP19.69■□□□□ 0.74
PCNP-204ENST00000469941 SYNJ1O43426 1573 aa19.62■□□□□ 0.73
PCNP-204ENST00000469941 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
PCNP-204ENST00000469941 OSCARQ8IYS5 282 aa19.59■□□□□ 0.73
PCNP-204ENST00000469941 TOP2BQ02880 1626 aa19.55■□□□□ 0.72
PCNP-204ENST00000469941 WDR97A6NE52 1622 aa19.55■□□□□ 0.72
PCNP-204ENST00000469941 BIVM-ERCC5R4GMW8 1640 aa19.54■□□□□ 0.72
PCNP-204ENST00000469941 FBLN2P98095 1184 aa19.51■□□□□ 0.71
PCNP-204ENST00000469941 ABCA10Q8WWZ4 1543 aa19.49■□□□□ 0.71
PCNP-204ENST00000469941 CHD1O14646 1710 aa19.49■□□□□ 0.71
PCNP-204ENST00000469941 SNAPC4Q5SXM2 1469 aa19.47■□□□□ 0.71
PCNP-204ENST00000469941 GAPVD1Q14C86 1478 aa19.46■□□□□ 0.71
PCNP-204ENST00000469941 ABCA5Q8WWZ7 1642 aa19.43■□□□□ 0.7
PCNP-204ENST00000469941 GRIN2BQ13224 1484 aa19.42■□□□□ 0.7
PCNP-204ENST00000469941 PBRM1Q86U86 1689 aa19.42■□□□□ 0.7
PCNP-204ENST00000469941 CHMP7Q8WUX9 453 aaPredicted RBP19.37■□□□□ 0.69
PCNP-204ENST00000469941 MAGI1Q96QZ7 1491 aaPredicted RBP19.36■□□□□ 0.69
PCNP-204ENST00000469941 TRIM41Q8WV44 630 aa19.33■□□□□ 0.68
PCNP-204ENST00000469941 SYNJ2O15056 1496 aa19.32■□□□□ 0.68
PCNP-204ENST00000469941 RIMBP3CA6NJZ7 1639 aa19.3■□□□□ 0.68
PCNP-204ENST00000469941 RIMBP3BA6NNM3 1639 aa19.3■□□□□ 0.68
PCNP-204ENST00000469941 RIMBP3Q9UFD9 1639 aa19.3■□□□□ 0.68
PCNP-204ENST00000469941 ARHGEF11O15085 1522 aa19.28■□□□□ 0.68
PCNP-204ENST00000469941 ADAMTS12P58397 1594 aa19.24■□□□□ 0.67
PCNP-204ENST00000469941 CLASP1Q7Z460 1538 aa19.23■□□□□ 0.67
PCNP-204ENST00000469941 ERICH3Q5RHP9 1530 aa19.22■□□□□ 0.67
PCNP-204ENST00000469941 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
PCNP-204ENST00000469941 IGF1RP08069 1367 aa19.2■□□□□ 0.66
PCNP-204ENST00000469941 CYB5RLQ6IPT4 315 aa19.19■□□□□ 0.66
PCNP-204ENST00000469941 FHAD1B1AJZ9 1412 aa19.19■□□□□ 0.66
PCNP-204ENST00000469941 CEP170Q5SW79 1584 aa19.17■□□□□ 0.66
PCNP-204ENST00000469941 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
PCNP-204ENST00000469941 KIF27Q86VH2 1401 aa19.15■□□□□ 0.66
PCNP-204ENST00000469941 ARAP1Q96P48 1450 aa19.13■□□□□ 0.65
PCNP-204ENST00000469941 NUP160Q12769 1436 aa19.13■□□□□ 0.65
PCNP-204ENST00000469941 ERCC6L2Q5T890 1561 aa19.1■□□□□ 0.65
PCNP-204ENST00000469941 CARMIL1Q5VZK9 1371 aa19.03■□□□□ 0.64
PCNP-204ENST00000469941 CUL7Q14999 1698 aa19■□□□□ 0.63
PCNP-204ENST00000469941 JPH4Q96JJ6 628 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms