RNA–Protein interactions for RNA: ENST00000505548.5

UBE2D2-205, Transcript of ubiquitin conjugating enzyme E2 D2, humanhuman

TSL 1 (best) BASIC

Gene UBE2D2, Length 1,113 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D2-205ENST00000505548 NISCHQ9Y2I1 1504 aa59.44■■■■■ 7.11
UBE2D2-205ENST00000505548 CCDC180Q9P1Z9 1646 aa52.91■■■■■ 6.06
UBE2D2-205ENST00000505548 ABCC9O60706 1549 aa52.06■■■■■ 5.92
UBE2D2-205ENST00000505548 RB1CC1Q8TDY2 1594 aa49.95■■■■■ 5.59
UBE2D2-205ENST00000505548 DCAF8L2P0C7V8 631 aa49.94■■■■■ 5.59
UBE2D2-205ENST00000505548 NACADO15069 1562 aa49.83■■■■■ 5.57
UBE2D2-205ENST00000505548 ZCCHC6Q5VYS8 1495 aaKnown RBP49.43■■■■■ 5.5
UBE2D2-205ENST00000505548 MYO15BQ96JP2 1530 aa49.39■■■■■ 5.5
UBE2D2-205ENST00000505548 DCAF1Q9Y4B6 1507 aa49.12■■■■■ 5.45
UBE2D2-205ENST00000505548 UNC13AQ9UPW8 1703 aa48.8■■■■■ 5.4
UBE2D2-205ENST00000505548 PABPN1Q86U42 306 aaKnown RBP eCLIP48.66■■■■■ 5.38
UBE2D2-205ENST00000505548 BICRAQ9NZM4 1560 aa48.4■■■■■ 5.34
UBE2D2-205ENST00000505548 SCRIBQ14160 1630 aa48.32■■■■■ 5.33
UBE2D2-205ENST00000505548 DNAJC5BQ9UF47 199 aa47.98■■■■■ 5.27
UBE2D2-205ENST00000505548 SHROOM4Q9ULL8 1493 aa47.84■■■■■ 5.25
UBE2D2-205ENST00000505548 EIF4G1Q04637 1599 aaKnown RBP47.17■■■■■ 5.14
UBE2D2-205ENST00000505548 CC2D2AQ9P2K1 1620 aa47.05■■■■■ 5.12
UBE2D2-205ENST00000505548 CECR2Q9BXF3 1484 aa46.79■■■■■ 5.08
UBE2D2-205ENST00000505548 SMARCA4P51532 1647 aa46.16■■■■■ 4.98
UBE2D2-205ENST00000505548 BAZ1AQ9NRL2 1556 aaPredicted RBP46.09■■■■■ 4.97
UBE2D2-205ENST00000505548 ATAD2BQ9ULI0 1458 aa45.98■■■■■ 4.95
UBE2D2-205ENST00000505548 NCAPD3P42695 1498 aa45.97■■■■■ 4.95
UBE2D2-205ENST00000505548 SMARCA2P51531 1590 aa45.91■■■■■ 4.94
UBE2D2-205ENST00000505548 MROH2BQ7Z745 1585 aa45.81■■■■■ 4.92
UBE2D2-205ENST00000505548 HMGXB3Q12766 1538 aa45.7■■■■■ 4.91
UBE2D2-205ENST00000505548 PEG3Q9GZU2 1588 aa45.67■■■■■ 4.9
UBE2D2-205ENST00000505548 BAZ1BQ9UIG0 1483 aaKnown RBP45.61■■■■■ 4.89
UBE2D2-205ENST00000505548 WIZO95785 1651 aa45.33■■■■■ 4.85
UBE2D2-205ENST00000505548 RSF1Q96T23 1441 aaPredicted RBP45.21■■■■■ 4.83
UBE2D2-205ENST00000505548 NESP48681 1621 aa44.97■■■■■ 4.79
UBE2D2-205ENST00000505548 ERCC6Q03468 1493 aa44.91■■■■■ 4.78
UBE2D2-205ENST00000505548 LAMC3Q9Y6N6 1575 aa44.8■■■■■ 4.76
UBE2D2-205ENST00000505548 TOP2AP11388 1531 aaKnown RBP44.8■■■■■ 4.76
UBE2D2-205ENST00000505548 CADPSQ9ULU8 1353 aa44.66■■■■■ 4.74
UBE2D2-205ENST00000505548 PDS5BQ9NTI5 1447 aa44.55■■■■■ 4.72
UBE2D2-205ENST00000505548 CUX2O14529 1486 aa44.45■■■■■ 4.71
UBE2D2-205ENST00000505548 KIF21AQ7Z4S6 1674 aa44.42■■■■■ 4.7
UBE2D2-205ENST00000505548 CCDC88BA6NC98 1476 aa44.31■■■■■ 4.68
UBE2D2-205ENST00000505548 CFTRP13569 1480 aa44.31■■■■■ 4.68
UBE2D2-205ENST00000505548 THOC2Q8NI27 1593 aaKnown RBP44.28■■■■■ 4.68
UBE2D2-205ENST00000505548 FANCD2Q9BXW9 1451 aa44.15■■■■■ 4.66
UBE2D2-205ENST00000505548 CEP164Q9UPV0 1460 aa44.1■■■■■ 4.65
UBE2D2-205ENST00000505548 MRC2Q9UBG0 1479 aa44.08■■■■■ 4.65
UBE2D2-205ENST00000505548 SUPT5HO00267 1087 aaKnown RBP44.04■■■■■ 4.64
UBE2D2-205ENST00000505548 PRDM2Q13029 1718 aa43.96■■■■■ 4.63
UBE2D2-205ENST00000505548 WDR62O43379 1518 aa43.91■■■■■ 4.62
UBE2D2-205ENST00000505548 URB2Q14146 1524 aaKnown RBP43.68■■■■■ 4.58
UBE2D2-205ENST00000505548 TOPBP1Q92547 1522 aa43.4■■■■■ 4.54
UBE2D2-205ENST00000505548 ABCC8Q09428 1581 aa43.39■■■■■ 4.54
UBE2D2-205ENST00000505548 DNAJC5Q9H3Z4 198 aa43.39■■■■■ 4.54
UBE2D2-205ENST00000505548 DNMBPQ6XZF7 1577 aa43.32■■■■■ 4.52
UBE2D2-205ENST00000505548 IFT140Q96RY7 1462 aa43.19■■■■■ 4.5
UBE2D2-205ENST00000505548 ZNF608Q9ULD9 1512 aaPredicted RBP43.01■■■■■ 4.48
UBE2D2-205ENST00000505548 POLA1P09884 1462 aaPredicted RBP43■■■■■ 4.47
UBE2D2-205ENST00000505548 CUX1P39880 1505 aa42.98■■■■■ 4.47
UBE2D2-205ENST00000505548 TARBP1Q13395 1621 aaKnown RBP42.92■■■■■ 4.46
UBE2D2-205ENST00000505548 FGD5Q6ZNL6 1462 aa42.89■■■■■ 4.46
UBE2D2-205ENST00000505548 SOGA1O94964 1423 aa42.88■■■■■ 4.46
UBE2D2-205ENST00000505548 RAD54L2Q9Y4B4 1467 aa42.87■■■■■ 4.45
UBE2D2-205ENST00000505548 EIF4G3O43432 1585 aaKnown RBP42.81■■■■■ 4.44
UBE2D2-205ENST00000505548 AQRO60306 1485 aaKnown RBP eCLIP42.77■■■■■ 4.443e-8■■■□□ 19.1
UBE2D2-205ENST00000505548 TDRD9Q8NDG6 1382 aaKnown RBP42.67■■■■■ 4.42
UBE2D2-205ENST00000505548 WRNQ14191 1432 aaPredicted RBP eCLIP42.66■■■■■ 4.42
UBE2D2-205ENST00000505548 OSCARQ8IYS5 282 aa42.66■■■■■ 4.42
UBE2D2-205ENST00000505548 TOP2BQ02880 1626 aa42.55■■■■■ 4.4
UBE2D2-205ENST00000505548 WDR97A6NE52 1622 aa42.54■■■■■ 4.4
UBE2D2-205ENST00000505548 SYNJ1O43426 1573 aa42.54■■■■■ 4.4
UBE2D2-205ENST00000505548 BIVM-ERCC5R4GMW8 1640 aa42.53■■■■■ 4.4
UBE2D2-205ENST00000505548 ABCA10Q8WWZ4 1543 aa42.45■■■■■ 4.39
UBE2D2-205ENST00000505548 FBLN2P98095 1184 aa42.4■■■■■ 4.38
UBE2D2-205ENST00000505548 GRIN2BQ13224 1484 aa42.37■■■■■ 4.37
UBE2D2-205ENST00000505548 GAPVD1Q14C86 1478 aa42.36■■■■■ 4.37
UBE2D2-205ENST00000505548 SNAPC4Q5SXM2 1469 aa42.35■■■■■ 4.37
UBE2D2-205ENST00000505548 CHD1O14646 1710 aa42.34■■■■■ 4.37
UBE2D2-205ENST00000505548 ABCA5Q8WWZ7 1642 aa42.28■■■■■ 4.36
UBE2D2-205ENST00000505548 MAGI1Q96QZ7 1491 aaPredicted RBP42.27■■■■■ 4.36
UBE2D2-205ENST00000505548 PBRM1Q86U86 1689 aa42.26■■■■■ 4.36
UBE2D2-205ENST00000505548 CHMP7Q8WUX9 453 aaPredicted RBP42.21■■■■■ 4.35
UBE2D2-205ENST00000505548 SYNJ2O15056 1496 aa42.11■■■■■ 4.33
UBE2D2-205ENST00000505548 TRIM41Q8WV44 630 aa41.96■■■■■ 4.31
UBE2D2-205ENST00000505548 ERICH3Q5RHP9 1530 aa41.93■■■■■ 4.3
UBE2D2-205ENST00000505548 RIMBP3CA6NJZ7 1639 aa41.92■■■■■ 4.3
UBE2D2-205ENST00000505548 RIMBP3BA6NNM3 1639 aa41.92■■■■■ 4.3
UBE2D2-205ENST00000505548 RIMBP3Q9UFD9 1639 aa41.92■■■■■ 4.3
UBE2D2-205ENST00000505548 ADAMTS12P58397 1594 aa41.9■■■■■ 4.3
UBE2D2-205ENST00000505548 ARHGEF11O15085 1522 aa41.9■■■■■ 4.3
UBE2D2-205ENST00000505548 FHAD1B1AJZ9 1412 aa41.86■■■■■ 4.29
UBE2D2-205ENST00000505548 CLASP1Q7Z460 1538 aa41.84■■■■■ 4.29
UBE2D2-205ENST00000505548 GRIN2AQ12879 1464 aa41.82■■■■■ 4.29
UBE2D2-205ENST00000505548 KIF27Q86VH2 1401 aa41.8■■■■■ 4.28
UBE2D2-205ENST00000505548 IGF1RP08069 1367 aa41.64■■■■■ 4.26
UBE2D2-205ENST00000505548 CYB5RLQ6IPT4 315 aa41.62■■■■■ 4.25
UBE2D2-205ENST00000505548 NUP160Q12769 1436 aa41.61■■■■■ 4.25
UBE2D2-205ENST00000505548 CEP170Q5SW79 1584 aa41.61■■■■■ 4.25
UBE2D2-205ENST00000505548 ARAP1Q96P48 1450 aa41.53■■■■■ 4.24
UBE2D2-205ENST00000505548 CUL7Q14999 1698 aa41.52■■■■■ 4.24
UBE2D2-205ENST00000505548 CARMIL1Q5VZK9 1371 aa41.41■■■■■ 4.22
UBE2D2-205ENST00000505548 RUSC2Q8N2Y8 1516 aa41.35■■■■■ 4.21
UBE2D2-205ENST00000505548 SHROOM2Q13796 1616 aa41.32■■■■■ 4.2
UBE2D2-205ENST00000505548 JPH4Q96JJ6 628 aa41.28■■■■■ 4.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms