RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 NISCHQ9Y2I1 1504 aa20.98■□□□□ 0.95
COL2A1-208ENST00000493991 DCAF8L2P0C7V8 631 aa20.08■□□□□ 0.8
COL2A1-208ENST00000493991 SHROOM4Q9ULL8 1493 aa19.56■□□□□ 0.72
COL2A1-208ENST00000493991 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
COL2A1-208ENST00000493991 EHMT2Q96KQ7 1210 aa18.6■□□□□ 0.57
COL2A1-208ENST00000493991 FAM9AQ8IZU1 332 aaPredicted RBP18.21■□□□□ 0.51
COL2A1-208ENST00000493991 PCGF6Q9BYE7 350 aa17.92■□□□□ 0.46
COL2A1-208ENST00000493991 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
COL2A1-208ENST00000493991 LOC105371045A0A1W2PR82 267 aa17.83■□□□□ 0.44
COL2A1-208ENST00000493991 CHIC1Q5VXU3 224 aa17.82■□□□□ 0.44
COL2A1-208ENST00000493991 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
COL2A1-208ENST00000493991 ABCC9O60706 1549 aa17.75■□□□□ 0.43
COL2A1-208ENST00000493991 PPARGC1BQ86YN6 1023 aaKnown RBP17.68■□□□□ 0.42
COL2A1-208ENST00000493991 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
COL2A1-208ENST00000493991 PABPN1Q86U42 306 aaKnown RBP eCLIP17.53■□□□□ 0.48e-7■■■□□ 15
COL2A1-208ENST00000493991 ZCCHC6Q5VYS8 1495 aaKnown RBP17.48■□□□□ 0.39
COL2A1-208ENST00000493991 HRCP23327 699 aa17.36■□□□□ 0.37
COL2A1-208ENST00000493991 UBTFP17480 764 aaKnown RBP17.29■□□□□ 0.36
COL2A1-208ENST00000493991 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
COL2A1-208ENST00000493991 MYO15BQ96JP2 1530 aa17.15■□□□□ 0.34
COL2A1-208ENST00000493991 CCDC180Q9P1Z9 1646 aa17.11■□□□□ 0.33
COL2A1-208ENST00000493991 APLP2Q06481 763 aa17.08■□□□□ 0.33
COL2A1-208ENST00000493991 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
COL2A1-208ENST00000493991 CCER1Q8TC90 406 aaPredicted RBP17.04■□□□□ 0.32
COL2A1-208ENST00000493991 ATP1B4Q9UN42 357 aaPredicted RBP17.01■□□□□ 0.31
COL2A1-208ENST00000493991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.3
COL2A1-208ENST00000493991 RSF1Q96T23 1441 aaPredicted RBP16.85■□□□□ 0.29
COL2A1-208ENST00000493991 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
COL2A1-208ENST00000493991 ITGAEP38570 1179 aa16.8■□□□□ 0.28
COL2A1-208ENST00000493991 CECR2Q9BXF3 1484 aa16.79■□□□□ 0.28
COL2A1-208ENST00000493991 PELP1Q8IZL8 1130 aaKnown RBP16.78■□□□□ 0.28
COL2A1-208ENST00000493991 YTHDC1Q96MU7 727 aaKnown RBP16.75■□□□□ 0.27
COL2A1-208ENST00000493991 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
COL2A1-208ENST00000493991 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
COL2A1-208ENST00000493991 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.23
COL2A1-208ENST00000493991 P3H3Q8IVL6 736 aa16.5■□□□□ 0.23
COL2A1-208ENST00000493991 CENPBP07199 599 aaPredicted RBP16.5■□□□□ 0.23
COL2A1-208ENST00000493991 MROH2BQ7Z745 1585 aa16.49■□□□□ 0.23
COL2A1-208ENST00000493991 RB1CC1Q8TDY2 1594 aa16.47■□□□□ 0.23
COL2A1-208ENST00000493991 NACADO15069 1562 aa16.42■□□□□ 0.22
COL2A1-208ENST00000493991 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
COL2A1-208ENST00000493991 ARID3CA6NKF2 412 aa16.38■□□□□ 0.21
COL2A1-208ENST00000493991 GTF3C3Q9Y5Q9 886 aa16.38■□□□□ 0.21
COL2A1-208ENST00000493991 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
COL2A1-208ENST00000493991 DIEXFQ68CQ4 756 aaKnown RBP16.29■□□□□ 0.2
COL2A1-208ENST00000493991 SOGA1O94964 1423 aa16.28■□□□□ 0.2
COL2A1-208ENST00000493991 WIZO95785 1651 aa16.26■□□□□ 0.19
COL2A1-208ENST00000493991 ABCC8Q09428 1581 aa16.25■□□□□ 0.19
COL2A1-208ENST00000493991 CNGB1Q14028 1251 aaPredicted RBP16.23■□□□□ 0.19
COL2A1-208ENST00000493991 NEUROD1Q13562 356 aa16.22■□□□□ 0.19
COL2A1-208ENST00000493991 CCDC88BA6NC98 1476 aa16.19■□□□□ 0.18
COL2A1-208ENST00000493991 FBLN2P98095 1184 aa16.18■□□□□ 0.18
COL2A1-208ENST00000493991 BAZ1AQ9NRL2 1556 aaPredicted RBP16.18■□□□□ 0.18
COL2A1-208ENST00000493991 ACIN1Q9UKV3 1341 aaKnown RBP16.16■□□□□ 0.18
COL2A1-208ENST00000493991 WRNQ14191 1432 aaPredicted RBP eCLIP16.16■□□□□ 0.18
COL2A1-208ENST00000493991 CEP162Q5TB80 1403 aa16.14■□□□□ 0.17
COL2A1-208ENST00000493991 MYT1Q01538 1121 aa16.13■□□□□ 0.17
COL2A1-208ENST00000493991 BAZ1BQ9UIG0 1483 aaKnown RBP16.12■□□□□ 0.17
COL2A1-208ENST00000493991 RUSC2Q8N2Y8 1516 aa16.06■□□□□ 0.16
COL2A1-208ENST00000493991 CLIP1P30622 1438 aa16.05■□□□□ 0.16
COL2A1-208ENST00000493991 POLR3GLQ9BT43 218 aa16.05■□□□□ 0.16
COL2A1-208ENST00000493991 ZNF316A6NFI3 1004 aaPredicted RBP15.97■□□□□ 0.15
COL2A1-208ENST00000493991 TRIM52Q96A61 297 aa15.97■□□□□ 0.15
COL2A1-208ENST00000493991 TNIKQ9UKE5 1360 aa15.93■□□□□ 0.14
COL2A1-208ENST00000493991 BCANQ96GW7 911 aa15.93■□□□□ 0.14
COL2A1-208ENST00000493991 HIRIP3Q9BW71 556 aaPredicted RBP15.93■□□□□ 0.14
COL2A1-208ENST00000493991 GOLGA3Q08378 1498 aa15.92■□□□□ 0.14
COL2A1-208ENST00000493991 CHIC2Q9UKJ5 165 aa15.9■□□□□ 0.14
COL2A1-208ENST00000493991 KANK4Q5T7N3 995 aaPredicted RBP15.89■□□□□ 0.13
COL2A1-208ENST00000493991 MYT1LQ9UL68 1186 aa15.86■□□□□ 0.13
COL2A1-208ENST00000493991 ZNF777Q9ULD5 760 aaPredicted RBP15.85■□□□□ 0.13
COL2A1-208ENST00000493991 SMARCA4P51532 1647 aa15.85■□□□□ 0.13
COL2A1-208ENST00000493991 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
COL2A1-208ENST00000493991 ZNF326Q5BKZ1 582 aaKnown RBP15.85■□□□□ 0.13
COL2A1-208ENST00000493991 ATAD2BQ9ULI0 1458 aa15.85■□□□□ 0.13
COL2A1-208ENST00000493991 MIER1Q8N108 512 aa15.83■□□□□ 0.12
COL2A1-208ENST00000493991 EEA1Q15075 1411 aa15.8■□□□□ 0.12
COL2A1-208ENST00000493991 CEP164Q9UPV0 1460 aa15.79■□□□□ 0.12
COL2A1-208ENST00000493991 KIF27Q86VH2 1401 aa15.77■□□□□ 0.11
COL2A1-208ENST00000493991 RAPGEF2Q9Y4G8 1499 aa15.75■□□□□ 0.11
COL2A1-208ENST00000493991 CUX2O14529 1486 aa15.75■□□□□ 0.11
COL2A1-208ENST00000493991 SMARCA2P51531 1590 aa15.73■□□□□ 0.11
COL2A1-208ENST00000493991 DDX10Q13206 875 aaKnown RBP15.73■□□□□ 0.11
COL2A1-208ENST00000493991 RRP7BPQ9NSQ0 103 aa15.72■□□□□ 0.11
COL2A1-208ENST00000493991 SIN3AQ96ST3 1273 aa15.71■□□□□ 0.11
COL2A1-208ENST00000493991 TDRD9Q8NDG6 1382 aaKnown RBP15.7■□□□□ 0.1
COL2A1-208ENST00000493991 ERICH6Q7L0X2 663 aa15.7■□□□□ 0.1
COL2A1-208ENST00000493991 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
COL2A1-208ENST00000493991 CARMIL1Q5VZK9 1371 aa15.68■□□□□ 0.1
COL2A1-208ENST00000493991 NEFLP07196 543 aa15.66■□□□□ 0.1
COL2A1-208ENST00000493991 MTUS2Q5JR59 1369 aa15.65■□□□□ 0.1
COL2A1-208ENST00000493991 CHMP7Q8WUX9 453 aaPredicted RBP15.62■□□□□ 0.09
COL2A1-208ENST00000493991 VPS8Q8N3P4 1428 aa15.61■□□□□ 0.09
COL2A1-208ENST00000493991 SENP3-EIF4A1A0A087X0R7 540 aa15.6■□□□□ 0.09
COL2A1-208ENST00000493991 CADPSQ9ULU8 1353 aa15.57■□□□□ 0.08
COL2A1-208ENST00000493991 ANP32CO43423 234 aa15.52■□□□□ 0.08
COL2A1-208ENST00000493991 TONSLQ96HA7 1378 aa15.52■□□□□ 0.08
COL2A1-208ENST00000493991 CCNB3Q8WWL7 1395 aa15.51■□□□□ 0.07
COL2A1-208ENST00000493991 BICRAQ9NZM4 1560 aa15.51■□□□□ 0.07
COL2A1-208ENST00000493991 FOXD1Q16676 465 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms